EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000017824 (Gene tree)
Gene ID: 105012333
Gene Symbol: vars2
Alias: si:ch211-152p11.2
Full Name: valyl-tRNA synthetase 2%2C mitochondrial
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 18522 bases
Position: chrLG10:23587108-23605629
Accession: 105012333
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000038046	tRNA-synt_1g	PF09334.11	2e-14	1	1
ENSELUP00000038046	Anticodon_1	PF08264.13	4.4e-32	1	1
ENSELUP00000038046	tRNA-synt_1	PF00133.22	2.6e-195	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000028144	-	3282	XM_010873090	ENSELUP00000038046	1092 (aa)	XP_010871392	UPI000576EFFF

Gene Model

Click here to download ENSELUG00000017824's gene model file

Pathways

Pathway ID	Pathway Name	Source
els00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000017824's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000017824	vars2	92	50.639	ENSELUG00000006550	vars	76	50.291

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000017824	vars2	96	71.429	ENSAPOG00000007396	vars2	99	69.633	Acanthochromis_polyacanthus
ENSELUG00000017824	vars2	97	51.270	ENSAMEG00000012997	VARS2	91	51.744	Ailuropoda_melanoleuca
ENSELUG00000017824	vars2	97	71.132	ENSACIG00000004344	vars2	98	71.132	Amphilophus_citrinellus
ENSELUG00000017824	vars2	96	71.524	ENSAOCG00000000476	vars2	99	69.633	Amphiprion_ocellaris
ENSELUG00000017824	vars2	96	71.045	ENSAPEG00000008646	vars2	97	69.174	Amphiprion_percula
ENSELUG00000017824	vars2	96	73.950	ENSATEG00000012291	vars2	99	72.411	Anabas_testudineus
ENSELUG00000017824	vars2	96	53.125	ENSACAG00000022093	VARS2	95	53.220	Anolis_carolinensis
ENSELUG00000017824	vars2	98	51.251	ENSANAG00000038018	VARS2	93	52.128	Aotus_nancymaae
ENSELUG00000017824	vars2	99	71.297	ENSACLG00000018673	vars2	99	71.297	Astatotilapia_calliptera
ENSELUG00000017824	vars2	99	72.884	ENSAMXG00000017773	vars2	99	74.634	Astyanax_mexicanus
ENSELUG00000017824	vars2	97	51.737	ENSBTAG00000010698	VARS2	93	52.128	Bos_taurus
ENSELUG00000017824	vars2	96	51.270	ENSCJAG00000019826	VARS2	93	51.938	Callithrix_jacchus
ENSELUG00000017824	vars2	97	51.929	ENSCAFG00000000454	VARS2	93	52.780	Canis_familiaris
ENSELUG00000017824	vars2	87	53.403	ENSCAFG00020019387	VARS2	90	56.787	Canis_lupus_dingo
ENSELUG00000017824	vars2	97	51.643	ENSCHIG00000007847	VARS2	93	52.031	Capra_hircus
ENSELUG00000017824	vars2	96	51.740	ENSTSYG00000009904	VARS2	93	52.229	Carlito_syrichta
ENSELUG00000017824	vars2	88	52.391	ENSCAPG00000017770	VARS2	99	52.391	Cavia_aperea
ENSELUG00000017824	vars2	96	51.268	ENSCPOG00000021834	VARS2	92	52.657	Cavia_porcellus
ENSELUG00000017824	vars2	98	51.115	ENSCCAG00000037907	VARS2	93	52.182	Cebus_capucinus
ENSELUG00000017824	vars2	98	51.066	ENSCATG00000032554	VARS2	93	52.128	Cercocebus_atys
ENSELUG00000017824	vars2	97	51.354	ENSCLAG00000002889	VARS2	93	51.938	Chinchilla_lanigera
ENSELUG00000017824	vars2	98	51.074	ENSCSAG00000008327	VARS2	93	52.144	Chlorocebus_sabaeus
ENSELUG00000017824	vars2	92	54.121	ENSCPBG00000021502	VARS2	96	55.110	Chrysemys_picta_bellii
ENSELUG00000017824	vars2	98	50.880	ENSCANG00000014991	VARS2	92	51.934	Colobus_angolensis_palliatus
