EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000017643 (Gene tree)
Gene ID: 105023817
Gene Symbol: srpra
Alias: id:ibd1064|srpr|wu:fd12f02
Full Name: SRP receptor subunit alpha
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 35572 bases
Position: chrLG01:24320782-24356353
Accession: 105023817
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000018088	SRP54	PF00448.22	3.7e-47	1	1
ENSELUP00000037911	SRP54	PF00448.22	3.7e-47	1	1
ENSELUP00000018088	SRP54_N	PF02881.19	2.1e-09	1	1
ENSELUP00000037911	SRP54_N	PF02881.19	2.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000027865	-	2287	XM_010893296	ENSELUP00000018088	651 (aa)	XP_010891598	UPI000577DAE9
ENSELUT00000040444	-	2136	-	ENSELUP00000037911	651 (aa)	-	UPI000577DAE9

Gene Model

Click here to download ENSELUG00000017643's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000017643's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000017643	srpra	100	68.389	ENSG00000182934	SRPRA	100	68.702	Homo_sapiens
ENSELUG00000017643	srpra	100	86.350	ENSAPOG00000017588	srpra	100	84.709	Acanthochromis_polyacanthus
ENSELUG00000017643	srpra	100	68.892	ENSAMEG00000000117	SRPRA	100	68.237	Ailuropoda_melanoleuca
ENSELUG00000017643	srpra	100	81.567	ENSACIG00000021588	srpra	100	81.413	Amphilophus_citrinellus
ENSELUG00000017643	srpra	100	86.503	ENSAOCG00000018884	srpra	100	86.086	Amphiprion_ocellaris
ENSELUG00000017643	srpra	100	86.503	ENSAPEG00000022286	srpra	92	89.759	Amphiprion_percula
ENSELUG00000017643	srpra	100	82.848	ENSATEG00000023578	srpra	92	94.921	Anabas_testudineus
ENSELUG00000017643	srpra	94	71.405	ENSAPLG00000016079	SRPRA	99	71.078	Anas_platyrhynchos
ENSELUG00000017643	srpra	100	70.948	ENSACAG00000000108	SRPRA	100	71.254	Anolis_carolinensis
ENSELUG00000017643	srpra	100	68.855	ENSANAG00000020346	SRPRA	100	68.702	Aotus_nancymaae
ENSELUG00000017643	srpra	100	84.793	ENSACLG00000000518	srpra	100	83.257	Astatotilapia_calliptera
ENSELUG00000017643	srpra	100	73.733	ENSAMXG00000009975	srpra	100	72.811	Astyanax_mexicanus
ENSELUG00000017643	srpra	100	67.933	ENSBTAG00000014105	SRPRA	100	68.589	Bos_taurus
ENSELUG00000017643	srpra	99	49.544	WBGene00009521	F38A1.8	99	48.265	Caenorhabditis_elegans
ENSELUG00000017643	srpra	100	69.008	ENSCJAG00000008752	SRPRA	100	68.196	Callithrix_jacchus
ENSELUG00000017643	srpra	100	67.173	ENSCAFG00000010474	SRPRA	100	67.173	Canis_familiaris
ENSELUG00000017643	srpra	100	68.845	ENSCAFG00020010608	SRPRA	100	68.845	Canis_lupus_dingo
ENSELUG00000017643	srpra	100	69.044	ENSCHIG00000012423	SRPRA	100	68.134	Capra_hircus
ENSELUG00000017643	srpra	85	80.747	ENSTSYG00000005187	SRPRA	90	85.714	Carlito_syrichta
ENSELUG00000017643	srpra	95	66.236	ENSCAPG00000007098	SRPRA	91	87.218	Cavia_aperea
ENSELUG00000017643	srpra	100	68.477	ENSCPOG00000014976	SRPRA	91	87.218	Cavia_porcellus
