EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000017647 (Gene tree)
Gene ID: 105026260
Gene Symbol: fam172a
Alias: si:dkey-172f14.1|zgc:64188
Full Name: family with sequence similarity 172 member A
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 181744 bases
Position: chrLG13:31019178-31200921
Accession: 105026260
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000018069	Arb2	PF09757.9	1.3e-08	1	1
ENSELUP00000037882	Arb2	PF09757.9	1.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000027837	-	5348	-	ENSELUP00000018069	418 (aa)	-	UPI0005764559
ENSELUT00000027824	-	4765	XM_010897606	ENSELUP00000037882	418 (aa)	XP_010895908	UPI0005764559

Gene Model

Click here to download ENSELUG00000017647's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000017647's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000017647	fam172a	96	69.287	ENSG00000113391	FAM172A	99	68.901	Homo_sapiens
ENSELUG00000017647	fam172a	99	66.587	ENSAPLG00000004055	FAM172A	99	66.587	Anas_platyrhynchos
ENSELUG00000017647	fam172a	56	37.131	ENSAPLG00000011555	-	100	37.131	Anas_platyrhynchos
ENSELUG00000017647	fam172a	89	69.312	ENSACAG00000013305	FAM172A	98	69.312	Anolis_carolinensis
ENSELUG00000017647	fam172a	88	64.533	ENSANAG00000035869	FAM172A	93	64.171	Aotus_nancymaae
ENSELUG00000017647	fam172a	96	68.873	ENSBTAG00000050195	FAM172A	98	68.613	Bos_taurus
ENSELUG00000017647	fam172a	96	69.287	ENSCJAG00000010444	FAM172A	98	69.024	Callithrix_jacchus
ENSELUG00000017647	fam172a	84	71.508	ENSCAFG00000008064	FAM172A	97	71.191	Canis_familiaris
ENSELUG00000017647	fam172a	96	69.533	ENSCAFG00020006210	FAM172A	98	69.268	Canis_lupus_dingo
ENSELUG00000017647	fam172a	96	68.873	ENSCHIG00000008440	FAM172A	98	68.613	Capra_hircus
ENSELUG00000017647	fam172a	63	67.669	ENSTSYG00000006286	FAM172A	85	67.669	Carlito_syrichta
ENSELUG00000017647	fam172a	59	60.714	ENSCAPG00000014103	-	99	60.714	Cavia_aperea
ENSELUG00000017647	fam172a	96	69.287	ENSCCAG00000023116	FAM172A	99	68.901	Cebus_capucinus
ENSELUG00000017647	fam172a	88	68.548	ENSCLAG00000005472	FAM172A	96	68.548	Chinchilla_lanigera
ENSELUG00000017647	fam172a	87	40.751	ENSCPBG00000004402	-	97	40.751	Chrysemys_picta_bellii
ENSELUG00000017647	fam172a	64	67.407	ENSCANG00000040412	FAM172A	92	67.407	Colobus_angolensis_palliatus
ENSELUG00000017647	fam172a	96	69.042	ENSDNOG00000004689	FAM172A	98	68.780	Dasypus_novemcinctus
ENSELUG00000017647	fam172a	64	67.778	ENSDORG00000013558	Fam172a	88	67.778	Dipodomys_ordii
ENSELUG00000017647	fam172a	84	39.718	ENSEBUG00000016097	-	64	39.718	Eptatretus_burgeri
ENSELUG00000017647	fam172a	95	68.564	ENSECAG00000018274	FAM172A	96	70.278	Equus_caballus
ENSELUG00000017647	fam172a	80	66.568	ENSEEUG00000002887	FAM172A	98	58.495	Erinaceus_europaeus
ENSELUG00000017647	fam172a	96	69.533	ENSFCAG00000025443	FAM172A	98	69.268	Felis_catus
ENSELUG00000017647	fam172a	85	71.074	ENSFALG00000009072	FAM172A	97	71.074	Ficedula_albicollis
ENSELUG00000017647	fam172a	84	41.690	ENSFALG00000006501	-	99	41.690	Ficedula_albicollis
ENSELUG00000017647	fam172a	99	66.587	ENSGALG00000014661	FAM172A	99	66.587	Gallus_gallus
ENSELUG00000017647	fam172a	99	66.348	ENSGAGG00000003839	FAM172A	99	66.348	Gopherus_agassizii
ENSELUG00000017647	fam172a	84	42.297	ENSGAGG00000022828	-	94	42.297	Gopherus_agassizii
ENSELUG00000017647	fam172a	96	69.287	ENSGGOG00000010296	FAM172A	98	69.024	Gorilla_gorilla
ENSELUG00000017647	fam172a	95	68.317	ENSHGLG00000011178	FAM172A	99	79.747	Heterocephalus_glaber_female
ENSELUG00000017647	fam172a	84	70.588	ENSHGLG00100013340	FAM172A	100	79.747	Heterocephalus_glaber_male
