EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000018195 (Gene tree)
Gene ID: 105006294
Gene Symbol: gpatch1
Alias: im:7135982|wu:fc11h11|wu:fj99h08
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 11739 bases
Position: chrLG17:849283-861021
Accession: 105006294
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000018767	DUF1604	PF07713.13	6.8e-37	1	1
ENSELUP00000018782	DUF1604	PF07713.13	3.9e-14	1	1
ENSELUP00000018782	G-patch	PF01585.23	9.6e-06	1	1
ENSELUP00000018767	G-patch	PF01585.23	9.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000028733	-	3297	XM_013138030	ENSELUP00000018767	955 (aa)	XP_012993484	UPI000661D69E
ENSELUT00000028746	-	3812	-	ENSELUP00000018782	945 (aa)	-	-

Gene Model

Click here to download ENSELUG00000018195's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000018195's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000018195	gpatch1	90	50.903	ENSG00000076650	GPATCH1	81	69.231	Homo_sapiens
ENSELUG00000018195	gpatch1	90	51.311	ENSAMEG00000015575	GPATCH1	99	49.022	Ailuropoda_melanoleuca
ENSELUG00000018195	gpatch1	80	78.531	ENSAOCG00000006668	gpatch1	75	78.531	Amphiprion_ocellaris
ENSELUG00000018195	gpatch1	80	61.286	ENSAPEG00000000026	gpatch1	99	54.425	Amphiprion_percula
ENSELUG00000018195	gpatch1	89	57.383	ENSATEG00000014494	gpatch1	99	54.747	Anabas_testudineus
ENSELUG00000018195	gpatch1	90	47.774	ENSAPLG00000007584	GPATCH1	96	47.987	Anas_platyrhynchos
ENSELUG00000018195	gpatch1	90	50.564	ENSANAG00000027002	GPATCH1	99	48.621	Aotus_nancymaae
ENSELUG00000018195	gpatch1	80	60.870	ENSACLG00000024740	gpatch1	80	60.247	Astatotilapia_calliptera
ENSELUG00000018195	gpatch1	80	64.365	ENSAMXG00000020177	gpatch1	86	64.165	Astyanax_mexicanus
ENSELUG00000018195	gpatch1	90	50.847	ENSCJAG00000000684	GPATCH1	99	49.898	Callithrix_jacchus
ENSELUG00000018195	gpatch1	90	50.674	ENSCAFG00000007457	GPATCH1	83	49.691	Canis_familiaris
ENSELUG00000018195	gpatch1	90	50.674	ENSCAFG00020019731	GPATCH1	91	51.302	Canis_lupus_dingo
ENSELUG00000018195	gpatch1	90	52.074	ENSCHIG00000019626	GPATCH1	99	48.813	Capra_hircus
ENSELUG00000018195	gpatch1	88	48.212	ENSCAPG00000008827	GPATCH1	99	47.374	Cavia_aperea
ENSELUG00000018195	gpatch1	80	52.532	ENSCPOG00000024477	GPATCH1	99	48.615	Cavia_porcellus
ENSELUG00000018195	gpatch1	90	49.550	ENSCCAG00000024676	GPATCH1	99	49.640	Cebus_capucinus
ENSELUG00000018195	gpatch1	90	51.973	ENSCATG00000043637	GPATCH1	81	70.192	Cercocebus_atys
ENSELUG00000018195	gpatch1	89	49.772	ENSCLAG00000003395	-	92	49.188	Chinchilla_lanigera
ENSELUG00000018195	gpatch1	90	50.000	ENSCSAG00000004743	GPATCH1	99	49.030	Chlorocebus_sabaeus
ENSELUG00000018195	gpatch1	78	58.986	ENSCHOG00000012865	GPATCH1	65	57.604	Choloepus_hoffmanni
ENSELUG00000018195	gpatch1	78	53.080	ENSCPBG00000000666	GPATCH1	93	52.865	Chrysemys_picta_bellii
ENSELUG00000018195	gpatch1	89	34.589	ENSCING00000012518	-	95	33.713	Ciona_intestinalis
