EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000017620 (Gene tree)
Gene ID: 105012916
Gene Symbol: srsf2b
Alias: wu:fc07d01|zgc:55876|zgc:77420
Full Name: serine/arginine-rich splicing factor 2
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 5649 bases
Position: chrLG11:28940886-28946534
Accession: 105012916
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000018040	RRM_1	PF00076.22	7e-22	1	1
ENSELUP00000018045	RRM_1	PF00076.22	7e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000027816	-	1549	XM_010874074	ENSELUP00000018045	220 (aa)	XP_010872376	UPI000973437E
ENSELUT00000027815	-	4152	XM_020051086	ENSELUP00000018040	220 (aa)	XP_019906645	UPI000973437E

Gene Model

Click here to download ENSELUG00000017620's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03040	Spliceosome	KEGG
els05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000017620's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000017620	srsf2b	89	38.605	ENSELUG00000018155	srsf7b	63	33.981

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000017620	srsf2b	85	63.298	ENSDARG00000057484	srsf2a	85	97.000	Danio_rerio
ENSELUG00000017620	srsf2b	55	55.469	ENSHGLG00100012221	-	81	54.545	Heterocephalus_glaber_male
ENSELUG00000017620	srsf2b	67	61.224	ENSOARG00000018667	-	50	73.000	Ovis_aries
ENSELUG00000017620	srsf2b	67	61.224	ENSOARG00000018359	-	50	73.000	Ovis_aries
ENSELUG00000017620	srsf2b	69	63.226	ENSSSCG00000012212	-	51	77.000	Sus_scrofa