EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000017686 (Gene tree)
Gene ID: 105012327
Gene Symbol: trnau1apa
Alias: trnau1ap|zgc:110606
Full Name: tRNA selenocysteine 1 associated protein 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 4893 bases
Position: chrLG10:23639103-23643995
Accession: 105012327
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000037937	RRM_1	PF00076.22	2.7e-25	1	2
ENSELUP00000037937	RRM_1	PF00076.22	2.7e-25	2	2
ENSELUP00000018130	RRM_1	PF00076.22	8.2e-22	1	2
ENSELUP00000018130	RRM_1	PF00076.22	8.2e-22	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000027966	-	1670	XM_010873087	ENSELUP00000037937	305 (aa)	XP_010871389	UPI000577D004
ENSELUT00000027911	-	1846	-	ENSELUP00000018130	293 (aa)	-	-

Gene Model

Click here to download ENSELUG00000017686's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000017686's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000017686	trnau1apa	95	84.536	ENSELUG00000022790	-	96	84.536
ENSELUG00000017686	trnau1apa	94	44.785	ENSELUG00000016683	trnau1apb	95	46.129
ENSELUG00000017686	trnau1apa	57	30.726	ENSELUG00000005615	-	58	30.726
ENSELUG00000017686	trnau1apa	59	30.256	ENSELUG00000001811	pabpc1l	64	30.256

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000017686	trnau1apa	94	62.718	ENSG00000180098	TRNAU1AP	96	63.066	Homo_sapiens
ENSELUG00000017686	trnau1apa	100	75.399	ENSAPOG00000007148	TRNAU1AP	100	73.397	Acanthochromis_polyacanthus
ENSELUG00000017686	trnau1apa	94	62.718	ENSAMEG00000011367	TRNAU1AP	96	63.066	Ailuropoda_melanoleuca
ENSELUG00000017686	trnau1apa	90	87.640	ENSACIG00000004161	trnau1apa	93	87.640	Amphilophus_citrinellus
ENSELUG00000017686	trnau1apa	100	77.170	ENSAOCG00000008056	trnau1apa	100	74.839	Amphiprion_ocellaris
ENSELUG00000017686	trnau1apa	100	77.170	ENSAPEG00000008868	trnau1apa	100	74.839	Amphiprion_percula
ENSELUG00000017686	trnau1apa	100	74.843	ENSATEG00000012140	trnau1apa	100	73.101	Anabas_testudineus
ENSELUG00000017686	trnau1apa	93	62.271	ENSAPLG00000002606	TRNAU1AP	99	62.676	Anas_platyrhynchos
ENSELUG00000017686	trnau1apa	73	37.559	ENSACAG00000004205	-	84	36.522	Anolis_carolinensis
ENSELUG00000017686	trnau1apa	94	51.986	ENSACAG00000003995	-	95	51.379	Anolis_carolinensis
ENSELUG00000017686	trnau1apa	94	62.718	ENSANAG00000018976	TRNAU1AP	96	63.066	Aotus_nancymaae
ENSELUG00000017686	trnau1apa	100	75.728	ENSACLG00000018515	trnau1apa	100	73.701	Astatotilapia_calliptera
ENSELUG00000017686	trnau1apa	93	76.667	ENSAMXG00000029240	-	98	76.667	Astyanax_mexicanus
