EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSELUG00000017642 (Gene tree)
Gene ID
105026293
Gene Symbol
zgc:171971
Alias
-
Full Name
DNA-directed RNA polymerase III subunit RPC4
Gene Type
protein_coding
Species
Esox_lucius
Status
putative
Strand
Minus strand
Length
3732 bases
Position
chrLG06:21848742-21852473
Accession
105026293
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSELUP00000037887RNA_pol_Rpc4PF05132.145.2e-2711
ENSELUP00000018057RNA_pol_Rpc4PF05132.147e-2711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSELUT00000027828-1313XM_020047024ENSELUP00000018057416 (aa)XP_019902583UPI0005762597
ENSELUT00000027842-1191-ENSELUP00000037887396 (aa)--
Gene Model
Click here to download ENSELUG00000017642's gene model file
Pathways
Pathway IDPathway NameSource
els03020RNA polymeraseKEGG
els04623Cytosolic DNA-sensing pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000017642's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSELUG00000017642zgc:1719719539.853ENSELUG00000016978polr3d9941.626
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSELUG00000017642zgc:1719719144.872ENSG00000168495POLR3D9545.185Homo_sapiens
ENSELUG00000017642zgc:1719719057.256ENSAPOG00000017634zgc:1719719454.815Acanthochromis_polyacanthus
ENSELUG00000017642zgc:1719718640.108ENSAPOG00000012197polr3d9040.390Acanthochromis_polyacanthus
ENSELUG00000017642zgc:1719719144.103ENSAMEG00000003221POLR3D9444.615Ailuropoda_melanoleuca
ENSELUG00000017642zgc:1719719239.594ENSACIG00000017832polr3d9539.500Amphilophus_citrinellus
ENSELUG00000017642zgc:1719719550.123ENSACIG00000003707zgc:1719719752.228Amphilophus_citrinellus
ENSELUG00000017642zgc:1719719057.909ENSAOCG00000007733zgc:1719719357.106Amphiprion_ocellaris
ENSELUG00000017642zgc:1719718640.496ENSAOCG00000005037polr3d9041.226Amphiprion_ocellaris
ENSELUG00000017642zgc:1719718640.921ENSAPEG00000013751polr3d9040.947Amphiprion_percula
ENSELUG00000017642zgc:1719719057.951ENSAPEG00000016107zgc:1719719655.970Amphiprion_percula
ENSELUG00000017642zgc:1719719058.311ENSATEG00000023125zgc:1719719753.808Anabas_testudineus
ENSELUG00000017642zgc:1719718741.370ENSATEG00000023119polr3d9141.067Anabas_testudineus
ENSELUG00000017642zgc:1719718141.714ENSAPLG00000014393POLR3D9940.571Anas_platyrhynchos
ENSELUG00000017642zgc:1719718241.783ENSACAG00000010592POLR3D9040.730Anolis_carolinensis
ENSELUG00000017642zgc:1719719144.615ENSANAG00000030023POLR3D9544.938Aotus_nancymaae
ENSELUG00000017642zgc:1719718641.892ENSACLG00000010147polr3d9042.077Astatotilapia_calliptera
ENSELUG00000017642zgc:1719719357.254ENSACLG00000000074zgc:1719719660.104Astatotilapia_calliptera
ENSELUG00000017642zgc:1719719160.773ENSAMXG00000019418zgc:1719719361.326Astyanax_mexicanus
ENSELUG00000017642zgc:1719718643.048ENSAMXG00000010079polr3d8842.162Astyanax_mexicanus
