EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000018071 (Gene tree)
Gene ID: 105027163
Gene Symbol: yrdc
Alias: zgc:162301
Full Name: yrdC N6-threonylcarbamoyltransferase domain containing
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 13917 bases
Position: chrLG20:6315179-6329095
Accession: 105027163
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000018596	Sua5_yciO_yrdC	PF01300.18	8.2e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000028521	-	4892	XM_010899113	ENSELUP00000018596	303 (aa)	XP_010897415	UPI000576539F

Gene Model

Click here to download ENSELUG00000018071's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000018071's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000018071	yrdc	66	63.725	ENSG00000196449	YRDC	73	63.725	Homo_sapiens
ENSELUG00000018071	yrdc	80	79.339	ENSAPOG00000024293	yrdc	91	79.339	Acanthochromis_polyacanthus
ENSELUG00000018071	yrdc	59	65.027	ENSAMEG00000001173	YRDC	97	65.027	Ailuropoda_melanoleuca
ENSELUG00000018071	yrdc	89	70.111	ENSACIG00000017330	yrdc	100	70.111	Amphilophus_citrinellus
ENSELUG00000018071	yrdc	80	78.926	ENSAOCG00000021647	yrdc	91	78.926	Amphiprion_ocellaris
ENSELUG00000018071	yrdc	80	78.512	ENSAPEG00000006164	yrdc	91	78.512	Amphiprion_percula
ENSELUG00000018071	yrdc	87	72.830	ENSATEG00000010086	yrdc	98	72.830	Anabas_testudineus
ENSELUG00000018071	yrdc	63	62.371	ENSACAG00000017203	YRDC	94	61.809	Anolis_carolinensis
ENSELUG00000018071	yrdc	70	61.111	ENSANAG00000028788	-	90	61.111	Aotus_nancymaae
ENSELUG00000018071	yrdc	66	59.709	ENSANAG00000031052	-	75	59.709	Aotus_nancymaae
ENSELUG00000018071	yrdc	83	75.099	ENSACLG00000027775	yrdc	93	75.099	Astatotilapia_calliptera
ENSELUG00000018071	yrdc	84	71.595	ENSAMXG00000037791	yrdc	90	75.566	Astyanax_mexicanus
ENSELUG00000018071	yrdc	71	61.468	ENSBTAG00000006510	YRDC	78	61.468	Bos_taurus
ENSELUG00000018071	yrdc	66	38.308	WBGene00012997	Y48C3A.18	98	37.815	Caenorhabditis_elegans
ENSELUG00000018071	yrdc	66	63.235	ENSCJAG00000002078	YRDC	56	63.235	Callithrix_jacchus
ENSELUG00000018071	yrdc	66	63.235	ENSCAFG00000003253	YRDC	74	63.235	Canis_familiaris
ENSELUG00000018071	yrdc	66	64.706	ENSCAFG00020007843	YRDC	74	64.706	Canis_lupus_dingo
ENSELUG00000018071	yrdc	66	63.235	ENSCHIG00000007882	YRDC	74	63.235	Capra_hircus
ENSELUG00000018071	yrdc	55	64.706	ENSTSYG00000005555	YRDC	61	64.706	Carlito_syrichta
ENSELUG00000018071	yrdc	66	65.196	ENSCPOG00000036144	YRDC	73	65.196	Cavia_porcellus
