EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000018246 (Gene tree)
Gene ID: 105017024
Gene Symbol: thumpd3
Alias: cb255|sb:cb255|zgc:163086
Full Name: THUMP domain containing 3
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 15899 bases
Position: chrLG17:16548496-16564394
Accession: 105017024
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000038396	THUMP	PF02926.17	7.3e-11	1	1
ENSELUP00000038396	UPF0020	PF01170.18	3.4e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000028811	-	4002	XM_010881313	ENSELUP00000038396	560 (aa)	XP_010879615	UPI000576B8D6

Gene Model

Click here to download ENSELUG00000018246's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000018246's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000018246	thumpd3	69	67.014	ENSG00000134077	THUMPD3	80	67.014	Homo_sapiens
ENSELUG00000018246	thumpd3	71	85.172	ENSAPOG00000015836	thumpd3	85	85.172	Acanthochromis_polyacanthus
ENSELUG00000018246	thumpd3	71	69.792	ENSAMEG00000011321	THUMPD3	86	69.792	Ailuropoda_melanoleuca
ENSELUG00000018246	thumpd3	68	88.448	ENSACIG00000020096	thumpd3	79	88.448	Amphilophus_citrinellus
ENSELUG00000018246	thumpd3	68	86.643	ENSAOCG00000004399	thumpd3	82	82.712	Amphiprion_ocellaris
ENSELUG00000018246	thumpd3	92	66.151	ENSAPEG00000016740	thumpd3	82	87.004	Amphiprion_percula
ENSELUG00000018246	thumpd3	93	66.409	ENSATEG00000005345	thumpd3	88	83.446	Anabas_testudineus
ENSELUG00000018246	thumpd3	55	74.621	ENSAPLG00000003598	THUMPD3	80	74.621	Anas_platyrhynchos
ENSELUG00000018246	thumpd3	89	55.361	ENSACAG00000014974	THUMPD3	81	68.750	Anolis_carolinensis
ENSELUG00000018246	thumpd3	69	66.667	ENSANAG00000002365	THUMPD3	82	66.667	Aotus_nancymaae
ENSELUG00000018246	thumpd3	69	88.087	ENSACLG00000023333	thumpd3	79	88.087	Astatotilapia_calliptera
ENSELUG00000018246	thumpd3	63	64.356	ENSACLG00000013504	-	72	64.356	Astatotilapia_calliptera
ENSELUG00000018246	thumpd3	78	74.695	ENSAMXG00000015683	thumpd3	93	74.924	Astyanax_mexicanus
ENSELUG00000018246	thumpd3	72	70.486	ENSBTAG00000003112	THUMPD3	87	70.486	Bos_taurus
ENSELUG00000018246	thumpd3	72	39.550	WBGene00010846	M04B2.2	93	42.125	Caenorhabditis_elegans
ENSELUG00000018246	thumpd3	69	66.667	ENSCJAG00000015949	THUMPD3	82	66.667	Callithrix_jacchus
ENSELUG00000018246	thumpd3	69	69.444	ENSCAFG00000005499	THUMPD3	78	69.444	Canis_familiaris
ENSELUG00000018246	thumpd3	56	70.196	ENSCAFG00000008060	-	78	70.196	Canis_familiaris
ENSELUG00000018246	thumpd3	69	69.444	ENSCAFG00020008895	-	78	69.444	Canis_lupus_dingo
ENSELUG00000018246	thumpd3	61	69.097	ENSCAFG00020025887	-	81	69.097	Canis_lupus_dingo
ENSELUG00000018246	thumpd3	51	70.486	ENSCHIG00000024037	THUMPD3	57	70.486	Capra_hircus
ENSELUG00000018246	thumpd3	72	65.972	ENSTSYG00000000159	THUMPD3	84	65.972	Carlito_syrichta
ENSELUG00000018246	thumpd3	50	50.000	ENSCAPG00000017486	THUMPD3	55	49.823	Cavia_aperea
ENSELUG00000018246	thumpd3	69	71.127	ENSCPOG00000033287	THUMPD3	78	71.127	Cavia_porcellus
