EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSELUG00000017963 (Gene tree)
Gene ID
105022924
Gene Symbol
rbfox3b
Alias
rbfox3l|si:ch73-322f21.1
Full Name
RNA binding protein fox-1 homolog 3
Gene Type
protein_coding
Species
Esox_lucius
Status
putative
Strand
Plus strand
Length
302593 bases
Position
chrLG11:28325893-28628485
Accession
105022924
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSELUP00000018376Fox-1_CPF12414.82.1e-4311
ENSELUP00000018392Fox-1_CPF12414.82.1e-4311
ENSELUP00000018389Fox-1_CPF12414.82.5e-4311
ENSELUP00000018353Fox-1_CPF12414.82.9e-4311
ENSELUP00000038070Fox-1_CPF12414.83.8e-4311
ENSELUP00000018345Fox-1_CPF12414.86.4e-4311
ENSELUP00000018322Fox-1_CPF12414.82.6e-2211
ENSELUP00000018322RRM_1PF00076.221.6e-1811
ENSELUP00000018389RRM_1PF00076.222.1e-1811
ENSELUP00000018376RRM_1PF00076.222.3e-1811
ENSELUP00000018392RRM_1PF00076.222.3e-1811
ENSELUP00000038070RRM_1PF00076.222.3e-1811
ENSELUP00000018353RRM_1PF00076.220.0001311
ENSELUP00000018345RRM_1PF00076.220.0001411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSELUT00000028234-6192XM_010891693ENSELUP00000018376381 (aa)XP_010889995UPI0005769E49
ENSELUT00000028248-1984-ENSELUP00000018389367 (aa)-UPI000577B5CA
ENSELUT00000028195-5747XM_010891695ENSELUP00000038070379 (aa)XP_010889997UPI000577756A
ENSELUT00000028202-1253-ENSELUP00000018345295 (aa)--
ENSELUT00000028168-927-ENSELUP00000018322308 (aa)--
ENSELUT00000028207-1678-ENSELUP00000018353281 (aa)--
ENSELUT00000040562-5698XM_010891694ENSELUP00000018392381 (aa)XP_010889996UPI0005769E49
Gene Model
Click here to download ENSELUG00000017963's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000017963's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSELUG00000017963rbfox3b9543.344ENSELUG00000000102rbfox210066.667
ENSELUG00000017963rbfox3b10046.290ENSELUG00000013096rbfox19958.879
ENSELUG00000017963rbfox3b7754.196ENSELUG00000009404-8952.691
ENSELUG00000017963rbfox3b6067.568ENSELUG00000009807-6457.589
ENSELUG00000017963rbfox3b9552.618ENSELUG00000015077rbfox1l10053.518
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSELUG00000017963rbfox3b9569.000ENSG00000167281RBFOX39990.541Homo_sapiens
ENSELUG00000017963rbfox3b9769.003ENSAPOG00000015658-9269.272Acanthochromis_polyacanthus
ENSELUG00000017963rbfox3b10095.013ENSAPOG00000021630rbfox3b10095.013Acanthochromis_polyacanthus
ENSELUG00000017963rbfox3b8974.713ENSAMEG00000014170RBFOX39972.051Ailuropoda_melanoleuca
ENSELUG00000017963rbfox3b9173.786ENSACIG00000003768-8774.434Amphilophus_citrinellus
ENSELUG00000017963rbfox3b10080.769ENSACIG00000010817rbfox3b10090.159Amphilophus_citrinellus
ENSELUG00000017963rbfox3b9778.649ENSAOCG00000010786-9879.459Amphiprion_ocellaris
ENSELUG00000017963rbfox3b10094.823ENSAOCG00000012358rbfox3b10094.823Amphiprion_ocellaris
ENSELUG00000017963rbfox3b9785.054ENSAPEG00000019081rbfox3b10084.511Amphiprion_percula
ENSELUG00000017963rbfox3b9572.642ENSAPEG00000015891-9470.942Amphiprion_percula
ENSELUG00000017963rbfox3b10075.146ENSATEG00000019945rbfox3b10084.638Anabas_testudineus
ENSELUG00000017963rbfox3b9670.297ENSATEG00000023101-9779.560Anabas_testudineus