ENSELUG00000017686	trnau1apa	99	56.311	ENSAMXG00000013750	trnau1apa	97	54.341	Astyanax_mexicanus
ENSELUG00000017686	trnau1apa	94	62.369	ENSBTAG00000010393	TRNAU1AP	96	62.718	Bos_taurus
ENSELUG00000017686	trnau1apa	52	33.125	WBGene00011589	T07F10.3	53	30.542	Caenorhabditis_elegans
ENSELUG00000017686	trnau1apa	94	62.718	ENSCJAG00000009717	TRNAU1AP	96	63.066	Callithrix_jacchus
ENSELUG00000017686	trnau1apa	94	63.066	ENSCAFG00000011735	TRNAU1AP	96	63.415	Canis_familiaris
ENSELUG00000017686	trnau1apa	94	63.066	ENSCAFG00020023584	TRNAU1AP	96	63.415	Canis_lupus_dingo
ENSELUG00000017686	trnau1apa	94	62.369	ENSCHIG00000023215	TRNAU1AP	96	62.718	Capra_hircus
ENSELUG00000017686	trnau1apa	94	62.718	ENSTSYG00000003506	TRNAU1AP	96	63.066	Carlito_syrichta
ENSELUG00000017686	trnau1apa	94	63.066	ENSCPOG00000001925	TRNAU1AP	96	63.415	Cavia_porcellus
ENSELUG00000017686	trnau1apa	94	62.718	ENSCCAG00000037506	TRNAU1AP	96	63.066	Cebus_capucinus
ENSELUG00000017686	trnau1apa	94	62.369	ENSCATG00000044617	TRNAU1AP	96	62.718	Cercocebus_atys
ENSELUG00000017686	trnau1apa	94	63.066	ENSCLAG00000008223	TRNAU1AP	96	63.415	Chinchilla_lanigera
ENSELUG00000017686	trnau1apa	94	62.369	ENSCSAG00000001014	TRNAU1AP	96	62.718	Chlorocebus_sabaeus
ENSELUG00000017686	trnau1apa	94	61.232	ENSCPBG00000000121	TRNAU1AP	97	61.957	Chrysemys_picta_bellii
ENSELUG00000017686	trnau1apa	56	48.780	ENSCSAVG00000011781	-	86	48.780	Ciona_savignyi
ENSELUG00000017686	trnau1apa	94	54.007	ENSCANG00000041949	TRNAU1AP	95	57.303	Colobus_angolensis_palliatus
ENSELUG00000017686	trnau1apa	94	62.718	ENSCGRG00001004713	Trnau1ap	96	63.066	Cricetulus_griseus_chok1gshd
ENSELUG00000017686	trnau1apa	94	62.718	ENSCGRG00000014532	Trnau1ap	96	63.066	Cricetulus_griseus_crigri
ENSELUG00000017686	trnau1apa	100	68.471	ENSCSEG00000006663	trnau1apa	100	69.304	Cynoglossus_semilaevis
ENSELUG00000017686	trnau1apa	100	68.601	ENSCVAG00000018069	trnau1apa	99	67.314	Cyprinodon_variegatus
ENSELUG00000017686	trnau1apa	99	53.035	ENSDARG00000101323	trnau1apa	95	54.045	Danio_rerio
ENSELUG00000017686	trnau1apa	94	62.718	ENSDNOG00000033009	TRNAU1AP	96	63.066	Dasypus_novemcinctus
ENSELUG00000017686	trnau1apa	58	62.722	ENSDNOG00000047959	-	90	63.429	Dasypus_novemcinctus
ENSELUG00000017686	trnau1apa	94	59.783	ENSDORG00000006349	Trnau1ap	96	58.596	Dipodomys_ordii
ENSELUG00000017686	trnau1apa	94	34.347	FBgn0031607	CG15440	98	33.131	Drosophila_melanogaster
ENSELUG00000017686	trnau1apa	83	59.016	ENSETEG00000012594	TRNAU1AP	96	59.426	Echinops_telfairi
ENSELUG00000017686	trnau1apa	60	46.237	ENSEBUG00000006349	-	61	46.237	Eptatretus_burgeri
