EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000017703 (Gene tree)
Gene ID: 105012921
Gene Symbol: tsen54
Alias: zgc:109927
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 7143 bases
Position: chrLG11:28875504-28882646
Accession: 105012921
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000037945	tRNA_int_end_N2	PF12928.7	1.3e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000028121	-	1807	XM_010874078	ENSELUP00000037945	577 (aa)	XP_010872380	-

Gene Model

Click here to download ENSELUG00000017703's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000017703's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000017703	tsen54	90	42.831	ENSG00000182173	TSEN54	100	62.500	Homo_sapiens
ENSELUG00000017703	tsen54	93	61.183	ENSAPOG00000009659	tsen54	99	60.628	Acanthochromis_polyacanthus
ENSELUG00000017703	tsen54	91	43.934	ENSAMEG00000009414	TSEN54	98	44.301	Ailuropoda_melanoleuca
ENSELUG00000017703	tsen54	92	62.454	ENSAOCG00000000152	tsen54	98	61.738	Amphiprion_ocellaris
ENSELUG00000017703	tsen54	92	62.082	ENSAPEG00000018931	tsen54	98	61.368	Amphiprion_percula
ENSELUG00000017703	tsen54	92	60.474	ENSATEG00000019860	tsen54	99	60.656	Anabas_testudineus
ENSELUG00000017703	tsen54	80	45.532	ENSAPLG00000009419	TSEN54	99	45.532	Anas_platyrhynchos
ENSELUG00000017703	tsen54	90	45.507	ENSACAG00000006714	TSEN54	97	45.640	Anolis_carolinensis
ENSELUG00000017703	tsen54	90	43.071	ENSANAG00000024061	TSEN54	96	45.143	Aotus_nancymaae
ENSELUG00000017703	tsen54	92	58.748	ENSACLG00000019800	tsen54	99	59.480	Astatotilapia_calliptera
ENSELUG00000017703	tsen54	90	58.476	ENSAMXG00000006546	tsen54	98	57.895	Astyanax_mexicanus
ENSELUG00000017703	tsen54	90	43.364	ENSBTAG00000000824	TSEN54	97	45.265	Bos_taurus
ENSELUG00000017703	tsen54	90	42.883	ENSCJAG00000014278	TSEN54	96	44.571	Callithrix_jacchus
ENSELUG00000017703	tsen54	90	44.444	ENSCAFG00000004798	TSEN54	97	45.185	Canis_familiaris
ENSELUG00000017703	tsen54	90	44.444	ENSCAFG00020000312	TSEN54	97	45.185	Canis_lupus_dingo
ENSELUG00000017703	tsen54	90	43.691	ENSCHIG00000019908	TSEN54	97	44.821	Capra_hircus
ENSELUG00000017703	tsen54	80	40.586	ENSTSYG00000037439	TSEN54	99	42.283	Carlito_syrichta
ENSELUG00000017703	tsen54	90	44.571	ENSCCAG00000036624	TSEN54	96	44.952	Cebus_capucinus
ENSELUG00000017703	tsen54	90	42.987	ENSCATG00000042877	TSEN54	96	42.754	Cercocebus_atys
ENSELUG00000017703	tsen54	90	45.455	ENSCLAG00000002924	TSEN54	96	45.455	Chinchilla_lanigera
ENSELUG00000017703	tsen54	90	42.831	ENSCSAG00000004809	TSEN54	97	44.259	Chlorocebus_sabaeus
ENSELUG00000017703	tsen54	90	45.009	ENSCPBG00000028071	TSEN54	98	45.009	Chrysemys_picta_bellii
ENSELUG00000017703	tsen54	90	42.518	ENSCANG00000028053	TSEN54	97	42.518	Colobus_angolensis_palliatus
ENSELUG00000017703	tsen54	90	44.424	ENSCGRG00001020029	Tsen54	97	43.253	Cricetulus_griseus_chok1gshd
ENSELUG00000017703	tsen54	79	42.521	ENSCGRG00000016289	Tsen54	99	42.521	Cricetulus_griseus_crigri
ENSELUG00000017703	tsen54	75	49.663	ENSCSEG00000020586	tsen54	99	49.663	Cynoglossus_semilaevis