ENSELUG00000017642zgc:1719719143.846ENSBTAG00000010036POLR3D9544.275Bos_taurus
ENSELUG00000017642zgc:1719719144.615ENSCJAG00000020278POLR3D8844.938Callithrix_jacchus
ENSELUG00000017642zgc:1719719143.590ENSCAFG00000009455POLR3D9544.103Canis_familiaris
ENSELUG00000017642zgc:1719719143.590ENSCAFG00020013027POLR3D9544.103Canis_lupus_dingo
ENSELUG00000017642zgc:1719719144.103ENSCHIG00000012279POLR3D9544.246Capra_hircus
ENSELUG00000017642zgc:1719719144.588ENSTSYG00000009055POLR3D9544.588Carlito_syrichta
ENSELUG00000017642zgc:1719718343.099ENSCAPG00000010394POLR3D9743.288Cavia_aperea
ENSELUG00000017642zgc:1719719144.588ENSCPOG00000003679POLR3D9544.975Cavia_porcellus
ENSELUG00000017642zgc:1719719144.615ENSCCAG00000019817POLR3D9545.000Cebus_capucinus
ENSELUG00000017642zgc:1719719144.987ENSCATG00000025950POLR3D9545.960Cercocebus_atys
ENSELUG00000017642zgc:1719719144.330ENSCLAG00000014993POLR3D9544.330Chinchilla_lanigera
ENSELUG00000017642zgc:1719719144.730ENSCSAG00000016525POLR3D9545.707Chlorocebus_sabaeus
ENSELUG00000017642zgc:1719716567.105ENSCHOG00000000228POLR3D9739.901Choloepus_hoffmanni
ENSELUG00000017642zgc:1719719542.721ENSCPBG00000001313POLR3D9942.892Chrysemys_picta_bellii
ENSELUG00000017642zgc:1719718632.869ENSCING00000008141-9533.594Ciona_intestinalis
ENSELUG00000017642zgc:1719718932.698ENSCSAVG00000007119-9332.970Ciona_savignyi
ENSELUG00000017642zgc:1719719144.987ENSCANG00000043589POLR3D9545.707Colobus_angolensis_palliatus
ENSELUG00000017642zgc:1719719144.615ENSCGRG00001010339Polr3d9544.872Cricetulus_griseus_chok1gshd
ENSELUG00000017642zgc:1719719144.615ENSCGRG00000003956Polr3d9544.872Cricetulus_griseus_crigri
ENSELUG00000017642zgc:1719718741.240ENSCSEG00000008123polr3d9940.199Cynoglossus_semilaevis
ENSELUG00000017642zgc:1719718756.160ENSCSEG00000015509zgc:1719718756.160Cynoglossus_semilaevis
ENSELUG00000017642zgc:1719718747.564ENSCVAG00000009078-9146.132Cyprinodon_variegatus
ENSELUG00000017642zgc:1719719539.241ENSCVAG00000020687polr3d9839.000Cyprinodon_variegatus
ENSELUG00000017642zgc:1719718641.047ENSDARG00000104516polr3d9641.316Danio_rerio
ENSELUG00000017642zgc:1719719959.398ENSDARG00000042054zgc:1719719959.398Danio_rerio
ENSELUG00000017642zgc:1719719143.590ENSDNOG00000013488POLR3D9543.590Dasypus_novemcinctus
ENSELUG00000017642zgc:1719719144.359ENSDORG00000011174Polr3d9544.500Dipodomys_ordii
ENSELUG00000017642zgc:1719719143.445ENSETEG00000016516POLR3D9544.192Echinops_telfairi
ENSELUG00000017642zgc:1719717733.711ENSEBUG00000014414polr3d9034.385Eptatretus_burgeri
ENSELUG00000017642zgc:1719719143.333ENSEASG00005018824POLR3D9543.590Equus_asinus_asinus
ENSELUG00000017642zgc:1719719144.359ENSECAG00000025090-9544.615Equus_caballus
ENSELUG00000017642zgc:1719719144.359ENSEEUG00000007632POLR3D9544.359Erinaceus_europaeus