ENSELUG00000018195	gpatch1	86	49.550	ENSCANG00000012540	GPATCH1	96	56.044	Colobus_angolensis_palliatus
ENSELUG00000018195	gpatch1	87	50.520	ENSCGRG00001016736	Gpatch1	99	47.945	Cricetulus_griseus_chok1gshd
ENSELUG00000018195	gpatch1	78	45.785	ENSCGRG00000005069	Gpatch1	78	45.337	Cricetulus_griseus_crigri
ENSELUG00000018195	gpatch1	89	56.236	ENSCSEG00000019456	-	77	82.828	Cynoglossus_semilaevis
ENSELUG00000018195	gpatch1	89	60.398	ENSDARG00000033418	gpatch1	100	56.565	Danio_rerio
ENSELUG00000018195	gpatch1	90	50.954	ENSDNOG00000005291	GPATCH1	94	49.718	Dasypus_novemcinctus
ENSELUG00000018195	gpatch1	90	48.347	ENSDORG00000012546	Gpatch1	94	48.509	Dipodomys_ordii
ENSELUG00000018195	gpatch1	90	48.127	ENSETEG00000003626	GPATCH1	91	47.777	Echinops_telfairi
ENSELUG00000018195	gpatch1	94	36.297	ENSEBUG00000011286	gpatch1	84	38.049	Eptatretus_burgeri
ENSELUG00000018195	gpatch1	90	51.425	ENSEASG00005021162	GPATCH1	92	50.915	Equus_asinus_asinus
ENSELUG00000018195	gpatch1	90	50.731	ENSECAG00000022743	GPATCH1	88	50.452	Equus_caballus
ENSELUG00000018195	gpatch1	65	52.970	ENSEEUG00000012925	GPATCH1	61	65.772	Erinaceus_europaeus
ENSELUG00000018195	gpatch1	90	50.056	ENSFCAG00000014917	GPATCH1	99	49.182	Felis_catus
ENSELUG00000018195	gpatch1	92	48.789	ENSFALG00000007821	GPATCH1	99	47.639	Ficedula_albicollis
ENSELUG00000018195	gpatch1	88	50.234	ENSFDAG00000003871	GPATCH1	91	49.366	Fukomys_damarensis
ENSELUG00000018195	gpatch1	92	49.291	ENSGALG00000004839	GPATCH1	94	48.835	Gallus_gallus
ENSELUG00000018195	gpatch1	80	59.398	ENSGACG00000017544	gpatch1	93	56.054	Gasterosteus_aculeatus
ENSELUG00000018195	gpatch1	90	49.494	ENSGAGG00000010067	GPATCH1	99	47.143	Gopherus_agassizii
ENSELUG00000018195	gpatch1	87	50.349	ENSGGOG00000010862	GPATCH1	99	48.739	Gorilla_gorilla
ENSELUG00000018195	gpatch1	80	60.621	ENSHBUG00000023462	gpatch1	99	55.345	Haplochromis_burtoni
ENSELUG00000018195	gpatch1	99	59.215	ENSIPUG00000014977	gpatch1	100	57.385	Ictalurus_punctatus
ENSELUG00000018195	gpatch1	90	48.709	ENSSTOG00000003720	GPATCH1	99	47.848	Ictidomys_tridecemlineatus
ENSELUG00000018195	gpatch1	90	51.239	ENSJJAG00000023765	Gpatch1	99	49.336	Jaculus_jaculus
ENSELUG00000018195	gpatch1	80	59.057	ENSKMAG00000017950	gpatch1	99	54.995	Kryptolebias_marmoratus
ENSELUG00000018195	gpatch1	80	61.739	ENSLBEG00000026527	gpatch1	88	58.526	Labrus_bergylta
ENSELUG00000018195	gpatch1	89	51.018	ENSLACG00000008130	GPATCH1	99	48.371	Latimeria_chalumnae
ENSELUG00000018195	gpatch1	99	57.114	ENSLOCG00000001800	gpatch1	99	55.036	Lepisosteus_oculatus
ENSELUG00000018195	gpatch1	90	50.561	ENSLAFG00000013589	GPATCH1	99	49.280	Loxodonta_africana
ENSELUG00000018195	gpatch1	90	51.016	ENSMFAG00000034418	GPATCH1	81	70.192	Macaca_fascicularis
ENSELUG00000018195	gpatch1	90	50.958	ENSMMUG00000011790	GPATCH1	81	71.154	Macaca_mulatta