ENSELUG00000017824	vars2	97	51.318	ENSCGRG00001021535	Vars2	93	51.841	Cricetulus_griseus_chok1gshd
ENSELUG00000017824	vars2	97	51.318	ENSCGRG00000014112	Vars2	93	51.841	Cricetulus_griseus_crigri
ENSELUG00000017824	vars2	99	62.517	ENSCSEG00000015432	vars2	97	70.678	Cynoglossus_semilaevis
ENSELUG00000017824	vars2	66	71.448	ENSCVAG00000017765	vars2	98	71.448	Cyprinodon_variegatus
ENSELUG00000017824	vars2	99	71.009	ENSDARG00000056717	vars2	100	71.009	Danio_rerio
ENSELUG00000017824	vars2	80	49.773	ENSDORG00000008516	Vars2	93	49.773	Dipodomys_ordii
ENSELUG00000017824	vars2	96	46.337	ENSETEG00000014844	VARS2	93	46.563	Echinops_telfairi
ENSELUG00000017824	vars2	96	51.549	ENSEASG00005019997	VARS2	94	55.413	Equus_asinus_asinus
ENSELUG00000017824	vars2	96	51.737	ENSECAG00000018202	VARS2	93	52.321	Equus_caballus
ENSELUG00000017824	vars2	63	56.311	ENSEEUG00000012591	-	61	56.311	Erinaceus_europaeus
ENSELUG00000017824	vars2	97	50.800	ENSFCAG00000010531	VARS2	96	50.752	Felis_catus
ENSELUG00000017824	vars2	96	51.124	ENSFDAG00000017216	VARS2	93	51.688	Fukomys_damarensis
ENSELUG00000017824	vars2	93	65.818	ENSFHEG00000013932	vars2	98	65.818	Fundulus_heteroclitus
ENSELUG00000017824	vars2	90	71.226	ENSGMOG00000018960	vars2	99	71.226	Gadus_morhua
ENSELUG00000017824	vars2	93	67.590	ENSGAFG00000004737	vars2	92	67.590	Gambusia_affinis
ENSELUG00000017824	vars2	93	70.305	ENSGACG00000001464	vars2	99	70.305	Gasterosteus_aculeatus
ENSELUG00000017824	vars2	91	55.378	ENSGAGG00000011652	VARS2	98	55.378	Gopherus_agassizii
ENSELUG00000017824	vars2	96	51.082	ENSGGOG00000014587	VARS2	93	51.744	Gorilla_gorilla
ENSELUG00000017824	vars2	99	68.566	ENSHBUG00000002448	vars2	99	68.566	Haplochromis_burtoni
ENSELUG00000017824	vars2	96	51.552	ENSHGLG00000012886	VARS2	90	52.132	Heterocephalus_glaber_female
ENSELUG00000017824	vars2	96	51.458	ENSHGLG00100016535	VARS2	93	52.035	Heterocephalus_glaber_male
ENSELUG00000017824	vars2	69	68.568	ENSHCOG00000017907	vars2	98	68.568	Hippocampus_comes
ENSELUG00000017824	vars2	100	72.877	ENSIPUG00000015573	Vars2	99	72.968	Ictalurus_punctatus
ENSELUG00000017824	vars2	97	51.455	ENSSTOG00000009924	VARS2	92	52.750	Ictidomys_tridecemlineatus
ENSELUG00000017824	vars2	96	50.520	ENSJJAG00000011144	Vars2	92	51.768	Jaculus_jaculus
ENSELUG00000017824	vars2	96	69.694	ENSKMAG00000001393	vars2	99	67.828	Kryptolebias_marmoratus
ENSELUG00000017824	vars2	50	80.435	ENSLBEG00000005480	-	81	80.072	Labrus_bergylta
ENSELUG00000017824	vars2	99	68.344	ENSLBEG00000011949	vars2	99	68.344	Labrus_bergylta
ENSELUG00000017824	vars2	96	51.786	ENSLACG00000001576	-	97	52.395	Latimeria_chalumnae
ENSELUG00000017824	vars2	96	51.458	ENSLAFG00000015183	VARS2	93	52.035	Loxodonta_africana
ENSELUG00000017824	vars2	98	50.696	ENSMFAG00000042367	VARS2	93	51.845	Macaca_fascicularis
ENSELUG00000017824	vars2	98	50.789	ENSMMUG00000018609	VARS2	93	51.942	Macaca_mulatta
ENSELUG00000017824	vars2	98	50.882	ENSMNEG00000043163	VARS2	93	52.039	Macaca_nemestrina
ENSELUG00000017824	vars2	98	50.880	ENSMLEG00000041728	VARS2	91	52.031	Mandrillus_leucophaeus
ENSELUG00000017824	vars2	96	69.971	ENSMAMG00000020339	vars2	100	68.219	Mastacembelus_armatus