ENSELUG00000017686	trnau1apa	94	62.718	ENSEASG00005010062	TRNAU1AP	90	71.622	Equus_asinus_asinus
ENSELUG00000017686	trnau1apa	94	62.718	ENSECAG00000012980	TRNAU1AP	90	71.622	Equus_caballus
ENSELUG00000017686	trnau1apa	94	62.718	ENSFCAG00000013401	TRNAU1AP	96	63.066	Felis_catus
ENSELUG00000017686	trnau1apa	94	61.594	ENSFALG00000001371	TRNAU1AP	97	62.007	Ficedula_albicollis
ENSELUG00000017686	trnau1apa	94	63.066	ENSFDAG00000018599	TRNAU1AP	96	63.415	Fukomys_damarensis
ENSELUG00000017686	trnau1apa	78	74.797	ENSFHEG00000018232	trnau1apa	86	70.992	Fundulus_heteroclitus
ENSELUG00000017686	trnau1apa	100	64.610	ENSGMOG00000016508	trnau1apa	99	64.935	Gadus_morhua
ENSELUG00000017686	trnau1apa	94	61.324	ENSGALG00000001310	-	96	62.414	Gallus_gallus
ENSELUG00000017686	trnau1apa	78	38.956	ENSGALG00000012721	C2H6orf52	90	38.211	Gallus_gallus
ENSELUG00000017686	trnau1apa	80	72.289	ENSGAFG00000004928	trnau1apa	97	70.930	Gambusia_affinis
ENSELUG00000017686	trnau1apa	100	77.597	ENSGACG00000001443	trnau1apa	100	75.570	Gasterosteus_aculeatus
ENSELUG00000017686	trnau1apa	94	60.870	ENSGAGG00000004940	TRNAU1AP	97	61.649	Gopherus_agassizii
ENSELUG00000017686	trnau1apa	94	62.718	ENSGGOG00000003511	TRNAU1AP	96	63.066	Gorilla_gorilla
ENSELUG00000017686	trnau1apa	100	74.760	ENSHBUG00000002510	trnau1apa	100	72.756	Haplochromis_burtoni
ENSELUG00000017686	trnau1apa	94	63.066	ENSHGLG00000010380	TRNAU1AP	96	63.415	Heterocephalus_glaber_female
ENSELUG00000017686	trnau1apa	93	62.500	ENSHGLG00100012699	TRNAU1AP	96	60.976	Heterocephalus_glaber_male
ENSELUG00000017686	trnau1apa	99	65.484	ENSHCOG00000014770	trnau1apa	99	63.871	Hippocampus_comes
ENSELUG00000017686	trnau1apa	94	62.718	ENSSTOG00000000079	TRNAU1AP	96	63.066	Ictidomys_tridecemlineatus
ENSELUG00000017686	trnau1apa	94	62.718	ENSJJAG00000010128	Trnau1ap	96	63.066	Jaculus_jaculus
ENSELUG00000017686	trnau1apa	100	72.669	ENSKMAG00000001230	trnau1apa	100	70.645	Kryptolebias_marmoratus
ENSELUG00000017686	trnau1apa	100	75.394	ENSLBEG00000011683	trnau1apa	100	72.393	Labrus_bergylta
ENSELUG00000017686	trnau1apa	99	52.145	ENSLACG00000005541	TRNAU1AP	99	52.805	Latimeria_chalumnae
ENSELUG00000017686	trnau1apa	98	63.123	ENSLOCG00000004041	trnau1apa	99	62.458	Lepisosteus_oculatus
ENSELUG00000017686	trnau1apa	94	63.066	ENSLAFG00000007628	TRNAU1AP	96	63.415	Loxodonta_africana
ENSELUG00000017686	trnau1apa	94	62.369	ENSMFAG00000043751	TRNAU1AP	96	62.718	Macaca_fascicularis
ENSELUG00000017686	trnau1apa	94	62.369	ENSMMUG00000006561	TRNAU1AP	96	62.718	Macaca_mulatta