ENSELUG00000017963rbfox3b9480.000ENSACAG00000016093RBFOX39981.944Anolis_carolinensis
ENSELUG00000017963rbfox3b9568.667ENSANAG00000023457RBFOX310081.587Aotus_nancymaae
ENSELUG00000017963rbfox3b10093.455ENSACLG00000020011rbfox3b10094.241Astatotilapia_calliptera
ENSELUG00000017963rbfox3b10081.818ENSACLG00000025552-10081.744Astatotilapia_calliptera
ENSELUG00000017963rbfox3b10081.432ENSAMXG00000037246rbfox3a10083.871Astyanax_mexicanus
ENSELUG00000017963rbfox3b9980.759ENSAMXG00000042841rbfox3b10085.028Astyanax_mexicanus
ENSELUG00000017963rbfox3b9564.873ENSBTAG00000006280RBFOX310069.486Bos_taurus
ENSELUG00000017963rbfox3b9564.241ENSCJAG00000009563RBFOX310071.191Callithrix_jacchus
ENSELUG00000017963rbfox3b6583.750ENSCAFG00000005547RBFOX39979.004Canis_familiaris
ENSELUG00000017963rbfox3b9564.557ENSCAFG00020008126RBFOX310072.074Canis_lupus_dingo
ENSELUG00000017963rbfox3b9564.557ENSCHIG00000009124RBFOX310072.074Capra_hircus
ENSELUG00000017963rbfox3b9564.353ENSTSYG00000029617RBFOX310071.271Carlito_syrichta
ENSELUG00000017963rbfox3b9565.831ENSCPOG00000021703RBFOX310070.976Cavia_porcellus
ENSELUG00000017963rbfox3b9568.667ENSCCAG00000028450RBFOX310081.587Cebus_capucinus
ENSELUG00000017963rbfox3b9569.000ENSCATG00000018349RBFOX310081.905Cercocebus_atys
ENSELUG00000017963rbfox3b9566.246ENSCLAG00000006449RBFOX310071.353Chinchilla_lanigera
ENSELUG00000017963rbfox3b9569.000ENSCSAG00000002355RBFOX310081.905Chlorocebus_sabaeus
ENSELUG00000017963rbfox3b8983.728ENSCPBG00000010904RBFOX310083.067Chrysemys_picta_bellii
ENSELUG00000017963rbfox3b9569.000ENSCANG00000043120RBFOX310081.905Colobus_angolensis_palliatus
ENSELUG00000017963rbfox3b9564.038ENSCGRG00001019476Rbfox310071.353Cricetulus_griseus_chok1gshd
ENSELUG00000017963rbfox3b9564.038ENSCGRG00000003268Rbfox310071.353Cricetulus_griseus_crigri
ENSELUG00000017963rbfox3b9971.466ENSCSEG00000020606RBFOX310073.442Cynoglossus_semilaevis
ENSELUG00000017963rbfox3b9980.163ENSCSEG00000015567RBFOX39880.376Cynoglossus_semilaevis
ENSELUG00000017963rbfox3b10094.823ENSCVAG00000006882rbfox3b10094.823Cyprinodon_variegatus
ENSELUG00000017963rbfox3b10081.698ENSDARG00000010083rbfox3a10084.367Danio_rerio
ENSELUG00000017963rbfox3b10082.095ENSDARG00000074310rbfox3b9793.264Danio_rerio
ENSELUG00000017963rbfox3b5585.294ENSDNOG00000039391RBFOX310058.442Dasypus_novemcinctus
ENSELUG00000017963rbfox3b9557.508ENSDORG00000005352Rbfox310065.952Dipodomys_ordii
ENSELUG00000017963rbfox3b8854.167ENSEBUG00000013559RBFOX38854.341Eptatretus_burgeri
ENSELUG00000017963rbfox3b10061.404ENSEBUG00000002129RBFOX310069.101Eptatretus_burgeri
ENSELUG00000017963rbfox3b9569.205ENSEASG00005005059RBFOX310081.388Equus_asinus_asinus
ENSELUG00000017963rbfox3b9568.874ENSECAG00000023811RBFOX310081.073Equus_caballus
ENSELUG00000017963rbfox3b8380.000ENSEEUG00000013974RBFOX37688.000Erinaceus_europaeus
ENSELUG00000017963rbfox3b9478.611ENSFCAG00000002555RBFOX310081.763Felis_catus
ENSELUG00000017963rbfox3b9065.110ENSFALG00000012288RBFOX39963.457Ficedula_albicollis
ENSELUG00000017963rbfox3b9560.188ENSFDAG00000007489RBFOX310066.227Fukomys_damarensis