ENSELUG00000017824	vars2	99	71.205	ENSMZEG00005017669	vars2	99	71.205	Maylandia_zebra
ENSELUG00000017824	vars2	97	51.552	ENSMAUG00000018946	Vars2	93	51.985	Mesocricetus_auratus
ENSELUG00000017824	vars2	80	55.919	ENSMICG00000005365	VARS2	93	56.776	Microcebus_murinus
ENSELUG00000017824	vars2	89	58.417	ENSMOCG00000014607	Vars2	93	59.399	Microtus_ochrogaster
ENSELUG00000017824	vars2	93	70.294	ENSMMOG00000012122	vars2	99	68.532	Mola_mola
ENSELUG00000017824	vars2	93	51.412	ENSMODG00000015848	VARS2	92	51.357	Monodelphis_domestica
ENSELUG00000017824	vars2	93	71.275	ENSMALG00000009217	vars2	99	71.275	Monopterus_albus
ENSELUG00000017824	vars2	98	51.437	MGP_CAROLIEiJ_G0021529	Vars2	93	55.654	Mus_caroli
ENSELUG00000017824	vars2	97	51.692	ENSMUSG00000038838	Vars2	93	55.477	Mus_musculus
ENSELUG00000017824	vars2	97	51.831	MGP_PahariEiJ_G0020523	Vars2	93	55.779	Mus_pahari
ENSELUG00000017824	vars2	97	51.880	MGP_SPRETEiJ_G0022436	Vars2	93	55.654	Mus_spretus
ENSELUG00000017824	vars2	97	51.270	ENSMPUG00000011643	VARS2	93	51.744	Mustela_putorius_furo
ENSELUG00000017824	vars2	92	52.930	ENSMLUG00000002356	VARS2	87	53.474	Myotis_lucifugus
ENSELUG00000017824	vars2	96	47.814	ENSNGAG00000020607	Vars2	91	48.807	Nannospalax_galili
ENSELUG00000017824	vars2	72	64.088	ENSNBRG00000001624	vars2	60	64.088	Neolamprologus_brichardi
ENSELUG00000017824	vars2	95	50.962	ENSNLEG00000005625	VARS2	89	51.960	Nomascus_leucogenys
ENSELUG00000017824	vars2	76	56.500	ENSMEUG00000014475	VARS2	87	56.500	Notamacropus_eugenii
ENSELUG00000017824	vars2	87	55.330	ENSOPRG00000000682	VARS2	86	54.822	Ochotona_princeps
ENSELUG00000017824	vars2	96	51.744	ENSODEG00000017965	VARS2	94	52.459	Octodon_degus
ENSELUG00000017824	vars2	93	52.770	ENSONIG00000004734	vars2	99	52.770	Oreochromis_niloticus
ENSELUG00000017824	vars2	73	44.793	ENSOANG00000000398	-	92	44.793	Ornithorhynchus_anatinus
ENSELUG00000017824	vars2	97	47.765	ENSOCUG00000021496	VARS2	60	48.936	Oryctolagus_cuniculus
ENSELUG00000017824	vars2	94	67.899	ENSORLG00000010632	vars2	99	66.300	Oryzias_latipes
ENSELUG00000017824	vars2	99	66.484	ENSORLG00020018584	vars2	99	66.484	Oryzias_latipes_hni
ENSELUG00000017824	vars2	94	68.719	ENSORLG00015010408	vars2	99	66.758	Oryzias_latipes_hsok
ENSELUG00000017824	vars2	95	68.279	ENSOMEG00000008360	vars2	99	66.606	Oryzias_melastigma
ENSELUG00000017824	vars2	96	50.951	ENSOGAG00000006087	VARS2	91	51.257	Otolemur_garnettii
ENSELUG00000017824	vars2	97	51.032	ENSOARG00000010844	VARS2	92	51.401	Ovis_aries
ENSELUG00000017824	vars2	98	50.882	ENSPPAG00000041141	VARS2	93	51.744	Pan_paniscus
ENSELUG00000017824	vars2	97	50.988	ENSPPRG00000006751	VARS2	91	51.453	Panthera_pardus
ENSELUG00000017824	vars2	97	50.894	ENSPTIG00000017799	VARS2	97	51.359	Panthera_tigris_altaica
ENSELUG00000017824	vars2	98	50.882	ENSPTRG00000034497	VARS2	93	51.744	Pan_troglodytes
ENSELUG00000017824	vars2	98	51.066	ENSPANG00000018481	VARS2	93	53.367	Papio_anubis
ENSELUG00000017824	vars2	99	70.615	ENSPKIG00000011372	vars2	99	70.799	Paramormyrops_kingsleyae
ENSELUG00000017824	vars2	58	63.994	ENSPSIG00000006206	VARS2	92	63.790	Pelodiscus_sinensis