ENSELUG00000017686	trnau1apa	94	62.369	ENSMNEG00000044201	TRNAU1AP	96	62.718	Macaca_nemestrina
ENSELUG00000017686	trnau1apa	94	62.369	ENSMLEG00000015649	TRNAU1AP	96	62.718	Mandrillus_leucophaeus
ENSELUG00000017686	trnau1apa	99	75.159	ENSMAMG00000001247	trnau1apa	100	74.522	Mastacembelus_armatus
ENSELUG00000017686	trnau1apa	100	75.728	ENSMZEG00005017722	trnau1apa	100	73.701	Maylandia_zebra
ENSELUG00000017686	trnau1apa	94	61.594	ENSMGAG00000002105	TRNAU1AP	97	62.500	Meleagris_gallopavo
ENSELUG00000017686	trnau1apa	94	62.718	ENSMICG00000008386	TRNAU1AP	96	63.066	Microcebus_murinus
ENSELUG00000017686	trnau1apa	94	62.718	ENSMOCG00000011189	Trnau1ap	96	63.066	Microtus_ochrogaster
ENSELUG00000017686	trnau1apa	100	63.961	ENSMMOG00000012107	trnau1apa	99	64.401	Mola_mola
ENSELUG00000017686	trnau1apa	94	62.500	ENSMODG00000010927	TRNAU1AP	96	61.111	Monodelphis_domestica
ENSELUG00000017686	trnau1apa	100	74.522	ENSMALG00000016778	trnau1apa	100	74.121	Monopterus_albus
ENSELUG00000017686	trnau1apa	94	62.369	MGP_CAROLIEiJ_G0026563	Trnau1ap	96	62.718	Mus_caroli
ENSELUG00000017686	trnau1apa	94	62.369	ENSMUSG00000028898	Trnau1ap	96	62.718	Mus_musculus
ENSELUG00000017686	trnau1apa	94	62.369	MGP_PahariEiJ_G0028896	Trnau1ap	86	76.667	Mus_pahari
ENSELUG00000017686	trnau1apa	94	62.369	MGP_SPRETEiJ_G0027544	Trnau1ap	96	62.718	Mus_spretus
ENSELUG00000017686	trnau1apa	94	62.718	ENSMPUG00000015511	TRNAU1AP	96	63.066	Mustela_putorius_furo
ENSELUG00000017686	trnau1apa	94	62.718	ENSMLUG00000012586	TRNAU1AP	96	63.066	Myotis_lucifugus
ENSELUG00000017686	trnau1apa	94	62.369	ENSNGAG00000015881	Trnau1ap	96	62.718	Nannospalax_galili
ENSELUG00000017686	trnau1apa	100	66.221	ENSNBRG00000001758	trnau1apa	99	61.755	Neolamprologus_brichardi
ENSELUG00000017686	trnau1apa	94	62.718	ENSNLEG00000009822	TRNAU1AP	96	63.066	Nomascus_leucogenys
ENSELUG00000017686	trnau1apa	94	61.372	ENSMEUG00000006117	TRNAU1AP	97	60.498	Notamacropus_eugenii
ENSELUG00000017686	trnau1apa	53	65.909	ENSOPRG00000007084	-	60	65.909	Ochotona_princeps
ENSELUG00000017686	trnau1apa	94	63.066	ENSODEG00000002970	TRNAU1AP	96	63.415	Octodon_degus
ENSELUG00000017686	trnau1apa	82	75.918	ENSONIG00000004715	trnau1apa	97	73.387	Oreochromis_niloticus
ENSELUG00000017686	trnau1apa	94	49.653	ENSOANG00000005325	-	96	49.301	Ornithorhynchus_anatinus
ENSELUG00000017686	trnau1apa	94	61.324	ENSOCUG00000011704	-	96	61.672	Oryctolagus_cuniculus
ENSELUG00000017686	trnau1apa	94	53.633	ENSOCUG00000002353	-	96	54.167	Oryctolagus_cuniculus