ENSELUG00000017647	fam172a	96	68.796	ENSSTOG00000009918	FAM172A	98	68.537	Ictidomys_tridecemlineatus
ENSELUG00000017647	fam172a	84	47.578	ENSLACG00000001532	si:ch73-41e3.7	94	47.578	Latimeria_chalumnae
ENSELUG00000017647	fam172a	97	75.490	ENSLOCG00000001629	fam172a	98	75.245	Lepisosteus_oculatus
ENSELUG00000017647	fam172a	64	67.407	ENSMFAG00000001171	FAM172A	92	67.407	Macaca_fascicularis
ENSELUG00000017647	fam172a	91	69.792	ENSMNEG00000039938	FAM172A	92	67.407	Macaca_nemestrina
ENSELUG00000017647	fam172a	97	69.024	ENSMICG00000030403	FAM172A	98	69.024	Microcebus_murinus
ENSELUG00000017647	fam172a	88	68.097	ENSMOCG00000003613	Fam172a	99	68.097	Microtus_ochrogaster
ENSELUG00000017647	fam172a	96	67.971	ENSMODG00000020131	FAM172A	97	67.971	Monodelphis_domestica
ENSELUG00000017647	fam172a	73	78.481	MGP_PahariEiJ_G0015818	Fam172a	99	78.481	Mus_pahari
ENSELUG00000017647	fam172a	88	68.633	ENSNGAG00000019570	Fam172a	99	68.633	Nannospalax_galili
ENSELUG00000017647	fam172a	64	67.407	ENSNLEG00000013903	FAM172A	89	67.407	Nomascus_leucogenys
ENSELUG00000017647	fam172a	84	70.225	ENSOANG00000011068	FAM172A	95	70.225	Ornithorhynchus_anatinus
ENSELUG00000017647	fam172a	90	71.018	ENSOCUG00000007299	FAM172A	91	71.018	Oryctolagus_cuniculus
ENSELUG00000017647	fam172a	96	68.305	ENSOGAG00000015189	FAM172A	98	68.049	Otolemur_garnettii
ENSELUG00000017647	fam172a	87	69.189	ENSOARG00000016711	FAM172A	85	68.901	Ovis_aries
ENSELUG00000017647	fam172a	64	67.407	ENSPPAG00000030542	FAM172A	92	67.407	Pan_paniscus
ENSELUG00000017647	fam172a	96	69.533	ENSPPRG00000006653	FAM172A	98	69.268	Panthera_pardus
ENSELUG00000017647	fam172a	96	69.533	ENSPTIG00000012681	FAM172A	98	69.268	Panthera_tigris_altaica
ENSELUG00000017647	fam172a	64	67.407	ENSPTRG00000017074	FAM172A	92	67.407	Pan_troglodytes
ENSELUG00000017647	fam172a	64	67.407	ENSPANG00000011687	FAM172A	92	67.407	Papio_anubis
ENSELUG00000017647	fam172a	95	74.065	ENSPKIG00000012314	fam172a	98	81.915	Paramormyrops_kingsleyae
ENSELUG00000017647	fam172a	96	68.473	ENSPEMG00000009604	-	99	79.747	Peromyscus_maniculatus_bairdii
ENSELUG00000017647	fam172a	96	67.726	ENSPCIG00000028612	FAM172A	97	67.726	Phascolarctos_cinereus
ENSELUG00000017647	fam172a	54	62.771	ENSPCOG00000024072	FAM172A	92	62.771	Propithecus_coquereli
ENSELUG00000017647	fam172a	63	67.286	ENSRNOG00000013844	Fam172a	99	67.286	Rattus_norvegicus
ENSELUG00000017647	fam172a	64	67.407	ENSRROG00000023807	FAM172A	92	67.407	Rhinopithecus_roxellana
ENSELUG00000017647	fam172a	96	69.533	ENSSBOG00000019860	FAM172A	98	69.268	Saimiri_boliviensis_boliviensis
ENSELUG00000017647	fam172a	96	67.726	ENSSHAG00000013743	FAM172A	97	67.726	Sarcophilus_harrisii
ENSELUG00000017647	fam172a	97	68.293	ENSSPUG00000008161	FAM172A	98	68.293	Sphenodon_punctatus
ENSELUG00000017647	fam172a	98	68.750	ENSSSCG00000027608	FAM172A	99	69.169	Sus_scrofa
ENSELUG00000017647	fam172a	91	69.531	ENSTGUG00000000715	FAM172A	99	69.531	Taeniopygia_guttata
ENSELUG00000017647	fam172a	77	41.033	ENSTGUG00000013623	-	98	41.033	Taeniopygia_guttata
ENSELUG00000017647	fam172a	78	65.964	ENSTNIG00000009902	fam172a	100	67.169	Tetraodon_nigroviridis
ENSELUG00000017647	fam172a	96	67.971	ENSTTRG00000001521	FAM172A	97	67.971	Tursiops_truncatus
ENSELUG00000017647	fam172a	96	69.287	ENSUMAG00000005442	FAM172A	98	69.024	Ursus_maritimus
ENSELUG00000017647	fam172a	96	69.533	ENSVVUG00000022112	FAM172A	96	71.350	Vulpes_vulpes
ENSELUG00000017647	fam172a	90	40.633	ENSXETG00000033027	-	99	40.633	Xenopus_tropicalis
ENSELUG00000017647	fam172a	97	65.542	ENSXETG00000011592	fam172a	97	65.542	Xenopus_tropicalis