ENSELUG00000018246	thumpd3	69	66.667	ENSCCAG00000027067	-	82	66.667	Cebus_capucinus
ENSELUG00000018246	thumpd3	65	62.745	ENSCCAG00000021429	-	79	62.249	Cebus_capucinus
ENSELUG00000018246	thumpd3	72	67.014	ENSCATG00000040999	THUMPD3	82	67.014	Cercocebus_atys
ENSELUG00000018246	thumpd3	73	68.707	ENSCLAG00000000690	THUMPD3	82	68.707	Chinchilla_lanigera
ENSELUG00000018246	thumpd3	72	67.014	ENSCSAG00000010753	THUMPD3	82	67.014	Chlorocebus_sabaeus
ENSELUG00000018246	thumpd3	55	68.041	ENSCHOG00000012851	THUMPD3	69	68.041	Choloepus_hoffmanni
ENSELUG00000018246	thumpd3	90	57.791	ENSCPBG00000014771	THUMPD3	82	72.894	Chrysemys_picta_bellii
ENSELUG00000018246	thumpd3	67	46.520	ENSCSAVG00000008668	-	88	46.520	Ciona_savignyi
ENSELUG00000018246	thumpd3	72	66.667	ENSCANG00000031901	THUMPD3	82	66.667	Colobus_angolensis_palliatus
ENSELUG00000018246	thumpd3	93	54.215	ENSCGRG00001024117	Thumpd3	81	70.036	Cricetulus_griseus_chok1gshd
ENSELUG00000018246	thumpd3	93	54.215	ENSCGRG00000018116	Thumpd3	81	70.036	Cricetulus_griseus_crigri
ENSELUG00000018246	thumpd3	70	83.813	ENSCSEG00000002546	thumpd3	81	83.813	Cynoglossus_semilaevis
ENSELUG00000018246	thumpd3	81	85.714	ENSCVAG00000001019	thumpd3	84	83.893	Cyprinodon_variegatus
ENSELUG00000018246	thumpd3	93	60.612	ENSDARG00000059634	thumpd3	82	80.515	Danio_rerio
ENSELUG00000018246	thumpd3	96	54.412	ENSDNOG00000047668	THUMPD3	84	67.333	Dasypus_novemcinctus
ENSELUG00000018246	thumpd3	94	55.198	ENSDORG00000003257	Thumpd3	82	68.990	Dipodomys_ordii
ENSELUG00000018246	thumpd3	63	62.835	ENSEBUG00000004221	thumpd3	79	62.835	Eptatretus_burgeri
ENSELUG00000018246	thumpd3	72	67.014	ENSEASG00005013327	THUMPD3	85	67.014	Equus_asinus_asinus
ENSELUG00000018246	thumpd3	72	70.486	ENSECAG00000002016	THUMPD3	85	70.486	Equus_caballus
ENSELUG00000018246	thumpd3	69	62.500	ENSEEUG00000014696	THUMPD3	79	62.500	Erinaceus_europaeus
ENSELUG00000018246	thumpd3	70	71.739	ENSFCAG00000006171	THUMPD3	79	71.739	Felis_catus
ENSELUG00000018246	thumpd3	84	54.316	ENSFALG00000013631	THUMPD3	74	72.034	Ficedula_albicollis
ENSELUG00000018246	thumpd3	73	68.367	ENSFDAG00000014825	THUMPD3	82	68.367	Fukomys_damarensis
ENSELUG00000018246	thumpd3	77	88.087	ENSFHEG00000006006	thumpd3	90	85.714	Fundulus_heteroclitus
ENSELUG00000018246	thumpd3	67	79.273	ENSGMOG00000007923	thumpd3	81	79.273	Gadus_morhua
ENSELUG00000018246	thumpd3	66	74.621	ENSGALG00000044813	THUMPD3	75	74.621	Gallus_gallus
ENSELUG00000018246	thumpd3	87	79.114	ENSGAFG00000021645	thumpd3	89	83.959	Gambusia_affinis
ENSELUG00000018246	thumpd3	93	64.672	ENSGACG00000000930	thumpd3	83	83.929	Gasterosteus_aculeatus
ENSELUG00000018246	thumpd3	67	72.894	ENSGAGG00000022750	THUMPD3	78	72.894	Gopherus_agassizii
ENSELUG00000018246	thumpd3	68	67.972	ENSGGOG00000000604	THUMPD3	80	66.667	Gorilla_gorilla
ENSELUG00000018246	thumpd3	69	88.087	ENSHBUG00000013405	thumpd3	79	88.087	Haplochromis_burtoni