ENSELUG00000017642zgc:1719719244.030ENSFCAG00000005346POLR3D9643.781Felis_catus
ENSELUG00000017642zgc:1719718143.642ENSFALG00000010907POLR3D9943.064Ficedula_albicollis
ENSELUG00000017642zgc:1719719344.153ENSFDAG00000010144POLR3D9844.444Fukomys_damarensis
ENSELUG00000017642zgc:1719719539.295ENSFHEG00000000508polr3d9840.150Fundulus_heteroclitus
ENSELUG00000017642zgc:1719718749.582ENSFHEG00000003803-8949.025Fundulus_heteroclitus
ENSELUG00000017642zgc:1719719353.908ENSGMOG00000015819zgc:1719719453.100Gadus_morhua
ENSELUG00000017642zgc:1719718841.935ENSGMOG00000006293polr3d9942.204Gadus_morhua
ENSELUG00000017642zgc:1719718441.226ENSGALG00000032501-6243.408Gallus_gallus
ENSELUG00000017642zgc:1719718651.841ENSGAFG00000009259zgc:1719719051.111Gambusia_affinis
ENSELUG00000017642zgc:1719719540.302ENSGAFG00000010268polr3d9840.704Gambusia_affinis
ENSELUG00000017642zgc:1719718940.576ENSGACG00000011126polr3d9441.689Gasterosteus_aculeatus
ENSELUG00000017642zgc:1719719056.218ENSGACG00000015436zgc:1719719954.157Gasterosteus_aculeatus
ENSELUG00000017642zgc:1719719542.093ENSGAGG00000023229POLR3D9942.254Gopherus_agassizii
ENSELUG00000017642zgc:1719718645.553ENSGGOG00000007302POLR3D9444.444Gorilla_gorilla
ENSELUG00000017642zgc:1719719355.381ENSHBUG00000020493zgc:1719719660.177Haplochromis_burtoni
ENSELUG00000017642zgc:1719718642.162ENSHBUG00000012288polr3d9042.350Haplochromis_burtoni
ENSELUG00000017642zgc:1719719146.753ENSHGLG00000015415POLR3D9546.753Heterocephalus_glaber_female
ENSELUG00000017642zgc:1719719146.753ENSHGLG00100014950POLR3D9546.753Heterocephalus_glaber_male
ENSELUG00000017642zgc:1719718840.526ENSHCOG00000002228polr3d9440.691Hippocampus_comes
ENSELUG00000017642zgc:1719719445.855ENSHCOG00000018819-9645.596Hippocampus_comes
ENSELUG00000017642zgc:1719719241.397ENSIPUG00000003480polr3d9741.310Ictalurus_punctatus
ENSELUG00000017642zgc:1719719460.209ENSIPUG00000008608zgc:1719719659.948Ictalurus_punctatus
ENSELUG00000017642zgc:1719719244.988ENSSTOG00000016519POLR3D9745.813Ictidomys_tridecemlineatus
ENSELUG00000017642zgc:1719719144.330ENSJJAG00000006743Polr3d9544.416Jaculus_jaculus
ENSELUG00000017642zgc:1719718641.111ENSKMAG00000005145polr3d9041.944Kryptolebias_marmoratus
ENSELUG00000017642zgc:1719718640.431ENSLBEG00000003430polr3d9040.970Labrus_bergylta
ENSELUG00000017642zgc:1719719553.902ENSLBEG00000009545zgc:1719719756.927Labrus_bergylta
ENSELUG00000017642zgc:1719718744.444ENSLACG00000016654POLR3D9145.093Latimeria_chalumnae
ENSELUG00000017642zgc:1719719539.720ENSLOCG00000016080polr3d9939.344Lepisosteus_oculatus
ENSELUG00000017642zgc:1719719758.040ENSLOCG00000006467zgc:1719719958.794Lepisosteus_oculatus
ENSELUG00000017642zgc:1719719243.890ENSLAFG00000001562POLR3D9744.389Loxodonta_africana