ENSELUG00000018071	yrdc	66	63.235	ENSCCAG00000028891	YRDC	73	63.235	Cebus_capucinus
ENSELUG00000018071	yrdc	66	61.275	ENSCATG00000036928	YRDC	73	62.745	Cercocebus_atys
ENSELUG00000018071	yrdc	62	66.667	ENSCLAG00000015012	YRDC	73	64.216	Chinchilla_lanigera
ENSELUG00000018071	yrdc	66	61.275	ENSCSAG00000001116	YRDC	73	62.745	Chlorocebus_sabaeus
ENSELUG00000018071	yrdc	67	62.802	ENSCPBG00000018446	YRDC	88	62.802	Chrysemys_picta_bellii
ENSELUG00000018071	yrdc	66	49.765	ENSCING00000007564	-	98	49.765	Ciona_intestinalis
ENSELUG00000018071	yrdc	66	47.867	ENSCSAVG00000009982	-	98	47.867	Ciona_savignyi
ENSELUG00000018071	yrdc	66	62.255	ENSCANG00000031111	YRDC	73	63.725	Colobus_angolensis_palliatus
ENSELUG00000018071	yrdc	75	60.173	ENSCGRG00001014496	-	75	63.636	Cricetulus_griseus_chok1gshd
ENSELUG00000018071	yrdc	68	57.416	ENSCGRG00001000829	-	58	57.143	Cricetulus_griseus_chok1gshd
ENSELUG00000018071	yrdc	72	76.818	ENSCSEG00000019075	yrdc	81	76.818	Cynoglossus_semilaevis
ENSELUG00000018071	yrdc	78	72.152	ENSCVAG00000017355	yrdc	88	72.152	Cyprinodon_variegatus
ENSELUG00000018071	yrdc	79	71.429	ENSDARG00000041428	yrdc	98	71.429	Danio_rerio
ENSELUG00000018071	yrdc	66	63.235	ENSDNOG00000038789	-	73	63.830	Dasypus_novemcinctus
ENSELUG00000018071	yrdc	62	47.938	ENSDNOG00000036198	-	94	47.938	Dasypus_novemcinctus
ENSELUG00000018071	yrdc	61	65.608	ENSDORG00000008788	Yrdc	84	65.608	Dipodomys_ordii
ENSELUG00000018071	yrdc	63	50.256	FBgn0061361	CG33786	78	50.256	Drosophila_melanogaster
ENSELUG00000018071	yrdc	66	50.000	ENSETEG00000003442	YRDC	73	50.000	Echinops_telfairi
ENSELUG00000018071	yrdc	72	51.376	ENSEBUG00000014080	yrdc	92	51.376	Eptatretus_burgeri
ENSELUG00000018071	yrdc	70	62.500	ENSEASG00005012253	YRDC	73	64.390	Equus_asinus_asinus
ENSELUG00000018071	yrdc	73	61.504	ENSECAG00000022522	YRDC	79	61.504	Equus_caballus
ENSELUG00000018071	yrdc	66	62.745	ENSFCAG00000011018	YRDC	73	62.745	Felis_catus
ENSELUG00000018071	yrdc	61	67.196	ENSFALG00000000964	YRDC	88	66.667	Ficedula_albicollis
ENSELUG00000018071	yrdc	65	31.132	ENSFALG00000011333	-	55	31.132	Ficedula_albicollis
ENSELUG00000018071	yrdc	89	65.185	ENSFHEG00000001029	yrdc	93	67.234	Fundulus_heteroclitus
ENSELUG00000018071	yrdc	68	82.439	ENSGMOG00000015635	yrdc	99	82.439	Gadus_morhua
ENSELUG00000018071	yrdc	73	61.161	ENSGALG00000029001	YRDC	87	61.161	Gallus_gallus
ENSELUG00000018071	yrdc	67	31.193	ENSGALG00000025899	-	70	31.193	Gallus_gallus
ENSELUG00000018071	yrdc	89	65.683	ENSGAFG00000008396	yrdc	100	65.683	Gambusia_affinis