ENSELUG00000017703	tsen54	75	54.670	ENSDARG00000036844	tsen54	99	54.670	Danio_rerio
ENSELUG00000017703	tsen54	90	44.381	ENSDNOG00000018452	TSEN54	97	45.627	Dasypus_novemcinctus
ENSELUG00000017703	tsen54	90	44.886	ENSDORG00000004073	Tsen54	97	44.340	Dipodomys_ordii
ENSELUG00000017703	tsen54	90	30.796	ENSEBUG00000005203	TSEN54	95	30.071	Eptatretus_burgeri
ENSELUG00000017703	tsen54	90	44.528	ENSEASG00005000579	TSEN54	97	44.528	Equus_asinus_asinus
ENSELUG00000017703	tsen54	90	44.717	ENSECAG00000004924	TSEN54	97	44.717	Equus_caballus
ENSELUG00000017703	tsen54	80	41.810	ENSEEUG00000008467	TSEN54	99	42.398	Erinaceus_europaeus
ENSELUG00000017703	tsen54	91	44.627	ENSFCAG00000023712	TSEN54	98	44.828	Felis_catus
ENSELUG00000017703	tsen54	86	44.711	ENSFALG00000001119	TSEN54	92	45.110	Ficedula_albicollis
ENSELUG00000017703	tsen54	80	43.789	ENSFDAG00000019090	TSEN54	99	43.789	Fukomys_damarensis
ENSELUG00000017703	tsen54	92	59.594	ENSFHEG00000005470	tsen54	99	59.041	Fundulus_heteroclitus
ENSELUG00000017703	tsen54	73	58.242	ENSGMOG00000013146	tsen54	99	58.242	Gadus_morhua
ENSELUG00000017703	tsen54	87	43.615	ENSGALG00000047163	TSEN54	96	43.615	Gallus_gallus
ENSELUG00000017703	tsen54	92	58.550	ENSGAFG00000005111	tsen54	99	57.807	Gambusia_affinis
ENSELUG00000017703	tsen54	89	55.598	ENSGACG00000014987	tsen54	99	55.133	Gasterosteus_aculeatus
ENSELUG00000017703	tsen54	91	45.607	ENSGAGG00000006825	TSEN54	97	45.607	Gopherus_agassizii
ENSELUG00000017703	tsen54	89	43.233	ENSGGOG00000009417	TSEN54	99	45.106	Gorilla_gorilla
ENSELUG00000017703	tsen54	84	57.863	ENSHBUG00000018296	tsen54	92	58.656	Haplochromis_burtoni
ENSELUG00000017703	tsen54	90	44.693	ENSHGLG00000007979	TSEN54	96	44.693	Heterocephalus_glaber_female
ENSELUG00000017703	tsen54	90	43.762	ENSHGLG00100005497	TSEN54	96	43.762	Heterocephalus_glaber_male
ENSELUG00000017703	tsen54	75	53.515	ENSHCOG00000007481	tsen54	99	53.288	Hippocampus_comes
ENSELUG00000017703	tsen54	92	49.156	ENSIPUG00000000590	tsen54	98	48.333	Ictalurus_punctatus
ENSELUG00000017703	tsen54	90	43.715	ENSSTOG00000012883	TSEN54	97	43.715	Ictidomys_tridecemlineatus
ENSELUG00000017703	tsen54	91	44.727	ENSJJAG00000007365	Tsen54	98	44.727	Jaculus_jaculus
ENSELUG00000017703	tsen54	92	58.473	ENSKMAG00000006944	tsen54	99	57.728	Kryptolebias_marmoratus
ENSELUG00000017703	tsen54	92	57.856	ENSLBEG00000004199	tsen54	99	57.196	Labrus_bergylta
ENSELUG00000017703	tsen54	90	38.208	ENSLACG00000009497	TSEN54	99	38.208	Latimeria_chalumnae
ENSELUG00000017703	tsen54	92	53.818	ENSLOCG00000011191	tsen54	99	53.188	Lepisosteus_oculatus
ENSELUG00000017703	tsen54	86	43.164	ENSLAFG00000011655	TSEN54	92	44.400	Loxodonta_africana
ENSELUG00000017703	tsen54	90	43.017	ENSMFAG00000000712	TSEN54	97	44.444	Macaca_fascicularis
ENSELUG00000017703	tsen54	90	43.017	ENSMNEG00000029199	TSEN54	97	44.444	Macaca_nemestrina
ENSELUG00000017703	tsen54	80	41.387	ENSMLEG00000044168	TSEN54	87	43.006	Mandrillus_leucophaeus
ENSELUG00000017703	tsen54	92	59.740	ENSMAMG00000019773	tsen54	99	60.708	Mastacembelus_armatus