ENSELUG00000017642zgc:1719719144.987ENSMFAG00000029141POLR3D9545.960Macaca_fascicularis
ENSELUG00000017642zgc:1719719144.987ENSMMUG00000023226POLR3D9545.960Macaca_mulatta
ENSELUG00000017642zgc:1719719144.987ENSMNEG00000039410POLR3D9545.960Macaca_nemestrina
ENSELUG00000017642zgc:1719719144.987ENSMLEG00000031413POLR3D9545.960Mandrillus_leucophaeus
ENSELUG00000017642zgc:1719718740.107ENSMAMG00000008914polr3d9040.548Mastacembelus_armatus
ENSELUG00000017642zgc:1719719053.083ENSMAMG00000020617zgc:1719719752.120Mastacembelus_armatus
ENSELUG00000017642zgc:1719719357.254ENSMZEG00005003175zgc:1719719660.104Maylandia_zebra
ENSELUG00000017642zgc:1719718641.892ENSMZEG00005011442polr3d9042.077Maylandia_zebra
ENSELUG00000017642zgc:1719719144.872ENSMAUG00000006844Polr3d9544.872Mesocricetus_auratus
ENSELUG00000017642zgc:1719719143.959ENSMICG00000001049POLR3D9544.697Microcebus_murinus
ENSELUG00000017642zgc:1719719144.103ENSMOCG00000005195Polr3d9544.103Microtus_ochrogaster
ENSELUG00000017642zgc:1719718642.500ENSMMOG00000013845polr3d9042.500Mola_mola
ENSELUG00000017642zgc:1719718445.946ENSMODG00000009491POLR3D9145.479Monodelphis_domestica
ENSELUG00000017642zgc:1719719438.631ENSMALG00000002928polr3d9739.259Monopterus_albus
ENSELUG00000017642zgc:1719719556.373ENSMALG00000005659zgc:1719719756.829Monopterus_albus
ENSELUG00000017642zgc:1719719144.615MGP_CAROLIEiJ_G0019481Polr3d9544.615Mus_caroli
ENSELUG00000017642zgc:1719719144.615ENSMUSG00000000776Polr3d9544.615Mus_musculus
ENSELUG00000017642zgc:1719719142.821MGP_PahariEiJ_G0030498Polr3d9542.821Mus_pahari
ENSELUG00000017642zgc:1719719144.872MGP_SPRETEiJ_G0020373Polr3d9544.872Mus_spretus
ENSELUG00000017642zgc:1719719144.103ENSMPUG00000003653POLR3D9544.615Mustela_putorius_furo
ENSELUG00000017642zgc:1719718644.764ENSMLUG00000002109POLR3D9045.232Myotis_lucifugus
ENSELUG00000017642zgc:1719719144.359ENSNGAG00000013872Polr3d9744.250Nannospalax_galili
ENSELUG00000017642zgc:1719718641.622ENSNBRG00000019106polr3d9042.077Neolamprologus_brichardi
ENSELUG00000017642zgc:1719718148.788ENSNBRG00000022951zgc:1719718652.727Neolamprologus_brichardi
ENSELUG00000017642zgc:1719718645.822ENSMEUG00000000465POLR3D9045.822Notamacropus_eugenii
ENSELUG00000017642zgc:1719719144.473ENSOPRG00000013146POLR3D9545.063Ochotona_princeps
ENSELUG00000017642zgc:1719719245.250ENSODEG00000005884POLR3D9745.250Octodon_degus
ENSELUG00000017642zgc:1719718957.568ENSONIG00000007280zgc:1719719261.622Oreochromis_niloticus
ENSELUG00000017642zgc:1719719440.000ENSONIG00000010634polr3d9740.648Oreochromis_niloticus
ENSELUG00000017642zgc:1719718941.960ENSOANG00000010776POLR3D9643.216Ornithorhynchus_anatinus
ENSELUG00000017642zgc:1719719144.416ENSOCUG00000017410POLR3D9544.675Oryctolagus_cuniculus
ENSELUG00000017642zgc:1719719340.602ENSORLG00000011583polr3d9941.191Oryzias_latipes