ENSELUG00000017686	trnau1apa	85	50.193	ENSOCUG00000006834	-	97	47.510	Oryctolagus_cuniculus
ENSELUG00000017686	trnau1apa	100	68.489	ENSORLG00000010428	trnau1apa	100	68.710	Oryzias_latipes
ENSELUG00000017686	trnau1apa	100	68.489	ENSORLG00020000926	trnau1ap	100	68.710	Oryzias_latipes_hni
ENSELUG00000017686	trnau1apa	100	68.489	ENSORLG00015009858	trnau1ap	100	68.710	Oryzias_latipes_hsok
ENSELUG00000017686	trnau1apa	100	66.881	ENSOMEG00000007873	trnau1apa	100	67.097	Oryzias_melastigma
ENSELUG00000017686	trnau1apa	94	62.718	ENSOGAG00000002274	TRNAU1AP	96	63.066	Otolemur_garnettii
ENSELUG00000017686	trnau1apa	94	62.369	ENSOARG00000002843	TRNAU1AP	96	62.718	Ovis_aries
ENSELUG00000017686	trnau1apa	94	62.718	ENSPPAG00000033927	TRNAU1AP	96	63.066	Pan_paniscus
ENSELUG00000017686	trnau1apa	94	62.718	ENSPPRG00000004416	TRNAU1AP	96	63.066	Panthera_pardus
ENSELUG00000017686	trnau1apa	94	62.718	ENSPTIG00000016677	TRNAU1AP	96	63.066	Panthera_tigris_altaica
ENSELUG00000017686	trnau1apa	90	53.788	ENSPTRG00000000434	-	92	53.788	Pan_troglodytes
ENSELUG00000017686	trnau1apa	94	62.369	ENSPANG00000016019	TRNAU1AP	96	62.718	Papio_anubis
ENSELUG00000017686	trnau1apa	95	83.696	ENSPKIG00000022205	-	98	83.696	Paramormyrops_kingsleyae
ENSELUG00000017686	trnau1apa	93	61.324	ENSPKIG00000015511	trnau1apa	93	60.976	Paramormyrops_kingsleyae
ENSELUG00000017686	trnau1apa	94	61.232	ENSPSIG00000006864	TRNAU1AP	97	61.649	Pelodiscus_sinensis
ENSELUG00000017686	trnau1apa	99	62.799	ENSPMGG00000023893	trnau1apa	96	60.201	Periophthalmus_magnuspinnatus
ENSELUG00000017686	trnau1apa	94	62.369	ENSPEMG00000007877	Trnau1ap	96	62.718	Peromyscus_maniculatus_bairdii
ENSELUG00000017686	trnau1apa	76	51.570	ENSPMAG00000005934	trnau1apa	86	54.000	Petromyzon_marinus
ENSELUG00000017686	trnau1apa	57	53.371	ENSPMAG00000000592	trnau1apa	97	53.371	Petromyzon_marinus
ENSELUG00000017686	trnau1apa	99	68.285	ENSPFOG00000008100	trnau1apa	99	67.638	Poecilia_formosa
ENSELUG00000017686	trnau1apa	99	67.340	ENSPLAG00000010236	trnau1apa	99	66.667	Poecilia_latipinna
ENSELUG00000017686	trnau1apa	99	67.340	ENSPMEG00000016387	trnau1apa	97	65.584	Poecilia_mexicana
ENSELUG00000017686	trnau1apa	91	85.714	ENSPREG00000019821	trnau1apa	91	85.714	Poecilia_reticulata
ENSELUG00000017686	trnau1apa	88	53.462	ENSPPYG00000001639	-	96	53.846	Pongo_abelii
ENSELUG00000017686	trnau1apa	94	62.718	ENSPCOG00000027712	-	96	63.066	Propithecus_coquereli
ENSELUG00000017686	trnau1apa	94	49.091	ENSPCOG00000023470	-	96	47.917	Propithecus_coquereli
ENSELUG00000017686	trnau1apa	94	62.718	ENSPVAG00000017214	TRNAU1AP	96	63.066	Pteropus_vampyrus