ENSELUG00000017703	tsen54	92	58.564	ENSMZEG00005000884	tsen54	99	59.294	Maylandia_zebra
ENSELUG00000017703	tsen54	90	43.233	ENSMGAG00000009556	TSEN54	97	43.985	Meleagris_gallopavo
ENSELUG00000017703	tsen54	90	44.424	ENSMAUG00000016838	Tsen54	97	44.424	Mesocricetus_auratus
ENSELUG00000017703	tsen54	90	43.478	ENSMICG00000044012	TSEN54	97	44.045	Microcebus_murinus
ENSELUG00000017703	tsen54	91	42.963	ENSMOCG00000021585	Tsen54	98	42.963	Microtus_ochrogaster
ENSELUG00000017703	tsen54	89	55.106	ENSMMOG00000020189	tsen54	99	56.154	Mola_mola
ENSELUG00000017703	tsen54	90	45.113	ENSMODG00000007438	TSEN54	95	45.113	Monodelphis_domestica
ENSELUG00000017703	tsen54	92	61.993	ENSMALG00000020573	tsen54	99	61.993	Monopterus_albus
ENSELUG00000017703	tsen54	90	44.023	MGP_CAROLIEiJ_G0017417	Tsen54	97	44.023	Mus_caroli
ENSELUG00000017703	tsen54	90	43.152	ENSMUSG00000020781	Tsen54	97	43.152	Mus_musculus
ENSELUG00000017703	tsen54	90	43.358	MGP_PahariEiJ_G0018547	Tsen54	97	43.358	Mus_pahari
ENSELUG00000017703	tsen54	90	43.199	MGP_SPRETEiJ_G0018262	Tsen54	97	43.199	Mus_spretus
ENSELUG00000017703	tsen54	90	42.357	ENSMPUG00000013870	TSEN54	97	43.228	Mustela_putorius_furo
ENSELUG00000017703	tsen54	90	42.197	ENSMLUG00000015298	TSEN54	96	43.846	Myotis_lucifugus
ENSELUG00000017703	tsen54	91	44.590	ENSNGAG00000015673	Tsen54	98	44.590	Nannospalax_galili
ENSELUG00000017703	tsen54	82	38.144	ENSMEUG00000011908	TSEN54	99	39.337	Notamacropus_eugenii
ENSELUG00000017703	tsen54	90	41.288	ENSOPRG00000012513	TSEN54	97	41.288	Ochotona_princeps
ENSELUG00000017703	tsen54	92	60.297	ENSONIG00000009543	tsen54	99	59.926	Oreochromis_niloticus
ENSELUG00000017703	tsen54	91	40.619	ENSOCUG00000009875	TSEN54	98	40.255	Oryctolagus_cuniculus
ENSELUG00000017703	tsen54	92	54.206	ENSORLG00000000852	tsen54	99	53.458	Oryzias_latipes
ENSELUG00000017703	tsen54	92	54.360	ENSORLG00020018221	tsen54	99	54.190	Oryzias_latipes_hni
ENSELUG00000017703	tsen54	90	55.028	ENSORLG00015009413	tsen54	98	54.685	Oryzias_latipes_hsok
ENSELUG00000017703	tsen54	93	57.196	ENSOMEG00000014402	tsen54	97	56.075	Oryzias_melastigma
ENSELUG00000017703	tsen54	90	42.373	ENSOGAG00000001442	TSEN54	97	42.373	Otolemur_garnettii
ENSELUG00000017703	tsen54	80	41.632	ENSOARG00000010361	TSEN54	99	43.404	Ovis_aries
ENSELUG00000017703	tsen54	88	43.137	ENSPPAG00000043519	TSEN54	99	44.314	Pan_paniscus
ENSELUG00000017703	tsen54	91	44.809	ENSPPRG00000009162	TSEN54	98	45.009	Panthera_pardus
ENSELUG00000017703	tsen54	80	43.041	ENSPTIG00000019312	TSEN54	96	45.223	Panthera_tigris_altaica
ENSELUG00000017703	tsen54	90	43.017	ENSPTRG00000009646	TSEN54	97	44.867	Pan_troglodytes
ENSELUG00000017703	tsen54	90	42.754	ENSPANG00000020133	TSEN54	97	44.444	Papio_anubis
ENSELUG00000017703	tsen54	93	55.282	ENSPKIG00000023018	tsen54	99	55.251	Paramormyrops_kingsleyae
ENSELUG00000017703	tsen54	75	42.045	ENSPSIG00000012807	TSEN54	99	42.045	Pelodiscus_sinensis
ENSELUG00000017703	tsen54	87	43.056	ENSPMGG00000019578	tsen54	99	42.857	Periophthalmus_magnuspinnatus