ENSELUG00000017643	srpra	100	68.381	ENSCCAG00000025602	SRPRA	100	68.079	Cebus_capucinus
ENSELUG00000017643	srpra	100	68.855	ENSCATG00000039354	SRPRA	100	68.855	Cercocebus_atys
ENSELUG00000017643	srpra	100	68.913	ENSCLAG00000016839	SRPRA	100	68.760	Chinchilla_lanigera
ENSELUG00000017643	srpra	100	68.855	ENSCSAG00000002271	SRPRA	100	68.702	Chlorocebus_sabaeus
ENSELUG00000017643	srpra	53	85.714	ENSCHOG00000010015	-	73	85.714	Choloepus_hoffmanni
ENSELUG00000017643	srpra	100	70.840	ENSCPBG00000011128	SRPRA	100	69.138	Chrysemys_picta_bellii
ENSELUG00000017643	srpra	99	57.056	ENSCING00000008954	-	100	58.384	Ciona_intestinalis
ENSELUG00000017643	srpra	99	59.578	ENSCSAVG00000005602	-	100	58.974	Ciona_savignyi
ENSELUG00000017643	srpra	100	68.702	ENSCANG00000032337	SRPRA	100	68.702	Colobus_angolensis_palliatus
ENSELUG00000017643	srpra	100	68.760	ENSCGRG00001017670	Srpr	100	68.760	Cricetulus_griseus_chok1gshd
ENSELUG00000017643	srpra	100	68.760	ENSCGRG00000009892	Srpr	90	87.407	Cricetulus_griseus_crigri
ENSELUG00000017643	srpra	100	83.359	ENSCSEG00000002374	srpra	100	82.344	Cynoglossus_semilaevis
ENSELUG00000017643	srpra	100	82.137	ENSCVAG00000019881	srpra	100	81.431	Cyprinodon_variegatus
ENSELUG00000017643	srpra	100	79.268	ENSDARG00000061124	srpra	100	78.779	Danio_rerio
ENSELUG00000017643	srpra	100	68.835	ENSDNOG00000010821	SRPRA	100	67.976	Dasypus_novemcinctus
ENSELUG00000017643	srpra	100	69.066	ENSDORG00000016719	Srpr	100	69.066	Dipodomys_ordii
ENSELUG00000017643	srpra	99	51.908	FBgn0010391	Gtp-bp	100	52.519	Drosophila_melanogaster
ENSELUG00000017643	srpra	100	67.477	ENSETEG00000013956	SRPRA	100	66.565	Echinops_telfairi
ENSELUG00000017643	srpra	50	81.538	ENSEBUG00000002602	srpra	73	82.222	Eptatretus_burgeri
ENSELUG00000017643	srpra	100	69.091	ENSEASG00005022980	SRPRA	100	67.325	Equus_asinus_asinus
ENSELUG00000017643	srpra	100	69.091	ENSECAG00000014692	SRPRA	100	67.325	Equus_caballus
ENSELUG00000017643	srpra	100	63.733	ENSEEUG00000007920	SRPRA	100	63.110	Erinaceus_europaeus
ENSELUG00000017643	srpra	100	69.512	ENSFCAG00000011274	-	100	68.750	Felis_catus
ENSELUG00000017643	srpra	80	64.015	ENSFCAG00000030894	-	99	62.900	Felis_catus
ENSELUG00000017643	srpra	99	68.210	ENSFALG00000005048	SRPRA	99	67.901	Ficedula_albicollis
ENSELUG00000017643	srpra	100	68.913	ENSFDAG00000016229	SRPRA	92	82.517	Fukomys_damarensis
ENSELUG00000017643	srpra	100	83.461	ENSFHEG00000016959	srpra	100	83.817	Fundulus_heteroclitus
ENSELUG00000017643	srpra	100	82.569	ENSGMOG00000013244	srpra	100	82.722	Gadus_morhua
ENSELUG00000017643	srpra	100	70.444	ENSGALG00000030759	SRPRA	100	70.750	Gallus_gallus
ENSELUG00000017643	srpra	100	84.793	ENSGAFG00000000453	srpra	100	84.839	Gambusia_affinis
ENSELUG00000017643	srpra	100	82.901	ENSGACG00000006550	srpra	100	81.887	Gasterosteus_aculeatus