ENSELUG00000017642zgc:1719719339.900ENSORLG00020005668polr3d9940.399Oryzias_latipes_hni
ENSELUG00000017642zgc:1719718640.437ENSORLG00015020291polr3d8940.270Oryzias_latipes_hsok
ENSELUG00000017642zgc:1719718641.667ENSOMEG00000010120polr3d9042.350Oryzias_melastigma
ENSELUG00000017642zgc:1719719144.588ENSOGAG00000004912POLR3D9544.588Otolemur_garnettii
ENSELUG00000017642zgc:1719719144.103ENSOARG00000010372-7544.246Ovis_aries
ENSELUG00000017642zgc:1719716933.217ENSOARG00000009142-9833.217Ovis_aries
ENSELUG00000017642zgc:1719719144.872ENSPPAG00000029591POLR3D9545.185Pan_paniscus
ENSELUG00000017642zgc:1719719244.030ENSPPRG00000022827POLR3D9643.781Panthera_pardus
ENSELUG00000017642zgc:1719719243.687ENSPTIG00000018239POLR3D9643.687Panthera_tigris_altaica
ENSELUG00000017642zgc:1719719144.872ENSPTRG00000020056POLR3D9545.185Pan_troglodytes
ENSELUG00000017642zgc:1719719144.987ENSPANG00000009440POLR3D9545.960Papio_anubis
ENSELUG00000017642zgc:1719719041.542ENSPKIG00000006727polr3d9540.842Paramormyrops_kingsleyae
ENSELUG00000017642zgc:1719719660.859ENSPKIG00000025283zgc:1719719860.688Paramormyrops_kingsleyae
ENSELUG00000017642zgc:1719719539.952ENSPSIG00000006113POLR3D9940.488Pelodiscus_sinensis
ENSELUG00000017642zgc:1719719341.645ENSPMGG00000021658polr3d9941.624Periophthalmus_magnuspinnatus
ENSELUG00000017642zgc:1719719144.872ENSPEMG00000023314Polr3d9544.615Peromyscus_maniculatus_bairdii
ENSELUG00000017642zgc:1719718841.117ENSPMAG00000001455polr3d9242.602Petromyzon_marinus
ENSELUG00000017642zgc:1719718645.845ENSPCIG00000012699POLR3D9045.845Phascolarctos_cinereus
ENSELUG00000017642zgc:1719718652.113ENSPFOG00000011089zgc:1719719051.381Poecilia_formosa
ENSELUG00000017642zgc:1719719539.798ENSPFOG00000012698polr3d9840.452Poecilia_formosa
ENSELUG00000017642zgc:1719719539.547ENSPLAG00000008149polr3d9840.201Poecilia_latipinna
ENSELUG00000017642zgc:1719718644.602ENSPLAG00000003645zgc:1719718744.011Poecilia_latipinna
ENSELUG00000017642zgc:1719718652.113ENSPMEG00000016953zgc:1719719051.381Poecilia_mexicana
ENSELUG00000017642zgc:1719719539.950ENSPMEG00000002702polr3d9840.100Poecilia_mexicana
ENSELUG00000017642zgc:1719718650.141ENSPREG00000003755-9049.448Poecilia_reticulata
ENSELUG00000017642zgc:1719719439.798ENSPREG00000007593polr3d9640.806Poecilia_reticulata
ENSELUG00000017642zgc:1719719144.872ENSPPYG00000018419POLR3D9545.185Pongo_abelii
ENSELUG00000017642zgc:1719719241.855ENSPCAG00000001971POLR3D9741.363Procavia_capensis
ENSELUG00000017642zgc:1719719143.959ENSPCOG00000028134POLR3D9544.473Propithecus_coquereli
ENSELUG00000017642zgc:1719719144.615ENSPVAG00000009873POLR3D9544.615Pteropus_vampyrus
ENSELUG00000017642zgc:1719718552.464ENSPNYG00000008902zgc:1719718855.652Pundamilia_nyererei