ENSELUG00000018071	yrdc	78	74.583	ENSGACG00000013878	yrdc	98	74.583	Gasterosteus_aculeatus
ENSELUG00000018071	yrdc	67	64.251	ENSGAGG00000014968	YRDC	90	64.251	Gopherus_agassizii
ENSELUG00000018071	yrdc	66	63.725	ENSGGOG00000007619	YRDC	73	63.725	Gorilla_gorilla
ENSELUG00000018071	yrdc	83	75.099	ENSHBUG00000009298	yrdc	93	75.099	Haplochromis_burtoni
ENSELUG00000018071	yrdc	66	64.216	ENSHGLG00000014075	YRDC	73	64.216	Heterocephalus_glaber_female
ENSELUG00000018071	yrdc	65	64.851	ENSHGLG00100002734	YRDC	73	64.851	Heterocephalus_glaber_male
ENSELUG00000018071	yrdc	83	70.079	ENSHCOG00000006598	yrdc	98	70.079	Hippocampus_comes
ENSELUG00000018071	yrdc	80	74.689	ENSIPUG00000014985	yrdc	98	74.689	Ictalurus_punctatus
ENSELUG00000018071	yrdc	66	65.196	ENSSTOG00000001643	YRDC	73	65.196	Ictidomys_tridecemlineatus
ENSELUG00000018071	yrdc	85	70.385	ENSKMAG00000013468	yrdc	95	70.385	Kryptolebias_marmoratus
ENSELUG00000018071	yrdc	88	73.408	ENSLBEG00000027501	yrdc	99	73.408	Labrus_bergylta
ENSELUG00000018071	yrdc	60	31.658	ENSLACG00000017624	si:ch211-153b23.3	59	31.658	Latimeria_chalumnae
ENSELUG00000018071	yrdc	78	60.246	ENSLACG00000010689	YRDC	94	65.196	Latimeria_chalumnae
ENSELUG00000018071	yrdc	78	68.619	ENSLOCG00000003321	yrdc	97	68.619	Lepisosteus_oculatus
ENSELUG00000018071	yrdc	66	63.725	ENSLAFG00000017556	YRDC	73	63.725	Loxodonta_africana
ENSELUG00000018071	yrdc	66	61.275	ENSMFAG00000003487	YRDC	96	62.745	Macaca_fascicularis
ENSELUG00000018071	yrdc	66	61.275	ENSMMUG00000005372	YRDC	54	62.745	Macaca_mulatta
ENSELUG00000018071	yrdc	66	61.275	ENSMNEG00000029348	YRDC	73	62.745	Macaca_nemestrina
ENSELUG00000018071	yrdc	78	77.731	ENSMAMG00000007315	yrdc	87	77.731	Mastacembelus_armatus
ENSELUG00000018071	yrdc	83	75.099	ENSMZEG00005006948	yrdc	93	75.099	Maylandia_zebra
ENSELUG00000018071	yrdc	65	31.604	ENSMGAG00000005489	-	53	31.604	Meleagris_gallopavo
ENSELUG00000018071	yrdc	65	66.000	ENSMGAG00000002833	YRDC	98	66.000	Meleagris_gallopavo
ENSELUG00000018071	yrdc	71	62.385	ENSMICG00000031688	YRDC	78	62.385	Microcebus_murinus
ENSELUG00000018071	yrdc	75	46.121	ENSMOCG00000000164	-	80	46.121	Microtus_ochrogaster
ENSELUG00000018071	yrdc	80	77.686	ENSMMOG00000002119	yrdc	89	77.686	Mola_mola
ENSELUG00000018071	yrdc	71	62.385	ENSMODG00000017750	YRDC	78	62.385	Monodelphis_domestica
ENSELUG00000018071	yrdc	78	80.000	ENSMALG00000012471	yrdc	87	80.000	Monopterus_albus
ENSELUG00000018071	yrdc	68	61.905	MGP_CAROLIEiJ_G0026453	Yrdc	98	71.845	Mus_caroli