ENSELUG00000017963rbfox3b10094.662ENSFHEG00000008550rbfox3b10094.662Fundulus_heteroclitus
ENSELUG00000017963rbfox3b10060.160ENSGMOG00000019304-10068.449Gadus_morhua
ENSELUG00000017963rbfox3b9481.006ENSGALG00000032889RBFOX39983.240Gallus_gallus
ENSELUG00000017963rbfox3b10088.011ENSGAFG00000005025rbfox3b10088.011Gambusia_affinis
ENSELUG00000017963rbfox3b9563.085ENSGACG00000002138-10072.487Gasterosteus_aculeatus
ENSELUG00000017963rbfox3b9883.288ENSGAGG00000020025RBFOX310083.067Gopherus_agassizii
ENSELUG00000017963rbfox3b9569.000ENSGGOG00000012546RBFOX310081.905Gorilla_gorilla
ENSELUG00000017963rbfox3b10073.780ENSHBUG00000023098-9982.370Haplochromis_burtoni
ENSELUG00000017963rbfox3b10093.701ENSHBUG00000018099rbfox3b10094.488Haplochromis_burtoni
ENSELUG00000017963rbfox3b9565.421ENSHGLG00000008679RBFOX310070.341Heterocephalus_glaber_female
ENSELUG00000017963rbfox3b9561.682ENSHGLG00100014739RBFOX310067.454Heterocephalus_glaber_male
ENSELUG00000017963rbfox3b9877.839ENSHCOG00000007444RBFOX39478.495Hippocampus_comes
ENSELUG00000017963rbfox3b10064.650ENSHCOG00000001863RBFOX39374.132Hippocampus_comes
ENSELUG00000017963rbfox3b8483.333ENSIPUG00000021966rbfox3b9884.674Ictalurus_punctatus
ENSELUG00000017963rbfox3b10081.586ENSIPUG00000012010rbfox3a10083.887Ictalurus_punctatus
ENSELUG00000017963rbfox3b9558.608ENSSTOG00000026817RBFOX310066.667Ictidomys_tridecemlineatus
ENSELUG00000017963rbfox3b9563.924ENSJJAG00000014167Rbfox310072.340Jaculus_jaculus
ENSELUG00000017963rbfox3b10094.823ENSKMAG00000006726rbfox3b10094.823Kryptolebias_marmoratus
ENSELUG00000017963rbfox3b10086.059ENSLBEG00000022508-10086.104Labrus_bergylta
ENSELUG00000017963rbfox3b10093.931ENSLBEG00000004030rbfox3b10093.931Labrus_bergylta
ENSELUG00000017963rbfox3b8871.268ENSLACG00000018409-10069.620Latimeria_chalumnae
ENSELUG00000017963rbfox3b5760.326ENSLACG00000000021-9562.162Latimeria_chalumnae
ENSELUG00000017963rbfox3b8886.503ENSLOCG00000012267rbfox3a9888.957Lepisosteus_oculatus
ENSELUG00000017963rbfox3b8972.346ENSLAFG00000016623RBFOX310071.543Loxodonta_africana
ENSELUG00000017963rbfox3b9562.222ENSMFAG00000002247RBFOX310071.468Macaca_fascicularis
ENSELUG00000017963rbfox3b9569.000ENSMMUG00000023028RBFOX310081.905Macaca_mulatta
ENSELUG00000017963rbfox3b9568.667ENSMNEG00000041147RBFOX310081.587Macaca_nemestrina
ENSELUG00000017963rbfox3b9569.000ENSMLEG00000025686RBFOX310081.905Mandrillus_leucophaeus
ENSELUG00000017963rbfox3b10075.641ENSMAMG00000019810rbfox3b10085.079Mastacembelus_armatus
ENSELUG00000017963rbfox3b9180.546ENSMAMG00000020600-9979.023Mastacembelus_armatus
ENSELUG00000017963rbfox3b10093.701ENSMZEG00005000781rbfox3b10094.488Maylandia_zebra
ENSELUG00000017963rbfox3b9365.000ENSMZEG00005003055-6680.745Maylandia_zebra
ENSELUG00000017963rbfox3b6977.828ENSMGAG00000005600RBFOX38379.545Meleagris_gallopavo
ENSELUG00000017963rbfox3b9565.190ENSMAUG00000013543Rbfox310071.011Mesocricetus_auratus
ENSELUG00000017963rbfox3b10071.975ENSMICG00000014898RBFOX310081.210Microcebus_murinus
ENSELUG00000017963rbfox3b9563.291ENSMOCG00000015373Rbfox310070.745Microtus_ochrogaster
ENSELUG00000017963rbfox3b10092.954ENSMMOG00000020193rbfox3b10092.954Mola_mola