ENSELUG00000017642zgc:1719718641.892ENSPNYG00000016306polr3d9042.077Pundamilia_nyererei
ENSELUG00000017642zgc:1719718643.432ENSPNAG00000022324polr3d9042.246Pygocentrus_nattereri
ENSELUG00000017642zgc:1719719261.957ENSPNAG00000018934zgc:1719719660.574Pygocentrus_nattereri
ENSELUG00000017642zgc:1719719144.359ENSRNOG00000010028Polr3d9544.703Rattus_norvegicus
ENSELUG00000017642zgc:1719719145.244ENSRBIG00000035406POLR3D9545.455Rhinopithecus_bieti
ENSELUG00000017642zgc:1719719145.244ENSRROG00000037278POLR3D9545.455Rhinopithecus_roxellana
ENSELUG00000017642zgc:1719719144.615ENSSBOG00000024956POLR3D9545.000Saimiri_boliviensis_boliviensis
ENSELUG00000017642zgc:1719718143.590ENSSHAG00000018257POLR3D9943.380Sarcophilus_harrisii
ENSELUG00000017642zgc:1719718361.357ENSSFOG00015011547zgc:1719719262.537Scleropages_formosus
ENSELUG00000017642zgc:1719719041.538ENSSFOG00015010611polr3d9441.538Scleropages_formosus
ENSELUG00000017642zgc:1719719440.887ENSSMAG00000006271polr3d9840.547Scophthalmus_maximus
ENSELUG00000017642zgc:1719719456.136ENSSMAG00000001465zgc:1719719656.136Scophthalmus_maximus
ENSELUG00000017642zgc:1719719556.235ENSSDUG00000016019zgc:1719719856.479Seriola_dumerili
ENSELUG00000017642zgc:1719719439.454ENSSDUG00000020718polr3d9840.299Seriola_dumerili
ENSELUG00000017642zgc:1719719439.702ENSSLDG00000009643polr3d9840.299Seriola_lalandi_dorsalis
ENSELUG00000017642zgc:1719719556.585ENSSLDG00000015968zgc:1719719856.829Seriola_lalandi_dorsalis
ENSELUG00000017642zgc:1719719242.298ENSSARG00000012844POLR3D9542.278Sorex_araneus
ENSELUG00000017642zgc:1719719543.720ENSSPUG00000000719POLR3D9943.902Sphenodon_punctatus
ENSELUG00000017642zgc:1719719355.467ENSSPAG00000010384zgc:1719719555.733Stegastes_partitus
ENSELUG00000017642zgc:1719719239.646ENSSPAG00000023326polr3d9639.646Stegastes_partitus
ENSELUG00000017642zgc:1719719144.588ENSSSCG00000009622POLR3D9544.588Sus_scrofa
ENSELUG00000017642zgc:1719718940.526ENSTRUG00000003555polr3d9940.050Takifugu_rubripes
ENSELUG00000017642zgc:1719719439.231ENSTNIG00000006282polr3d9939.487Tetraodon_nigroviridis
ENSELUG00000017642zgc:1719719143.814ENSTTRG00000012745POLR3D9544.221Tursiops_truncatus
ENSELUG00000017642zgc:1719718241.690ENSUAMG00000026868POLR3D9342.254Ursus_americanus
ENSELUG00000017642zgc:1719719144.359ENSUMAG00000005099POLR3D9544.872Ursus_maritimus
ENSELUG00000017642zgc:1719719143.590ENSVVUG00000005290POLR3D9544.103Vulpes_vulpes
ENSELUG00000017642zgc:1719719043.511ENSXETG00000010534polr3d9541.985Xenopus_tropicalis
ENSELUG00000017642zgc:1719719540.415ENSXCOG00000015872polr3d9840.674Xiphophorus_couchianus
ENSELUG00000017642zgc:1719718651.275ENSXMAG00000014555-9050.556Xiphophorus_maculatus
ENSELUG00000017642zgc:1719719538.442ENSXMAG00000001872polr3d9839.547Xiphophorus_maculatus

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