ENSELUG00000018071	yrdc	73	60.619	ENSMUSG00000028889	Yrdc	100	71.429	Mus_musculus
ENSELUG00000018071	yrdc	76	60.086	MGP_PahariEiJ_G0028784	Yrdc	100	71.429	Mus_pahari
ENSELUG00000018071	yrdc	73	60.619	MGP_SPRETEiJ_G0027432	Yrdc	79	60.619	Mus_spretus
ENSELUG00000018071	yrdc	65	64.356	ENSMPUG00000014542	YRDC	81	64.356	Mustela_putorius_furo
ENSELUG00000018071	yrdc	62	61.979	ENSMLUG00000024310	-	94	61.979	Myotis_lucifugus
ENSELUG00000018071	yrdc	66	63.725	ENSMLUG00000000955	-	73	63.725	Myotis_lucifugus
ENSELUG00000018071	yrdc	66	54.412	ENSMLUG00000028796	-	73	54.412	Myotis_lucifugus
ENSELUG00000018071	yrdc	66	63.902	ENSNGAG00000019099	Yrdc	73	63.902	Nannospalax_galili
ENSELUG00000018071	yrdc	83	75.099	ENSNBRG00000009475	yrdc	94	75.099	Neolamprologus_brichardi
ENSELUG00000018071	yrdc	66	63.725	ENSNLEG00000011665	YRDC	73	63.725	Nomascus_leucogenys
ENSELUG00000018071	yrdc	66	64.878	ENSMEUG00000005068	YRDC	95	64.878	Notamacropus_eugenii
ENSELUG00000018071	yrdc	71	61.927	ENSODEG00000007401	YRDC	100	71.429	Octodon_degus
ENSELUG00000018071	yrdc	80	77.686	ENSONIG00000016213	yrdc	100	77.686	Oreochromis_niloticus
ENSELUG00000018071	yrdc	66	64.390	ENSOCUG00000005384	YRDC	70	64.390	Oryctolagus_cuniculus
ENSELUG00000018071	yrdc	80	72.131	ENSORLG00000014393	yrdc	91	72.131	Oryzias_latipes
ENSELUG00000018071	yrdc	80	72.727	ENSORLG00020019663	yrdc	91	72.727	Oryzias_latipes_hni
ENSELUG00000018071	yrdc	80	72.314	ENSORLG00015004625	yrdc	91	72.314	Oryzias_latipes_hsok
ENSELUG00000018071	yrdc	80	72.727	ENSOMEG00000018550	yrdc	91	72.727	Oryzias_melastigma
ENSELUG00000018071	yrdc	66	63.235	ENSOGAG00000030474	YRDC	74	63.235	Otolemur_garnettii
ENSELUG00000018071	yrdc	66	63.235	ENSOARG00000019873	YRDC	73	63.235	Ovis_aries
ENSELUG00000018071	yrdc	66	63.235	ENSPPRG00000007752	YRDC	73	63.235	Panthera_pardus
ENSELUG00000018071	yrdc	73	60.177	ENSPTRG00000000557	YRDC	73	63.725	Pan_troglodytes
ENSELUG00000018071	yrdc	66	61.275	ENSPANG00000006487	YRDC	55	62.745	Papio_anubis
ENSELUG00000018071	yrdc	79	67.755	ENSPKIG00000004574	yrdc	87	67.755	Paramormyrops_kingsleyae
ENSELUG00000018071	yrdc	84	53.285	ENSPSIG00000006483	YRDC	96	53.285	Pelodiscus_sinensis
ENSELUG00000018071	yrdc	87	70.189	ENSPMGG00000004184	yrdc	93	75.720	Periophthalmus_magnuspinnatus
ENSELUG00000018071	yrdc	55	65.698	ENSPEMG00000016985	Yrdc	76	65.143	Peromyscus_maniculatus_bairdii
ENSELUG00000018071	yrdc	57	59.887	ENSPMAG00000002905	yrdc	96	59.887	Petromyzon_marinus
ENSELUG00000018071	yrdc	71	61.468	ENSPCIG00000025731	YRDC	77	62.562	Phascolarctos_cinereus