ENSELUG00000017963rbfox3b9478.830ENSMODG00000002089RBFOX39981.058Monodelphis_domestica
ENSELUG00000017963rbfox3b10082.940ENSMALG00000018270-10083.727Monopterus_albus
ENSELUG00000017963rbfox3b10094.005ENSMALG00000020407rbfox3b10094.005Monopterus_albus
ENSELUG00000017963rbfox3b9568.471MGP_CAROLIEiJ_G0017487Rbfox39688.489Mus_caroli
ENSELUG00000017963rbfox3b9570.476ENSMUSG00000025576Rbfox39688.489Mus_musculus
ENSELUG00000017963rbfox3b9569.206MGP_PahariEiJ_G0018614Rbfox39689.209Mus_pahari
ENSELUG00000017963rbfox3b9568.790MGP_SPRETEiJ_G0018331Rbfox39688.489Mus_spretus
ENSELUG00000017963rbfox3b9072.178ENSMPUG00000012319RBFOX39974.278Mustela_putorius_furo
ENSELUG00000017963rbfox3b9564.038ENSNGAG00000018006Rbfox310071.618Nannospalax_galili
ENSELUG00000017963rbfox3b10066.346ENSNBRG00000022885-9275.000Neolamprologus_brichardi
ENSELUG00000017963rbfox3b10092.371ENSNBRG00000010102rbfox3b10093.188Neolamprologus_brichardi
ENSELUG00000017963rbfox3b8554.459ENSNLEG00000000153-9654.603Nomascus_leucogenys
ENSELUG00000017963rbfox3b9546.087ENSMEUG00000004218-10053.611Notamacropus_eugenii
ENSELUG00000017963rbfox3b6885.000ENSOPRG00000016279-7186.667Ochotona_princeps
ENSELUG00000017963rbfox3b9570.764ENSODEG00000009433RBFOX310081.013Octodon_degus
ENSELUG00000017963rbfox3b10095.095ENSONIG00000009549rbfox3b10095.095Oreochromis_niloticus
ENSELUG00000017963rbfox3b10073.248ENSONIG00000007282-9881.194Oreochromis_niloticus
ENSELUG00000017963rbfox3b6066.038ENSOCUG00000014217RBFOX37466.038Oryctolagus_cuniculus
ENSELUG00000017963rbfox3b10095.013ENSORLG00000000905rbfox3b7993.151Oryzias_latipes
ENSELUG00000017963rbfox3b10095.013ENSORLG00020018030rbfox3b9993.151Oryzias_latipes_hni
ENSELUG00000017963rbfox3b10095.095ENSORLG00015009200rbfox3b10095.095Oryzias_latipes_hsok
ENSELUG00000017963rbfox3b8189.776ENSOMEG00000014677rbfox3b8689.362Oryzias_melastigma
ENSELUG00000017963rbfox3b8878.395ENSOGAG00000029595RBFOX39874.932Otolemur_garnettii
ENSELUG00000017963rbfox3b8758.807ENSOARG00000002908RBFOX310057.179Ovis_aries
ENSELUG00000017963rbfox3b7976.494ENSPPAG00000025383RBFOX39981.250Pan_paniscus
ENSELUG00000017963rbfox3b9564.516ENSPPRG00000007819RBFOX310072.394Panthera_pardus
ENSELUG00000017963rbfox3b9569.000ENSPTRG00000009727RBFOX310081.905Pan_troglodytes
ENSELUG00000017963rbfox3b9569.000ENSPANG00000019837RBFOX310081.905Papio_anubis
ENSELUG00000017963rbfox3b10069.257ENSPKIG00000022633-9969.437Paramormyrops_kingsleyae
ENSELUG00000017963rbfox3b10086.856ENSPKIG00000010299rbfox3a9986.705Paramormyrops_kingsleyae
ENSELUG00000017963rbfox3b8790.441ENSPMGG00000008000rbfox3b10089.474Periophthalmus_magnuspinnatus
ENSELUG00000017963rbfox3b9563.608ENSPEMG00000010500Rbfox310071.011Peromyscus_maniculatus_bairdii
ENSELUG00000017963rbfox3b5473.295ENSPMAG00000008689rbfox3b9977.941Petromyzon_marinus
ENSELUG00000017963rbfox3b9579.104ENSPCIG00000005766RBFOX310080.565Phascolarctos_cinereus
ENSELUG00000017963rbfox3b10095.013ENSPFOG00000018294rbfox3b10095.013Poecilia_formosa
ENSELUG00000017963rbfox3b6695.050ENSPLAG00000000481rbfox3b7891.700Poecilia_latipinna
