EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000018055 (Gene tree)
Gene ID: 105012725
Gene Symbol: ercc2
Alias: XPD|zgc:56365
Full Name: ERCC excision repair 2%2C TFIIH core complex helicase subunit
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 10243 bases
Position: chrLG01:6378877-6389119
Accession: 105012725
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000038188	ResIII	PF04851.15	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000040615	-	4385	XM_010873757	ENSELUP00000038196	760 (aa)	XP_010872059	UPI0005767D3E
ENSELUT00000028398	-	1998	-	ENSELUP00000038188	665 (aa)	-	-

Gene Model

Click here to download ENSELUG00000018055's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03022	Basal transcription factors	KEGG
els03420	Nucleotide excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000018055's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000018055	ercc2	100	83.654	ENSG00000104884	ERCC2	98	83.609	Homo_sapiens
ENSELUG00000018055	ercc2	99	93.062	ENSAPOG00000000375	ercc2	99	93.062	Acanthochromis_polyacanthus
ENSELUG00000018055	ercc2	99	93.524	ENSACIG00000008002	ercc2	98	93.524	Amphilophus_citrinellus
ENSELUG00000018055	ercc2	99	91.291	ENSAOCG00000016153	ercc2	99	91.291	Amphiprion_ocellaris
ENSELUG00000018055	ercc2	99	91.141	ENSAPEG00000016712	ercc2	99	91.141	Amphiprion_percula
ENSELUG00000018055	ercc2	99	93.524	ENSATEG00000005268	ercc2	97	93.524	Anabas_testudineus
ENSELUG00000018055	ercc2	100	83.459	ENSANAG00000022694	ERCC2	98	83.459	Aotus_nancymaae
ENSELUG00000018055	ercc2	99	93.514	ENSACLG00000017573	ercc2	99	93.514	Astatotilapia_calliptera
ENSELUG00000018055	ercc2	99	94.578	ENSAMXG00000009052	ercc2	99	94.578	Astyanax_mexicanus
ENSELUG00000018055	ercc2	100	83.759	ENSCJAG00000012716	ERCC2	98	83.759	Callithrix_jacchus
ENSELUG00000018055	ercc2	100	84.211	ENSCAFG00020011390	ERCC2	98	84.211	Canis_lupus_dingo
ENSELUG00000018055	ercc2	99	66.818	ENSTSYG00000026723	ERCC2	99	66.667	Carlito_syrichta
ENSELUG00000018055	ercc2	100	81.642	ENSCCAG00000019831	ERCC2	97	81.642	Cebus_capucinus
ENSELUG00000018055	ercc2	100	83.759	ENSCANG00000040683	ERCC2	98	83.759	Colobus_angolensis_palliatus
ENSELUG00000018055	ercc2	99	88.855	ENSCSEG00000006041	ercc2	99	88.855	Cynoglossus_semilaevis
ENSELUG00000018055	ercc2	100	82.256	ENSEASG00005013856	ERCC2	98	82.256	Equus_asinus_asinus
ENSELUG00000018055	ercc2	100	84.211	ENSFCAG00000002679	ERCC2	98	84.211	Felis_catus
ENSELUG00000018055	ercc2	99	92.922	ENSFHEG00000000072	ercc2	97	92.922	Fundulus_heteroclitus
ENSELUG00000018055	ercc2	100	84.233	ENSGAGG00000009493	ERCC2	98	84.233	Gopherus_agassizii
ENSELUG00000018055	ercc2	100	83.759	ENSGGOG00000015842	ERCC2	98	83.759	Gorilla_gorilla
ENSELUG00000018055	ercc2	99	92.654	ENSHBUG00000002187	ercc2	99	92.654	Haplochromis_burtoni
ENSELUG00000018055	ercc2	99	92.169	ENSLBEG00000010573	ercc2	90	92.169	Labrus_bergylta