ENSELUG00000018195	gpatch1	90	50.790	ENSMNEG00000045084	GPATCH1	81	68.269	Macaca_nemestrina
ENSELUG00000018195	gpatch1	90	44.758	ENSMLEG00000043840	GPATCH1	99	43.616	Mandrillus_leucophaeus
ENSELUG00000018195	gpatch1	80	60.621	ENSMZEG00005001926	gpatch1	80	59.506	Maylandia_zebra
ENSELUG00000018195	gpatch1	90	49.490	ENSMGAG00000005775	GPATCH1	90	48.529	Meleagris_gallopavo
ENSELUG00000018195	gpatch1	90	46.007	ENSMICG00000004829	GPATCH1	93	46.007	Microcebus_murinus
ENSELUG00000018195	gpatch1	90	50.332	ENSMOCG00000000174	Gpatch1	91	49.889	Microtus_ochrogaster
ENSELUG00000018195	gpatch1	83	56.109	ENSMMOG00000002140	gpatch1	87	56.151	Mola_mola
ENSELUG00000018195	gpatch1	91	49.212	ENSMODG00000012226	GPATCH1	99	47.795	Monodelphis_domestica
ENSELUG00000018195	gpatch1	99	55.061	ENSMALG00000014386	gpatch1	99	54.125	Monopterus_albus
ENSELUG00000018195	gpatch1	92	49.615	ENSMUSG00000063808	Gpatch1	98	71.875	Mus_musculus
ENSELUG00000018195	gpatch1	92	49.890	MGP_PahariEiJ_G0012816	Gpatch1	98	72.917	Mus_pahari
ENSELUG00000018195	gpatch1	92	49.558	MGP_SPRETEiJ_G0030681	Gpatch1	98	72.917	Mus_spretus
ENSELUG00000018195	gpatch1	90	51.078	ENSMPUG00000007658	GPATCH1	99	48.410	Mustela_putorius_furo
ENSELUG00000018195	gpatch1	90	50.168	ENSMLUG00000012161	GPATCH1	99	48.099	Myotis_lucifugus
ENSELUG00000018195	gpatch1	90	50.282	ENSNGAG00000012455	Gpatch1	99	48.497	Nannospalax_galili
ENSELUG00000018195	gpatch1	90	51.403	ENSNLEG00000007659	GPATCH1	81	69.231	Nomascus_leucogenys
ENSELUG00000018195	gpatch1	74	47.686	ENSMEUG00000015174	GPATCH1	73	47.125	Notamacropus_eugenii
ENSELUG00000018195	gpatch1	90	50.339	ENSODEG00000007103	GPATCH1	99	47.835	Octodon_degus
ENSELUG00000018195	gpatch1	80	60.821	ENSONIG00000003302	gpatch1	99	56.212	Oreochromis_niloticus
ENSELUG00000018195	gpatch1	99	48.061	ENSOANG00000012732	GPATCH1	99	46.524	Ornithorhynchus_anatinus
ENSELUG00000018195	gpatch1	90	52.213	ENSOCUG00000015905	GPATCH1	99	50.000	Oryctolagus_cuniculus
ENSELUG00000018195	gpatch1	89	59.132	ENSORLG00000018706	gpatch1	99	55.488	Oryzias_latipes
ENSELUG00000018195	gpatch1	89	58.277	ENSOMEG00000022688	gpatch1	99	55.769	Oryzias_melastigma
ENSELUG00000018195	gpatch1	82	52.534	ENSOGAG00000004016	GPATCH1	96	53.082	Otolemur_garnettii
ENSELUG00000018195	gpatch1	90	50.448	ENSOARG00000004365	GPATCH1	99	48.444	Ovis_aries
ENSELUG00000018195	gpatch1	90	50.677	ENSPPAG00000020990	GPATCH1	81	68.571	Pan_paniscus
ENSELUG00000018195	gpatch1	90	50.000	ENSPPRG00000017245	GPATCH1	99	48.978	Panthera_pardus
ENSELUG00000018195	gpatch1	90	50.668	ENSPTIG00000019649	GPATCH1	99	49.693	Panthera_tigris_altaica
ENSELUG00000018195	gpatch1	90	50.451	ENSPTRG00000010803	GPATCH1	81	69.231	Pan_troglodytes
ENSELUG00000018195	gpatch1	90	50.958	ENSPANG00000012374	GPATCH1	81	70.192	Papio_anubis
ENSELUG00000018195	gpatch1	80	62.940	ENSPKIG00000020745	gpatch1	99	55.643	Paramormyrops_kingsleyae
