EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000018385 (Gene tree)
Gene ID: 105017077
Gene Symbol: PABPN1L
Alias: ePABP2
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 5379 bases
Position: chrLG02:8912281-8917659
Accession: 105017077
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000018988	RRM_1	PF00076.22	2.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000040812	PABPN1L-201	4010	XM_010881415	ENSELUP00000018988	256 (aa)	XP_010879717	UPI0005762617

Gene Model

Click here to download ENSELUG00000018385's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000018385's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000018385	PABPN1L	67	65.714	ENSELUG00000022654	pabpn1	62	69.128

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000018385	PABPN1L	63	56.805	ENSG00000205022	PABPN1L	64	54.237	Homo_sapiens
ENSELUG00000018385	PABPN1L	90	68.333	ENSAPOG00000000685	PABPN1L	81	65.600	Acanthochromis_polyacanthus
ENSELUG00000018385	PABPN1L	90	67.660	ENSACIG00000021400	PABPN1L	97	66.383	Amphilophus_citrinellus
ENSELUG00000018385	PABPN1L	96	65.748	ENSAOCG00000019844	PABPN1L	96	68.110	Amphiprion_ocellaris
ENSELUG00000018385	PABPN1L	96	65.748	ENSAPEG00000019534	PABPN1L	96	68.110	Amphiprion_percula
ENSELUG00000018385	PABPN1L	90	68.487	ENSATEG00000011646	PABPN1L	95	68.067	Anabas_testudineus
ENSELUG00000018385	PABPN1L	66	63.314	ENSACAG00000013250	PABPN1L	74	64.539	Anolis_carolinensis
ENSELUG00000018385	PABPN1L	72	53.368	ENSANAG00000038178	PABPN1L	64	53.143	Aotus_nancymaae
ENSELUG00000018385	PABPN1L	99	65.900	ENSACLG00000025147	PABPN1L	96	65.873	Astatotilapia_calliptera
ENSELUG00000018385	PABPN1L	71	76.796	ENSAMXG00000010873	PABPN1L	68	75.691	Astyanax_mexicanus
ENSELUG00000018385	PABPN1L	68	55.376	ENSCJAG00000045284	PABPN1L	56	57.237	Callithrix_jacchus
ENSELUG00000018385	PABPN1L	63	50.000	ENSCPOG00000025951	PABPN1L	59	52.147	Cavia_porcellus
ENSELUG00000018385	PABPN1L	72	54.450	ENSCCAG00000027631	PABPN1L	64	54.857	Cebus_capucinus
ENSELUG00000018385	PABPN1L	63	57.738	ENSCATG00000031060	PABPN1L	55	60.667	Cercocebus_atys
ENSELUG00000018385	PABPN1L	58	53.846	ENSCLAG00000000704	PABPN1L	55	53.333	Chinchilla_lanigera
ENSELUG00000018385	PABPN1L	67	50.802	ENSCGRG00001013211	Pabpn1l	54	57.432	Cricetulus_griseus_chok1gshd
ENSELUG00000018385	PABPN1L	67	50.802	ENSCGRG00000015868	Pabpn1l	54	57.432	Cricetulus_griseus_crigri
ENSELUG00000018385	PABPN1L	95	65.587	ENSCSEG00000001142	pabpn1l	95	66.129	Cynoglossus_semilaevis
ENSELUG00000018385	PABPN1L	96	62.451	ENSCVAG00000015547	PABPN1L	96	66.929	Cyprinodon_variegatus
ENSELUG00000018385	PABPN1L	58	55.063	ENSEASG00005000777	PABPN1L	57	53.642	Equus_asinus_asinus
ENSELUG00000018385	PABPN1L	58	57.233	ENSECAG00000000378	PABPN1L	57	55.921	Equus_caballus
ENSELUG00000018385	PABPN1L	68	51.630	ENSFCAG00000010465	PABPN1L	59	51.829	Felis_catus
ENSELUG00000018385	PABPN1L	59	64.901	ENSFALG00000003319	PABPN1L	60	64.828	Ficedula_albicollis