ENSELUG00000018246	thumpd3	73	68.707	ENSHGLG00000016200	THUMPD3	82	68.707	Heterocephalus_glaber_female
ENSELUG00000018246	thumpd3	73	68.707	ENSHGLG00100017321	-	82	68.707	Heterocephalus_glaber_male
ENSELUG00000018246	thumpd3	69	60.148	ENSHGLG00100000505	-	79	60.148	Heterocephalus_glaber_male
ENSELUG00000018246	thumpd3	71	84.286	ENSHCOG00000004871	thumpd3	84	84.286	Hippocampus_comes
ENSELUG00000018246	thumpd3	77	83.214	ENSIPUG00000019415	THUMPD3	83	83.214	Ictalurus_punctatus
ENSELUG00000018246	thumpd3	95	53.989	ENSSTOG00000003973	THUMPD3	85	68.027	Ictidomys_tridecemlineatus
ENSELUG00000018246	thumpd3	71	61.739	ENSJJAG00000017751	Thumpd3	80	61.268	Jaculus_jaculus
ENSELUG00000018246	thumpd3	82	79.743	ENSKMAG00000021025	thumpd3	85	80.000	Kryptolebias_marmoratus
ENSELUG00000018246	thumpd3	68	88.043	ENSLBEG00000012252	thumpd3	89	88.043	Labrus_bergylta
ENSELUG00000018246	thumpd3	92	54.845	ENSLACG00000018604	THUMPD3	82	70.609	Latimeria_chalumnae
ENSELUG00000018246	thumpd3	92	61.583	ENSLOCG00000009800	thumpd3	78	80.000	Lepisosteus_oculatus
ENSELUG00000018246	thumpd3	72	70.175	ENSLAFG00000005103	THUMPD3	85	70.175	Loxodonta_africana
ENSELUG00000018246	thumpd3	71	68.459	ENSMFAG00000044884	THUMPD3	81	68.459	Macaca_fascicularis
ENSELUG00000018246	thumpd3	71	68.459	ENSMMUG00000017307	THUMPD3	81	68.459	Macaca_mulatta
ENSELUG00000018246	thumpd3	71	68.459	ENSMNEG00000030529	THUMPD3	81	68.459	Macaca_nemestrina
ENSELUG00000018246	thumpd3	72	67.014	ENSMLEG00000032943	THUMPD3	82	67.014	Mandrillus_leucophaeus
ENSELUG00000018246	thumpd3	70	84.722	ENSMAMG00000023934	thumpd3	87	84.722	Mastacembelus_armatus
ENSELUG00000018246	thumpd3	69	88.087	ENSMZEG00005010623	thumpd3	79	88.087	Maylandia_zebra
ENSELUG00000018246	thumpd3	57	73.106	ENSMGAG00000010182	THUMPD3	81	73.106	Meleagris_gallopavo
ENSELUG00000018246	thumpd3	95	52.015	ENSMAUG00000012250	Thumpd3	89	68.990	Mesocricetus_auratus
ENSELUG00000018246	thumpd3	92	52.247	ENSMICG00000010095	THUMPD3	84	65.398	Microcebus_murinus
ENSELUG00000018246	thumpd3	73	68.027	ENSMOCG00000020148	Thumpd3	84	69.097	Microtus_ochrogaster
ENSELUG00000018246	thumpd3	79	84.838	ENSMMOG00000021791	thumpd3	89	84.838	Mola_mola
ENSELUG00000018246	thumpd3	68	70.758	ENSMODG00000004715	-	76	70.758	Monodelphis_domestica
ENSELUG00000018246	thumpd3	95	63.569	ENSMALG00000017316	thumpd3	87	86.842	Monopterus_albus
ENSELUG00000018246	thumpd3	73	68.662	ENSMUSG00000030264	Thumpd3	84	68.662	Mus_musculus
ENSELUG00000018246	thumpd3	69	68.662	MGP_PahariEiJ_G0022465	Thumpd3	83	68.662	Mus_pahari
ENSELUG00000018246	thumpd3	73	68.662	MGP_SPRETEiJ_G0029742	Thumpd3	85	68.662	Mus_spretus
ENSELUG00000018246	thumpd3	71	70.819	ENSMPUG00000017066	-	82	70.819	Mustela_putorius_furo
ENSELUG00000018246	thumpd3	71	62.931	ENSMPUG00000005219	-	81	60.932	Mustela_putorius_furo
ENSELUG00000018246	thumpd3	68	69.286	ENSMLUG00000008538	THUMPD3	79	69.286	Myotis_lucifugus
ENSELUG00000018246	thumpd3	69	69.014	ENSNGAG00000021014	-	78	69.014	Nannospalax_galili