ENSELUG00000018071	yrdc	89	65.683	ENSPFOG00000023097	yrdc	100	65.683	Poecilia_formosa
ENSELUG00000018071	yrdc	89	65.314	ENSPLAG00000020882	yrdc	100	65.314	Poecilia_latipinna
ENSELUG00000018071	yrdc	89	66.171	ENSPMEG00000013237	yrdc	100	66.171	Poecilia_mexicana
ENSELUG00000018071	yrdc	89	66.052	ENSPREG00000005285	yrdc	100	66.052	Poecilia_reticulata
ENSELUG00000018071	yrdc	70	61.751	ENSPPYG00000001523	-	88	61.751	Pongo_abelii
ENSELUG00000018071	yrdc	66	63.725	ENSPCAG00000016850	YRDC	73	63.725	Procavia_capensis
ENSELUG00000018071	yrdc	71	62.385	ENSPCOG00000013214	YRDC	77	62.385	Propithecus_coquereli
ENSELUG00000018071	yrdc	66	64.706	ENSPVAG00000010147	YRDC	73	64.706	Pteropus_vampyrus
ENSELUG00000018071	yrdc	83	74.704	ENSPNYG00000013956	yrdc	93	74.704	Pundamilia_nyererei
ENSELUG00000018071	yrdc	83	70.400	ENSPNAG00000015625	yrdc	99	70.400	Pygocentrus_nattereri
ENSELUG00000018071	yrdc	73	60.619	ENSRNOG00000025424	Yrdc	79	60.619	Rattus_norvegicus
ENSELUG00000018071	yrdc	71	59.091	ENSRBIG00000032289	YRDC	73	63.235	Rhinopithecus_bieti
ENSELUG00000018071	yrdc	65	62.376	ENSRROG00000039370	YRDC	69	63.861	Rhinopithecus_roxellana
ENSELUG00000018071	yrdc	70	60.648	ENSSBOG00000018937	YRDC	92	60.648	Saimiri_boliviensis_boliviensis
ENSELUG00000018071	yrdc	68	75.598	ENSSFOG00015006128	yrdc	90	75.598	Scleropages_formosus
ENSELUG00000018071	yrdc	80	76.763	ENSSMAG00000005195	yrdc	90	76.763	Scophthalmus_maximus
ENSELUG00000018071	yrdc	85	73.643	ENSSDUG00000009775	yrdc	95	73.643	Seriola_dumerili
ENSELUG00000018071	yrdc	53	31.548	ENSSDUG00000006631	-	78	31.646	Seriola_dumerili
ENSELUG00000018071	yrdc	85	73.643	ENSSLDG00000003196	yrdc	95	73.643	Seriola_lalandi_dorsalis
ENSELUG00000018071	yrdc	66	65.854	ENSSPUG00000003946	YRDC	79	65.854	Sphenodon_punctatus
ENSELUG00000018071	yrdc	86	73.563	ENSSPAG00000012559	yrdc	96	73.563	Stegastes_partitus
ENSELUG00000018071	yrdc	66	64.216	ENSSSCG00000040425	YRDC	75	62.857	Sus_scrofa
ENSELUG00000018071	yrdc	86	66.421	ENSTRUG00000005923	yrdc	99	67.279	Takifugu_rubripes
ENSELUG00000018071	yrdc	64	65.829	ENSUAMG00000006150	YRDC	98	65.829	Ursus_americanus
ENSELUG00000018071	yrdc	66	50.980	ENSVPAG00000006642	YRDC	87	50.980	Vicugna_pacos
ENSELUG00000018071	yrdc	70	62.326	ENSXETG00000014420	yrdc	90	62.326	Xenopus_tropicalis
ENSELUG00000018071	yrdc	80	70.248	ENSXCOG00000000829	yrdc	100	70.248	Xiphophorus_couchianus
ENSELUG00000018071	yrdc	89	65.314	ENSXMAG00000014606	yrdc	95	65.314	Xiphophorus_maculatus