ENSELUG00000017963rbfox3b10094.306ENSPMEG00000022997rbfox3b10094.306Poecilia_mexicana
ENSELUG00000017963rbfox3b10094.565ENSPREG00000012886rbfox3b10094.340Poecilia_reticulata
ENSELUG00000017963rbfox3b8870.863ENSPPYG00000008704RBFOX310070.088Pongo_abelii
ENSELUG00000017963rbfox3b7577.824ENSPCAG00000001401RBFOX310069.806Procavia_capensis
ENSELUG00000017963rbfox3b10064.653ENSPCOG00000012689RBFOX310070.360Propithecus_coquereli
ENSELUG00000017963rbfox3b9550.432ENSPVAG00000015243RBFOX310063.536Pteropus_vampyrus
ENSELUG00000017963rbfox3b9876.667ENSPNYG00000009079-9776.486Pundamilia_nyererei
ENSELUG00000017963rbfox3b9781.522ENSPNYG00000010414rbfox3b10081.522Pundamilia_nyererei
ENSELUG00000017963rbfox3b10084.321ENSPNAG00000002889rbfox3a10084.715Pygocentrus_nattereri
ENSELUG00000017963rbfox3b10078.648ENSPNAG00000018173rbfox3b9178.799Pygocentrus_nattereri
ENSELUG00000017963rbfox3b9568.106ENSRNOG00000003386Rbfox310080.696Rattus_norvegicus
ENSELUG00000017963rbfox3b9478.611ENSRBIG00000040449RBFOX39980.833Rhinopithecus_bieti
ENSELUG00000017963rbfox3b9569.000ENSRROG00000000766RBFOX310081.905Rhinopithecus_roxellana
ENSELUG00000017963rbfox3b9568.667ENSSBOG00000031591RBFOX310081.587Saimiri_boliviensis_boliviensis
ENSELUG00000017963rbfox3b9579.104ENSSHAG00000016076RBFOX310080.565Sarcophilus_harrisii
ENSELUG00000017963rbfox3b10084.536ENSSFOG00015023260rbfox3a10086.598Scleropages_formosus
ENSELUG00000017963rbfox3b9572.161ENSSFOG00015004716RBFOX39972.376Scleropages_formosus
ENSELUG00000017963rbfox3b10083.039ENSSMAG00000019052-10084.395Scophthalmus_maximus
ENSELUG00000017963rbfox3b10089.323ENSSMAG00000012618rbfox3b8790.625Scophthalmus_maximus
ENSELUG00000017963rbfox3b9778.830ENSSDUG00000015801-9977.628Seriola_dumerili
ENSELUG00000017963rbfox3b10094.662ENSSDUG00000023183rbfox3b10094.662Seriola_dumerili
ENSELUG00000017963rbfox3b10095.095ENSSLDG00000000149rbfox3b10095.095Seriola_lalandi_dorsalis
ENSELUG00000017963rbfox3b9782.173ENSSLDG00000016098-9980.863Seriola_lalandi_dorsalis
ENSELUG00000017963rbfox3b9582.772ENSSPUG00000011733RBFOX39983.758Sphenodon_punctatus
ENSELUG00000017963rbfox3b8569.650ENSSPAG00000004898-8577.003Stegastes_partitus
ENSELUG00000017963rbfox3b9785.054ENSSPAG00000017571rbfox3b10085.054Stegastes_partitus
ENSELUG00000017963rbfox3b8569.118ENSSSCG00000039498RBFOX310071.471Sus_scrofa
ENSELUG00000017963rbfox3b10077.381ENSTRUG00000004894rbfox3b9786.744Takifugu_rubripes
ENSELUG00000017963rbfox3b10075.291ENSTNIG00000011278rbfox3b10078.750Tetraodon_nigroviridis
ENSELUG00000017963rbfox3b6755.273ENSTBEG00000004296-10049.731Tupaia_belangeri
ENSELUG00000017963rbfox3b9655.301ENSTTRG00000003676RBFOX310066.205Tursiops_truncatus
ENSELUG00000017963rbfox3b9569.000ENSUAMG00000004668RBFOX310081.905Ursus_americanus
ENSELUG00000017963rbfox3b9479.167ENSVVUG00000017864RBFOX310081.905Vulpes_vulpes
ENSELUG00000017963rbfox3b10058.160ENSXETG00000020236rbfox39863.144Xenopus_tropicalis
ENSELUG00000017963rbfox3b9893.352ENSXCOG00000018262rbfox3b10093.352Xiphophorus_couchianus
ENSELUG00000017963rbfox3b10095.276ENSXMAG00000012939rbfox3b10095.276Xiphophorus_maculatus

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