ENSELUG00000017824	vars2	100	68.282	ENSPMGG00000000465	vars2	99	68.282	Periophthalmus_magnuspinnatus
ENSELUG00000017824	vars2	97	51.169	ENSPEMG00000014691	Vars2	94	51.781	Peromyscus_maniculatus_bairdii
ENSELUG00000017824	vars2	97	52.162	ENSPCIG00000015040	VARS2	93	52.976	Phascolarctos_cinereus
ENSELUG00000017824	vars2	94	68.054	ENSPFOG00000017616	vars2	94	68.054	Poecilia_formosa
ENSELUG00000017824	vars2	99	66.728	ENSPLAG00000019778	vars2	99	66.728	Poecilia_latipinna
ENSELUG00000017824	vars2	99	66.026	ENSPMEG00000011123	vars2	99	66.026	Poecilia_mexicana
ENSELUG00000017824	vars2	91	61.871	ENSPREG00000014998	vars2	99	59.001	Poecilia_reticulata
ENSELUG00000017824	vars2	98	50.604	ENSPPYG00000016424	VARS2	93	51.647	Pongo_abelii
ENSELUG00000017824	vars2	63	54.500	ENSPCAG00000006946	VARS2	63	54.500	Procavia_capensis
ENSELUG00000017824	vars2	96	50.803	ENSPCOG00000014839	VARS2	90	51.265	Propithecus_coquereli
ENSELUG00000017824	vars2	96	51.426	ENSPVAG00000004197	VARS2	93	51.644	Pteropus_vampyrus
ENSELUG00000017824	vars2	86	78.706	ENSPNYG00000010314	vars2	99	78.706	Pundamilia_nyererei
ENSELUG00000017824	vars2	99	72.273	ENSPNAG00000026793	vars2	99	72.678	Pygocentrus_nattereri
ENSELUG00000017824	vars2	97	51.507	ENSRNOG00000000833	Vars2	93	52.132	Rattus_norvegicus
ENSELUG00000017824	vars2	98	50.880	ENSRBIG00000032725	VARS2	93	51.934	Rhinopithecus_bieti
ENSELUG00000017824	vars2	98	50.880	ENSRROG00000043847	VARS2	93	51.934	Rhinopithecus_roxellana
ENSELUG00000017824	vars2	98	50.045	ENSSBOG00000033240	VARS2	91	50.854	Saimiri_boliviensis_boliviensis
ENSELUG00000017824	vars2	97	51.407	ENSSHAG00000009307	VARS2	92	52.699	Sarcophilus_harrisii
ENSELUG00000017824	vars2	100	68.517	ENSSFOG00015016187	vars2	99	68.517	Scleropages_formosus
ENSELUG00000017824	vars2	99	70.718	ENSSMAG00000020842	vars2	99	72.852	Scophthalmus_maximus
ENSELUG00000017824	vars2	99	71.179	ENSSDUG00000011598	vars2	99	71.717	Seriola_dumerili
ENSELUG00000017824	vars2	99	69.089	ENSSLDG00000015492	vars2	99	69.457	Seriola_lalandi_dorsalis
ENSELUG00000017824	vars2	51	60.741	ENSSARG00000003786	-	61	60.741	Sorex_araneus
ENSELUG00000017824	vars2	79	60.441	ENSSPUG00000014700	VARS2	87	60.441	Sphenodon_punctatus
ENSELUG00000017824	vars2	99	67.367	ENSSPAG00000004654	vars2	99	67.367	Stegastes_partitus
ENSELUG00000017824	vars2	97	51.538	ENSSSCG00000001384	VARS2	93	54.357	Sus_scrofa
ENSELUG00000017824	vars2	95	68.956	ENSTRUG00000005264	vars2	99	67.897	Takifugu_rubripes
ENSELUG00000017824	vars2	97	67.894	ENSTNIG00000005916	vars2	97	68.362	Tetraodon_nigroviridis
ENSELUG00000017824	vars2	97	44.079	ENSTTRG00000012243	VARS2	93	44.530	Tursiops_truncatus
ENSELUG00000017824	vars2	97	51.362	ENSUAMG00000026124	VARS2	99	52.892	Ursus_americanus
ENSELUG00000017824	vars2	97	51.552	ENSUMAG00000019894	VARS2	94	51.121	Ursus_maritimus
ENSELUG00000017824	vars2	96	51.834	ENSVVUG00000010754	VARS2	88	52.585	Vulpes_vulpes
ENSELUG00000017824	vars2	88	52.053	ENSXETG00000003036	vars2	98	52.053	Xenopus_tropicalis
ENSELUG00000017824	vars2	97	66.290	ENSXCOG00000003455	vars2	99	66.384	Xiphophorus_couchianus
ENSELUG00000017824	vars2	99	66.851	ENSXMAG00000013523	vars2	99	66.851	Xiphophorus_maculatus