ENSELUG00000017643	srpra	100	70.992	ENSGAGG00000021157	SRPRA	100	69.440	Gopherus_agassizii
ENSELUG00000017643	srpra	100	68.389	ENSGGOG00000012962	SRPRA	100	68.702	Gorilla_gorilla
ENSELUG00000017643	srpra	100	84.639	ENSHBUG00000000119	srpra	100	83.103	Haplochromis_burtoni
ENSELUG00000017643	srpra	100	68.453	ENSHGLG00000001597	SRPR	94	87.879	Heterocephalus_glaber_female
ENSELUG00000017643	srpra	100	68.453	ENSHGLG00100006449	SRPR	94	87.879	Heterocephalus_glaber_male
ENSELUG00000017643	srpra	100	82.137	ENSHCOG00000010749	srpra	100	82.137	Hippocampus_comes
ENSELUG00000017643	srpra	94	76.661	ENSIPUG00000000867	srpra	99	76.013	Ictalurus_punctatus
ENSELUG00000017643	srpra	100	68.702	ENSSTOG00000009897	SRPRA	100	68.702	Ictidomys_tridecemlineatus
ENSELUG00000017643	srpra	100	68.300	ENSJJAG00000020272	Srpr	100	67.527	Jaculus_jaculus
ENSELUG00000017643	srpra	100	83.945	ENSKMAG00000002280	srpra	100	83.689	Kryptolebias_marmoratus
ENSELUG00000017643	srpra	100	86.963	ENSLBEG00000009608	srpra	100	86.656	Labrus_bergylta
ENSELUG00000017643	srpra	100	69.592	ENSLACG00000017781	SRPRA	100	69.301	Latimeria_chalumnae
ENSELUG00000017643	srpra	100	77.576	ENSLOCG00000002733	srpra	100	76.176	Lepisosteus_oculatus
ENSELUG00000017643	srpra	100	67.939	ENSLAFG00000010252	SRPRA	100	68.326	Loxodonta_africana
ENSELUG00000017643	srpra	100	69.008	ENSMFAG00000032606	SRPRA	100	68.855	Macaca_fascicularis
ENSELUG00000017643	srpra	100	69.008	ENSMMUG00000007938	SRPRA	100	68.855	Macaca_mulatta
ENSELUG00000017643	srpra	100	68.845	ENSMNEG00000030709	SRPRA	100	68.693	Macaca_nemestrina
ENSELUG00000017643	srpra	100	68.855	ENSMLEG00000043404	SRPRA	100	68.855	Mandrillus_leucophaeus
ENSELUG00000017643	srpra	100	83.589	ENSMAMG00000000473	srpra	100	82.416	Mastacembelus_armatus
ENSELUG00000017643	srpra	100	84.793	ENSMZEG00005013432	srpra	100	83.257	Maylandia_zebra
ENSELUG00000017643	srpra	94	70.704	ENSMGAG00000000732	SRPRA	100	70.213	Meleagris_gallopavo
ENSELUG00000017643	srpra	100	68.913	ENSMAUG00000015648	Srpr	100	68.760	Mesocricetus_auratus
ENSELUG00000017643	srpra	100	69.347	ENSMICG00000015981	SRPRA	100	68.997	Microcebus_murinus
ENSELUG00000017643	srpra	100	68.453	ENSMOCG00000008311	Srpr	100	68.453	Microtus_ochrogaster
ENSELUG00000017643	srpra	100	76.263	ENSMMOG00000005019	srpra	89	88.554	Mola_mola
ENSELUG00000017643	srpra	100	68.098	ENSMODG00000004576	-	100	67.841	Monodelphis_domestica
ENSELUG00000017643	srpra	100	86.043	ENSMALG00000011343	srpra	100	85.933	Monopterus_albus
ENSELUG00000017643	srpra	100	68.300	MGP_CAROLIEiJ_G0031951	Srpr	86	88.636	Mus_caroli
ENSELUG00000017643	srpra	100	68.892	ENSMUSG00000032042	Srpr	86	87.879	Mus_musculus
ENSELUG00000017643	srpra	100	68.453	MGP_PahariEiJ_G0014816	Srpr	86	87.879	Mus_pahari
ENSELUG00000017643	srpra	100	64.892	MGP_SPRETEiJ_G0033075	Srpr	100	65.205	Mus_spretus