ENSELUG00000018246	thumpd3	67	58.696	ENSNGAG00000001549	-	80	58.696	Nannospalax_galili
ENSELUG00000018246	thumpd3	73	88.087	ENSNBRG00000004886	thumpd3	85	88.087	Neolamprologus_brichardi
ENSELUG00000018246	thumpd3	72	67.014	ENSNLEG00000003863	THUMPD3	82	67.014	Nomascus_leucogenys
ENSELUG00000018246	thumpd3	61	68.990	ENSMEUG00000009819	THUMPD3	82	68.990	Notamacropus_eugenii
ENSELUG00000018246	thumpd3	61	69.550	ENSOPRG00000002020	THUMPD3	83	69.550	Ochotona_princeps
ENSELUG00000018246	thumpd3	50	70.306	ENSODEG00000018242	THUMPD3	83	70.306	Octodon_degus
ENSELUG00000018246	thumpd3	68	88.087	ENSONIG00000018977	thumpd3	79	88.087	Oreochromis_niloticus
ENSELUG00000018246	thumpd3	66	62.541	ENSOANG00000014481	THUMPD3	86	62.418	Ornithorhynchus_anatinus
ENSELUG00000018246	thumpd3	73	69.728	ENSOCUG00000010921	THUMPD3	82	72.157	Oryctolagus_cuniculus
ENSELUG00000018246	thumpd3	91	73.043	ENSORLG00000000676	thumpd3	90	76.730	Oryzias_latipes
ENSELUG00000018246	thumpd3	86	77.673	ENSORLG00020007509	thumpd3	89	77.673	Oryzias_latipes_hni
ENSELUG00000018246	thumpd3	91	73.623	ENSORLG00015003615	thumpd3	90	77.358	Oryzias_latipes_hsok
ENSELUG00000018246	thumpd3	67	85.766	ENSOMEG00000014115	thumpd3	92	81.481	Oryzias_melastigma
ENSELUG00000018246	thumpd3	58	68.000	ENSOGAG00000017111	THUMPD3	89	66.197	Otolemur_garnettii
ENSELUG00000018246	thumpd3	71	71.127	ENSOARG00000007139	THUMPD3	84	71.127	Ovis_aries
ENSELUG00000018246	thumpd3	69	67.014	ENSPPAG00000025852	THUMPD3	79	67.014	Pan_paniscus
ENSELUG00000018246	thumpd3	71	71.429	ENSPPRG00000008071	THUMPD3	78	71.429	Panthera_pardus
ENSELUG00000018246	thumpd3	71	71.429	ENSPTIG00000017923	THUMPD3	79	71.429	Panthera_tigris_altaica
ENSELUG00000018246	thumpd3	69	66.667	ENSPTRG00000014585	THUMPD3	80	66.667	Pan_troglodytes
ENSELUG00000018246	thumpd3	72	66.667	ENSPANG00000016253	THUMPD3	82	66.667	Papio_anubis
ENSELUG00000018246	thumpd3	80	72.642	ENSPKIG00000014009	thumpd3	88	75.585	Paramormyrops_kingsleyae
ENSELUG00000018246	thumpd3	94	54.511	ENSPSIG00000007370	THUMPD3	83	68.403	Pelodiscus_sinensis
ENSELUG00000018246	thumpd3	91	66.275	ENSPMGG00000017563	thumpd3	88	80.719	Periophthalmus_magnuspinnatus
ENSELUG00000018246	thumpd3	70	70.036	ENSPEMG00000022411	Thumpd3	83	70.036	Peromyscus_maniculatus_bairdii
ENSELUG00000018246	thumpd3	70	61.321	ENSPMAG00000001291	thumpd3	91	60.806	Petromyzon_marinus
ENSELUG00000018246	thumpd3	74	69.123	ENSPCIG00000002049	THUMPD3	82	69.123	Phascolarctos_cinereus
ENSELUG00000018246	thumpd3	90	79.430	ENSPFOG00000002318	thumpd3	91	84.669	Poecilia_formosa
ENSELUG00000018246	thumpd3	90	79.430	ENSPLAG00000014804	thumpd3	91	84.669	Poecilia_latipinna
ENSELUG00000018246	thumpd3	90	79.430	ENSPMEG00000000582	thumpd3	91	84.669	Poecilia_mexicana
ENSELUG00000018246	thumpd3	83	78.750	ENSPREG00000009176	thumpd3	92	84.669	Poecilia_reticulata
ENSELUG00000018246	thumpd3	90	37.624	ENSPPYG00000017616	-	72	51.838	Pongo_abelii
ENSELUG00000018246	thumpd3	72	66.667	ENSPPYG00000029461	THUMPD3	82	66.667	Pongo_abelii