ENSELUG00000017686	trnau1apa	100	75.080	ENSPNYG00000010130	trnau1apa	100	73.077	Pundamilia_nyererei
ENSELUG00000017686	trnau1apa	99	56.026	ENSPNAG00000024905	trnau1apa	97	55.484	Pygocentrus_nattereri
ENSELUG00000017686	trnau1apa	85	59.459	ENSRNOG00000055344	Trnau1ap	85	60.385	Rattus_norvegicus
ENSELUG00000017686	trnau1apa	94	62.718	ENSRBIG00000029083	TRNAU1AP	96	63.066	Rhinopithecus_bieti
ENSELUG00000017686	trnau1apa	94	62.718	ENSRROG00000029128	TRNAU1AP	96	63.066	Rhinopithecus_roxellana
ENSELUG00000017686	trnau1apa	94	62.718	ENSSBOG00000021299	TRNAU1AP	96	63.066	Saimiri_boliviensis_boliviensis
ENSELUG00000017686	trnau1apa	94	62.500	ENSSHAG00000008108	TRNAU1AP	96	61.111	Sarcophilus_harrisii
ENSELUG00000017686	trnau1apa	100	73.397	ENSSMAG00000020851	trnau1apa	100	74.121	Scophthalmus_maximus
ENSELUG00000017686	trnau1apa	100	76.266	ENSSDUG00000011734	trnau1apa	100	74.286	Seriola_dumerili
ENSELUG00000017686	trnau1apa	100	62.623	ENSSLDG00000012101	trnau1apa	99	60.656	Seriola_lalandi_dorsalis
ENSELUG00000017686	trnau1apa	94	62.319	ENSSARG00000007536	TRNAU1AP	97	63.214	Sorex_araneus
ENSELUG00000017686	trnau1apa	65	51.813	ENSSPUG00000010415	-	95	52.486	Sphenodon_punctatus
ENSELUG00000017686	trnau1apa	94	58.537	ENSSPUG00000010400	-	97	58.966	Sphenodon_punctatus
ENSELUG00000017686	trnau1apa	100	75.641	ENSSPAG00000005029	trnau1apa	100	73.633	Stegastes_partitus
ENSELUG00000017686	trnau1apa	94	62.718	ENSSSCG00000030284	TRNAU1AP	96	63.066	Sus_scrofa
ENSELUG00000017686	trnau1apa	94	61.957	ENSTGUG00000000735	-	97	62.857	Taeniopygia_guttata
ENSELUG00000017686	trnau1apa	72	42.654	ENSTGUG00000005908	-	100	41.429	Taeniopygia_guttata
ENSELUG00000017686	trnau1apa	100	72.524	ENSTRUG00000003352	trnau1apa	100	71.383	Takifugu_rubripes
ENSELUG00000017686	trnau1apa	100	68.571	ENSTNIG00000006129	trnau1apa	100	68.051	Tetraodon_nigroviridis
ENSELUG00000017686	trnau1apa	83	56.275	ENSTBEG00000008049	-	95	54.508	Tupaia_belangeri
ENSELUG00000017686	trnau1apa	94	62.718	ENSTTRG00000001854	TRNAU1AP	96	63.066	Tursiops_truncatus
ENSELUG00000017686	trnau1apa	94	62.319	ENSUAMG00000008789	TRNAU1AP	97	62.681	Ursus_americanus
ENSELUG00000017686	trnau1apa	94	62.718	ENSUMAG00000011068	TRNAU1AP	96	63.542	Ursus_maritimus
ENSELUG00000017686	trnau1apa	94	54.698	ENSVPAG00000006778	TRNAU1AP	97	55.034	Vicugna_pacos
ENSELUG00000017686	trnau1apa	94	62.681	ENSVVUG00000012518	TRNAU1AP	89	62.807	Vulpes_vulpes
ENSELUG00000017686	trnau1apa	99	67.419	ENSXMAG00000017361	trnau1apa	99	67.961	Xiphophorus_maculatus