ENSELUG00000017643	srpra	100	68.997	ENSMPUG00000006626	SRPRA	100	68.541	Mustela_putorius_furo
ENSELUG00000017643	srpra	100	68.702	ENSMLUG00000017334	SRPRA	100	68.702	Myotis_lucifugus
ENSELUG00000017643	srpra	100	68.453	ENSNGAG00000015686	Srpr	100	68.300	Nannospalax_galili
ENSELUG00000017643	srpra	100	84.793	ENSNBRG00000017311	srpra	100	83.257	Neolamprologus_brichardi
ENSELUG00000017643	srpra	99	65.331	ENSNLEG00000007467	SRPRA	100	68.006	Nomascus_leucogenys
ENSELUG00000017643	srpra	94	67.367	ENSMEUG00000004956	SRPRA	100	66.935	Notamacropus_eugenii
ENSELUG00000017643	srpra	100	64.894	ENSOPRG00000013160	SRPRA	100	64.231	Ochotona_princeps
ENSELUG00000017643	srpra	100	68.278	ENSODEG00000004730	SRPRA	100	68.760	Octodon_degus
ENSELUG00000017643	srpra	100	84.332	ENSONIG00000005324	srpra	100	82.796	Oreochromis_niloticus
ENSELUG00000017643	srpra	100	69.466	ENSOCUG00000017057	SRPRA	100	68.654	Oryctolagus_cuniculus
ENSELUG00000017643	srpra	100	83.564	ENSORLG00000014676	srpra	91	96.190	Oryzias_latipes
ENSELUG00000017643	srpra	100	84.049	ENSORLG00020009240	srpra	100	83.742	Oryzias_latipes_hni
ENSELUG00000017643	srpra	100	82.975	ENSORLG00015015405	srpra	100	83.436	Oryzias_latipes_hsok
ENSELUG00000017643	srpra	100	83.436	ENSOMEG00000005872	srpra	100	83.129	Oryzias_melastigma
ENSELUG00000017643	srpra	100	68.627	ENSOGAG00000008926	SRPRA	100	68.845	Otolemur_garnettii
ENSELUG00000017643	srpra	100	65.805	ENSOARG00000012397	SRPRA	100	66.009	Ovis_aries
ENSELUG00000017643	srpra	100	68.389	ENSPPAG00000030813	SRPRA	100	68.702	Pan_paniscus
ENSELUG00000017643	srpra	100	69.512	ENSPPRG00000001542	SRPRA	100	68.750	Panthera_pardus
ENSELUG00000017643	srpra	100	69.360	ENSPTIG00000006989	SRPRA	100	68.437	Panthera_tigris_altaica
ENSELUG00000017643	srpra	100	68.389	ENSPTRG00000028360	SRPRA	100	68.702	Pan_troglodytes
ENSELUG00000017643	srpra	100	69.008	ENSPANG00000010858	SRPRA	100	68.855	Papio_anubis
ENSELUG00000017643	srpra	100	78.354	ENSPKIG00000016106	srpra	100	78.811	Paramormyrops_kingsleyae
ENSELUG00000017643	srpra	94	70.310	ENSPSIG00000012009	SRPRA	100	68.498	Pelodiscus_sinensis
ENSELUG00000017643	srpra	100	82.389	ENSPMGG00000001393	srpra	100	81.135	Periophthalmus_magnuspinnatus
ENSELUG00000017643	srpra	100	68.606	ENSPEMG00000018279	Srpr	100	68.606	Peromyscus_maniculatus_bairdii
ENSELUG00000017643	srpra	99	61.103	ENSPMAG00000009559	srpra	99	61.409	Petromyzon_marinus
ENSELUG00000017643	srpra	100	66.967	ENSPCIG00000010207	SRPRA	100	68.244	Phascolarctos_cinereus
ENSELUG00000017643	srpra	100	84.816	ENSPFOG00000003114	srpra	100	85.429	Poecilia_formosa
ENSELUG00000017643	srpra	100	84.509	ENSPLAG00000007323	srpra	100	85.123	Poecilia_latipinna
ENSELUG00000017643	srpra	100	84.816	ENSPMEG00000015658	srpra	100	85.429	Poecilia_mexicana
ENSELUG00000017643	srpra	100	83.896	ENSPREG00000004937	srpra	100	84.251	Poecilia_reticulata