ENSELUG00000018246	thumpd3	83	51.059	ENSPCAG00000015398	THUMPD3	87	68.750	Procavia_capensis
ENSELUG00000018246	thumpd3	66	64.629	ENSPCOG00000023618	-	85	64.629	Propithecus_coquereli
ENSELUG00000018246	thumpd3	73	61.864	ENSPCOG00000018095	-	86	56.552	Propithecus_coquereli
ENSELUG00000018246	thumpd3	72	69.338	ENSPVAG00000008721	THUMPD3	82	69.338	Pteropus_vampyrus
ENSELUG00000018246	thumpd3	69	88.087	ENSPNYG00000006918	thumpd3	79	88.087	Pundamilia_nyererei
ENSELUG00000018246	thumpd3	80	80.277	ENSPNAG00000014936	thumpd3	89	77.741	Pygocentrus_nattereri
ENSELUG00000018246	thumpd3	71	69.258	ENSRNOG00000006941	Thumpd3	83	69.258	Rattus_norvegicus
ENSELUG00000018246	thumpd3	72	67.128	ENSRBIG00000035954	THUMPD3	83	67.128	Rhinopithecus_bieti
ENSELUG00000018246	thumpd3	72	66.782	ENSRROG00000035734	THUMPD3	83	66.782	Rhinopithecus_roxellana
ENSELUG00000018246	thumpd3	72	66.899	ENSSBOG00000023567	THUMPD3	84	69.004	Saimiri_boliviensis_boliviensis
ENSELUG00000018246	thumpd3	69	69.123	ENSSHAG00000014467	THUMPD3	77	69.123	Sarcophilus_harrisii
ENSELUG00000018246	thumpd3	81	75.570	ENSSFOG00015019210	thumpd3	84	75.570	Scleropages_formosus
ENSELUG00000018246	thumpd3	68	88.043	ENSSMAG00000000609	thumpd3	94	76.276	Scophthalmus_maximus
ENSELUG00000018246	thumpd3	97	64.706	ENSSDUG00000012179	thumpd3	93	84.247	Seriola_dumerili
ENSELUG00000018246	thumpd3	97	64.890	ENSSLDG00000022028	thumpd3	90	88.129	Seriola_lalandi_dorsalis
ENSELUG00000018246	thumpd3	58	87.234	ENSSARG00000002239	THUMPD3	68	72.881	Sorex_araneus
ENSELUG00000018246	thumpd3	89	55.166	ENSSPUG00000017461	THUMPD3	76	68.551	Sphenodon_punctatus
ENSELUG00000018246	thumpd3	69	88.087	ENSSPAG00000008345	thumpd3	79	88.087	Stegastes_partitus
ENSELUG00000018246	thumpd3	71	71.479	ENSSSCG00000011542	THUMPD3	81	71.479	Sus_scrofa
ENSELUG00000018246	thumpd3	65	71.863	ENSTGUG00000010440	THUMPD3	86	72.243	Taeniopygia_guttata
ENSELUG00000018246	thumpd3	84	74.780	ENSTRUG00000004420	thumpd3	95	78.549	Takifugu_rubripes
ENSELUG00000018246	thumpd3	68	86.594	ENSTNIG00000014627	thumpd3	90	86.594	Tetraodon_nigroviridis
ENSELUG00000018246	thumpd3	72	68.293	ENSTBEG00000003450	THUMPD3	83	68.293	Tupaia_belangeri
ENSELUG00000018246	thumpd3	70	72.101	ENSTTRG00000009694	THUMPD3	82	70.139	Tursiops_truncatus
ENSELUG00000018246	thumpd3	72	69.792	ENSUAMG00000009412	THUMPD3	87	69.792	Ursus_americanus
ENSELUG00000018246	thumpd3	72	69.792	ENSUMAG00000019241	THUMPD3	86	69.792	Ursus_maritimus
ENSELUG00000018246	thumpd3	58	71.845	ENSVPAG00000002855	THUMPD3	80	71.845	Vicugna_pacos
ENSELUG00000018246	thumpd3	69	69.792	ENSVVUG00000025278	THUMPD3	78	69.792	Vulpes_vulpes
ENSELUG00000018246	thumpd3	98	52.717	ENSXETG00000001447	thumpd3	55	70.000	Xenopus_tropicalis
ENSELUG00000018246	thumpd3	91	79.114	ENSXCOG00000000159	thumpd3	89	84.669	Xiphophorus_couchianus
ENSELUG00000018246	thumpd3	91	79.114	ENSXMAG00000001423	thumpd3	88	84.669	Xiphophorus_maculatus