ENSELUG00000018055	ercc2	100	83.759	ENSMFAG00000037898	ERCC2	98	83.759	Macaca_fascicularis
ENSELUG00000018055	ercc2	100	83.759	ENSMMUG00000014419	ERCC2	98	83.759	Macaca_mulatta
ENSELUG00000018055	ercc2	100	83.759	ENSMNEG00000042641	ERCC2	98	83.759	Macaca_nemestrina
ENSELUG00000018055	ercc2	99	83.861	ENSMLEG00000043492	ERCC2	97	83.861	Mandrillus_leucophaeus
ENSELUG00000018055	ercc2	99	92.922	ENSMAMG00000016724	ercc2	98	92.922	Mastacembelus_armatus
ENSELUG00000018055	ercc2	99	93.524	ENSMZEG00005024441	ercc2	99	93.524	Maylandia_zebra
ENSELUG00000018055	ercc2	100	83.609	ENSMICG00000000635	ERCC2	98	83.609	Microcebus_murinus
ENSELUG00000018055	ercc2	99	88.855	ENSMMOG00000005162	ercc2	97	88.855	Mola_mola
ENSELUG00000018055	ercc2	99	92.018	ENSMALG00000005990	ercc2	98	92.018	Monopterus_albus
ENSELUG00000018055	ercc2	100	84.511	MGP_CAROLIEiJ_G0029287	Ercc2	97	84.511	Mus_caroli
ENSELUG00000018055	ercc2	100	84.511	ENSMUSG00000030400	Ercc2	97	84.511	Mus_musculus
ENSELUG00000018055	ercc2	100	84.511	MGP_PahariEiJ_G0021147	Ercc2	97	84.511	Mus_pahari
ENSELUG00000018055	ercc2	100	84.662	MGP_SPRETEiJ_G0030371	Ercc2	97	84.662	Mus_spretus
ENSELUG00000018055	ercc2	100	83.759	ENSPPAG00000044005	ERCC2	98	83.759	Pan_paniscus
ENSELUG00000018055	ercc2	100	79.699	ENSPPRG00000000507	ERCC2	98	80.000	Panthera_pardus
ENSELUG00000018055	ercc2	100	83.759	ENSPTRG00000011149	ERCC2	98	83.759	Pan_troglodytes
ENSELUG00000018055	ercc2	99	83.861	ENSPANG00000032195	ERCC2	97	83.861	Papio_anubis
ENSELUG00000018055	ercc2	99	90.964	ENSPKIG00000006883	ercc2	96	90.964	Paramormyrops_kingsleyae
ENSELUG00000018055	ercc2	99	90.964	ENSPMGG00000000223	ercc2	99	90.964	Periophthalmus_magnuspinnatus
ENSELUG00000018055	ercc2	99	92.922	ENSPLAG00000002626	ercc2	97	92.922	Poecilia_latipinna
ENSELUG00000018055	ercc2	99	92.922	ENSPMEG00000002858	ercc2	97	92.922	Poecilia_mexicana
ENSELUG00000018055	ercc2	99	88.253	ENSPREG00000019280	ercc2	97	88.253	Poecilia_reticulata
ENSELUG00000018055	ercc2	99	92.793	ENSPNYG00000022007	ercc2	99	92.793	Pundamilia_nyererei
ENSELUG00000018055	ercc2	100	93.534	ENSPNAG00000010434	ercc2	100	93.534	Pygocentrus_nattereri
ENSELUG00000018055	ercc2	100	83.759	ENSRROG00000040423	ERCC2	98	83.759	Rhinopithecus_roxellana
ENSELUG00000018055	ercc2	100	83.910	ENSSBOG00000030257	ERCC2	98	83.910	Saimiri_boliviensis_boliviensis
ENSELUG00000018055	ercc2	99	86.996	ENSSMAG00000019720	ercc2	99	86.996	Scophthalmus_maximus
ENSELUG00000018055	ercc2	99	92.771	ENSSDUG00000002397	ercc2	99	92.771	Seriola_dumerili
ENSELUG00000018055	ercc2	99	92.922	ENSSLDG00000020353	ercc2	99	92.922	Seriola_lalandi_dorsalis
ENSELUG00000018055	ercc2	99	92.620	ENSSPAG00000002074	ercc2	98	92.620	Stegastes_partitus
ENSELUG00000018055	ercc2	99	91.867	ENSTRUG00000007303	ercc2	98	91.867	Takifugu_rubripes
ENSELUG00000018055	ercc2	100	83.910	ENSUAMG00000019562	ERCC2	98	83.910	Ursus_americanus
ENSELUG00000018055	ercc2	99	88.404	ENSXMAG00000003922	ercc2	97	88.404	Xiphophorus_maculatus