ENSELUG00000017703	tsen54	90	44.444	ENSPEMG00000014857	Tsen54	97	44.444	Peromyscus_maniculatus_bairdii
ENSELUG00000017703	tsen54	92	57.482	ENSPFOG00000022740	tsen54	99	57.299	Poecilia_formosa
ENSELUG00000017703	tsen54	92	58.088	ENSPLAG00000014847	tsen54	99	57.904	Poecilia_latipinna
ENSELUG00000017703	tsen54	92	57.904	ENSPMEG00000022876	tsen54	99	57.721	Poecilia_mexicana
ENSELUG00000017703	tsen54	92	57.537	ENSPREG00000013090	tsen54	99	57.353	Poecilia_reticulata
ENSELUG00000017703	tsen54	85	42.857	ENSPPYG00000008629	TSEN54	99	43.469	Pongo_abelii
ENSELUG00000017703	tsen54	65	59.375	ENSPCAG00000002093	TSEN54	74	59.375	Procavia_capensis
ENSELUG00000017703	tsen54	90	43.646	ENSPCOG00000027880	TSEN54	97	44.383	Propithecus_coquereli
ENSELUG00000017703	tsen54	90	43.511	ENSPVAG00000008446	TSEN54	97	44.275	Pteropus_vampyrus
ENSELUG00000017703	tsen54	87	58.039	ENSPNYG00000010217	tsen54	99	58.614	Pundamilia_nyererei
ENSELUG00000017703	tsen54	92	56.792	ENSPNAG00000003770	tsen54	98	56.792	Pygocentrus_nattereri
ENSELUG00000017703	tsen54	90	45.167	ENSRNOG00000004598	Tsen54	97	45.167	Rattus_norvegicus
ENSELUG00000017703	tsen54	90	42.754	ENSRBIG00000043040	TSEN54	97	42.754	Rhinopithecus_bieti
ENSELUG00000017703	tsen54	90	42.754	ENSRROG00000030797	TSEN54	97	42.754	Rhinopithecus_roxellana
ENSELUG00000017703	tsen54	90	40.684	ENSSBOG00000013543	TSEN54	96	41.477	Saimiri_boliviensis_boliviensis
ENSELUG00000017703	tsen54	91	44.403	ENSSHAG00000018127	TSEN54	96	44.633	Sarcophilus_harrisii
ENSELUG00000017703	tsen54	76	54.318	ENSSFOG00015004093	tsen54	99	55.000	Scleropages_formosus
ENSELUG00000017703	tsen54	90	60.152	ENSSMAG00000012449	tsen54	98	60.491	Scophthalmus_maximus
ENSELUG00000017703	tsen54	92	63.720	ENSSDUG00000021506	tsen54	99	63.168	Seriola_dumerili
ENSELUG00000017703	tsen54	92	64.088	ENSSLDG00000016303	tsen54	99	63.536	Seriola_lalandi_dorsalis
ENSELUG00000017703	tsen54	75	42.955	ENSSPUG00000008988	TSEN54	96	42.727	Sphenodon_punctatus
ENSELUG00000017703	tsen54	87	60.359	ENSSPAG00000008098	-	99	59.960	Stegastes_partitus
ENSELUG00000017703	tsen54	75	54.233	ENSSPAG00000008047	tsen54	99	54.005	Stegastes_partitus
ENSELUG00000017703	tsen54	92	43.993	ENSSSCG00000036852	TSEN54	99	45.370	Sus_scrofa
ENSELUG00000017703	tsen54	80	44.586	ENSTGUG00000008548	TSEN54	99	44.586	Taeniopygia_guttata
ENSELUG00000017703	tsen54	92	56.929	ENSTRUG00000004230	tsen54	95	66.071	Takifugu_rubripes
ENSELUG00000017703	tsen54	80	41.935	ENSTTRG00000015828	TSEN54	99	43.348	Tursiops_truncatus
ENSELUG00000017703	tsen54	75	41.020	ENSUAMG00000010045	TSEN54	99	41.463	Ursus_americanus
ENSELUG00000017703	tsen54	78	42.241	ENSUMAG00000008979	TSEN54	99	43.142	Ursus_maritimus
ENSELUG00000017703	tsen54	92	44.022	ENSVVUG00000011411	TSEN54	99	44.928	Vulpes_vulpes
ENSELUG00000017703	tsen54	90	44.234	ENSXETG00000012532	tsen54	99	61.667	Xenopus_tropicalis
ENSELUG00000017703	tsen54	76	72.500	ENSXCOG00000018245	tsen54	97	72.500	Xiphophorus_couchianus
ENSELUG00000017703	tsen54	92	58.824	ENSXMAG00000018818	tsen54	99	58.640	Xiphophorus_maculatus