ENSELUG00000018195	gpatch1	91	49.833	ENSPSIG00000013433	GPATCH1	86	56.923	Pelodiscus_sinensis
ENSELUG00000018195	gpatch1	90	51.400	ENSPEMG00000000636	Gpatch1	99	48.414	Peromyscus_maniculatus_bairdii
ENSELUG00000018195	gpatch1	90	48.869	ENSPCIG00000021003	GPATCH1	95	48.148	Phascolarctos_cinereus
ENSELUG00000018195	gpatch1	89	50.346	ENSPREG00000008264	gpatch1	97	50.404	Poecilia_reticulata
ENSELUG00000018195	gpatch1	90	50.000	ENSPPYG00000009824	GPATCH1	99	47.449	Pongo_abelii
ENSELUG00000018195	gpatch1	82	49.003	ENSPCAG00000005931	GPATCH1	85	47.922	Procavia_capensis
ENSELUG00000018195	gpatch1	93	48.144	ENSPCOG00000009674	GPATCH1	96	48.471	Propithecus_coquereli
ENSELUG00000018195	gpatch1	79	52.474	ENSPVAG00000017767	GPATCH1	76	52.774	Pteropus_vampyrus
ENSELUG00000018195	gpatch1	80	61.886	ENSPNYG00000018189	gpatch1	89	60.572	Pundamilia_nyererei
ENSELUG00000018195	gpatch1	99	57.579	ENSPNAG00000013187	gpatch1	100	57.696	Pygocentrus_nattereri
ENSELUG00000018195	gpatch1	92	50.274	ENSRNOG00000011584	Gpatch1	99	48.163	Rattus_norvegicus
ENSELUG00000018195	gpatch1	90	46.163	ENSRBIG00000034723	GPATCH1	99	45.324	Rhinopithecus_bieti
ENSELUG00000018195	gpatch1	90	51.016	ENSRROG00000024428	GPATCH1	81	69.231	Rhinopithecus_roxellana
ENSELUG00000018195	gpatch1	90	50.564	ENSSBOG00000034650	GPATCH1	99	48.265	Saimiri_boliviensis_boliviensis
ENSELUG00000018195	gpatch1	90	49.432	ENSSHAG00000016016	GPATCH1	99	46.830	Sarcophilus_harrisii
ENSELUG00000018195	gpatch1	80	66.667	ENSSFOG00015011535	gpatch1	100	59.021	Scleropages_formosus
ENSELUG00000018195	gpatch1	99	51.500	ENSSMAG00000002883	gpatch1	99	51.798	Scophthalmus_maximus
ENSELUG00000018195	gpatch1	80	61.958	ENSSDUG00000007444	gpatch1	99	56.008	Seriola_dumerili
ENSELUG00000018195	gpatch1	80	62.516	ENSSLDG00000002856	gpatch1	90	61.434	Seriola_lalandi_dorsalis
ENSELUG00000018195	gpatch1	72	57.081	ENSSARG00000004108	GPATCH1	71	56.069	Sorex_araneus
ENSELUG00000018195	gpatch1	90	49.667	ENSSSCG00000002865	GPATCH1	93	49.549	Sus_scrofa
ENSELUG00000018195	gpatch1	92	49.889	ENSTGUG00000009401	GPATCH1	91	50.000	Taeniopygia_guttata
ENSELUG00000018195	gpatch1	80	58.259	ENSTRUG00000005785	-	100	52.303	Takifugu_rubripes
ENSELUG00000018195	gpatch1	80	58.259	ENSTRUG00000025081	gpatch1	100	52.303	Takifugu_rubripes
ENSELUG00000018195	gpatch1	80	57.538	ENSTNIG00000002554	gpatch1	98	56.931	Tetraodon_nigroviridis
ENSELUG00000018195	gpatch1	64	49.432	ENSTBEG00000007750	-	79	49.123	Tupaia_belangeri
ENSELUG00000018195	gpatch1	84	60.357	ENSTTRG00000012221	GPATCH1	93	59.286	Tursiops_truncatus
ENSELUG00000018195	gpatch1	91	51.066	ENSUMAG00000014645	GPATCH1	77	72.917	Ursus_maritimus
ENSELUG00000018195	gpatch1	79	67.052	ENSVPAG00000010313	GPATCH1	85	66.851	Vicugna_pacos
ENSELUG00000018195	gpatch1	90	50.731	ENSVVUG00000016572	GPATCH1	91	51.525	Vulpes_vulpes
ENSELUG00000018195	gpatch1	92	44.212	ENSXETG00000018276	gpatch1	93	47.036	Xenopus_tropicalis