ENSELUG00000017643	srpra	89	86.842	ENSPPYG00000004045	SRPRA	100	86.842	Pongo_abelii
ENSELUG00000017643	srpra	61	90.698	ENSPCAG00000003801	-	62	90.698	Procavia_capensis
ENSELUG00000017643	srpra	100	68.845	ENSPCOG00000025726	SRPRA	100	68.693	Propithecus_coquereli
ENSELUG00000017643	srpra	100	68.855	ENSPVAG00000000993	SRPRA	100	68.855	Pteropus_vampyrus
ENSELUG00000017643	srpra	100	84.793	ENSPNYG00000012371	srpra	100	83.257	Pundamilia_nyererei
ENSELUG00000017643	srpra	100	79.205	ENSPNAG00000013476	srpra	100	78.626	Pygocentrus_nattereri
ENSELUG00000017643	srpra	100	68.606	ENSRNOG00000010543	Srpra	100	68.606	Rattus_norvegicus
ENSELUG00000017643	srpra	100	68.855	ENSRBIG00000008702	SRPRA	100	68.855	Rhinopithecus_bieti
ENSELUG00000017643	srpra	100	68.855	ENSRROG00000029494	SRPRA	100	68.702	Rhinopithecus_roxellana
ENSELUG00000017643	srpra	53	40.220	YDR292C	-	52	42.249	Saccharomyces_cerevisiae
ENSELUG00000017643	srpra	100	68.702	ENSSBOG00000035892	SRPRA	100	68.550	Saimiri_boliviensis_boliviensis
ENSELUG00000017643	srpra	94	67.154	ENSSHAG00000009168	SRPRA	100	66.667	Sarcophilus_harrisii
ENSELUG00000017643	srpra	100	72.672	ENSSFOG00015008837	srpra	100	72.741	Scleropages_formosus
ENSELUG00000017643	srpra	100	74.426	ENSSMAG00000002783	srpra	100	73.435	Scophthalmus_maximus
ENSELUG00000017643	srpra	100	84.686	ENSSDUG00000013920	srpra	92	83.969	Seriola_dumerili
ENSELUG00000017643	srpra	100	84.533	ENSSLDG00000008601	srpra	93	83.817	Seriola_lalandi_dorsalis
ENSELUG00000017643	srpra	82	82.927	ENSSARG00000012434	SRPRA	86	82.927	Sorex_araneus
ENSELUG00000017643	srpra	100	67.933	ENSSPUG00000018221	SRPRA	100	67.073	Sphenodon_punctatus
ENSELUG00000017643	srpra	100	86.043	ENSSPAG00000005103	srpra	100	85.583	Stegastes_partitus
ENSELUG00000017643	srpra	100	69.466	ENSSSCG00000015227	SRPRA	100	69.313	Sus_scrofa
ENSELUG00000017643	srpra	94	69.268	ENSTGUG00000000815	SRPRA	100	67.974	Taeniopygia_guttata
ENSELUG00000017643	srpra	100	81.748	ENSTRUG00000006856	srpra	100	80.828	Takifugu_rubripes
ENSELUG00000017643	srpra	100	78.281	ENSTNIG00000010316	srpra	100	75.940	Tetraodon_nigroviridis
ENSELUG00000017643	srpra	100	69.044	ENSTTRG00000001558	SRPRA	100	68.589	Tursiops_truncatus
ENSELUG00000017643	srpra	100	69.196	ENSUAMG00000005510	SRPRA	100	69.008	Ursus_americanus
ENSELUG00000017643	srpra	96	63.537	ENSUMAG00000002269	SRPRA	100	63.380	Ursus_maritimus
ENSELUG00000017643	srpra	69	90.698	ENSVPAG00000001077	SRPRA	75	90.698	Vicugna_pacos
ENSELUG00000017643	srpra	100	68.997	ENSVVUG00000020094	SRPRA	100	68.845	Vulpes_vulpes
ENSELUG00000017643	srpra	100	62.935	ENSXETG00000003920	srpra	100	61.169	Xenopus_tropicalis
ENSELUG00000017643	srpra	84	95.238	ENSXCOG00000001286	srpra	97	95.238	Xiphophorus_couchianus
ENSELUG00000017643	srpra	100	84.639	ENSXMAG00000028401	srpra	100	84.686	Xiphophorus_maculatus