ENSELUG00000018385	PABPN1L	58	55.769	ENSFDAG00000021067	PABPN1L	55	55.333	Fukomys_damarensis
ENSELUG00000018385	PABPN1L	99	61.686	ENSFHEG00000018295	PABPN1L	99	65.649	Fundulus_heteroclitus
ENSELUG00000018385	PABPN1L	96	69.922	ENSGMOG00000001475	PABPN1L	96	69.531	Gadus_morhua
ENSELUG00000018385	PABPN1L	68	57.062	ENSGALG00000006242	PABPN1L	68	62.500	Gallus_gallus
ENSELUG00000018385	PABPN1L	96	62.451	ENSGAFG00000012565	PABPN1L	96	66.929	Gambusia_affinis
ENSELUG00000018385	PABPN1L	96	62.357	ENSGACG00000015428	PABPN1L	96	64.729	Gasterosteus_aculeatus
ENSELUG00000018385	PABPN1L	66	56.497	ENSGGOG00000012670	PABPN1L	55	60.000	Gorilla_gorilla
ENSELUG00000018385	PABPN1L	99	65.649	ENSHBUG00000002388	PABPN1L	96	66.008	Haplochromis_burtoni
ENSELUG00000018385	PABPN1L	62	51.176	ENSHGLG00000014207	PABPN1L	63	51.235	Heterocephalus_glaber_female
ENSELUG00000018385	PABPN1L	62	51.176	ENSHGLG00100005230	PABPN1L	63	51.235	Heterocephalus_glaber_male
ENSELUG00000018385	PABPN1L	96	62.934	ENSHCOG00000004151	PABPN1L	96	63.707	Hippocampus_comes
ENSELUG00000018385	PABPN1L	70	69.832	ENSIPUG00000023583	PABPN1L	90	69.832	Ictalurus_punctatus
ENSELUG00000018385	PABPN1L	58	57.962	ENSSTOG00000020814	PABPN1L	51	58.389	Ictidomys_tridecemlineatus
ENSELUG00000018385	PABPN1L	64	52.353	ENSJJAG00000006433	Pabpn1l	54	56.164	Jaculus_jaculus
ENSELUG00000018385	PABPN1L	82	65.888	ENSKMAG00000001112	PABPN1L	94	66.197	Kryptolebias_marmoratus
ENSELUG00000018385	PABPN1L	99	64.151	ENSLBEG00000011647	PABPN1L	96	64.528	Labrus_bergylta
ENSELUG00000018385	PABPN1L	58	60.897	ENSMFAG00000002924	PABPN1L	55	60.667	Macaca_fascicularis
ENSELUG00000018385	PABPN1L	58	61.290	ENSMMUG00000012438	PABPN1L	54	59.732	Macaca_mulatta
ENSELUG00000018385	PABPN1L	58	60.897	ENSMNEG00000044808	PABPN1L	55	60.667	Macaca_nemestrina
ENSELUG00000018385	PABPN1L	63	58.580	ENSMLEG00000032667	PABPN1L	64	55.618	Mandrillus_leucophaeus
ENSELUG00000018385	PABPN1L	99	65.900	ENSMZEG00005002186	PABPN1L	96	65.873	Maylandia_zebra
ENSELUG00000018385	PABPN1L	66	52.247	ENSMAUG00000014032	Pabpn1l	67	49.718	Mesocricetus_auratus
ENSELUG00000018385	PABPN1L	63	51.786	ENSMICG00000028179	PABPN1L	59	51.852	Microcebus_murinus
ENSELUG00000018385	PABPN1L	69	50.543	ENSMOCG00000007955	Pabpn1l	55	53.378	Microtus_ochrogaster
ENSELUG00000018385	PABPN1L	76	63.317	ENSMMOG00000017714	PABPN1L	86	67.500	Mola_mola
ENSELUG00000018385	PABPN1L	62	57.396	ENSMODG00000003873	-	56	57.616	Monodelphis_domestica
ENSELUG00000018385	PABPN1L	96	64.567	ENSMALG00000016926	PABPN1L	96	65.217	Monopterus_albus
ENSELUG00000018385	PABPN1L	71	45.161	MGP_CAROLIEiJ_G0031670	Pabpn1l	54	54.730	Mus_caroli
ENSELUG00000018385	PABPN1L	67	49.198	ENSMUSG00000069867	Pabpn1l	54	55.405	Mus_musculus
ENSELUG00000018385	PABPN1L	63	48.947	MGP_PahariEiJ_G0023268	Pabpn1l	54	57.047	Mus_pahari
ENSELUG00000018385	PABPN1L	67	48.663	MGP_SPRETEiJ_G0032788	Pabpn1l	54	57.047	Mus_spretus
ENSELUG00000018385	PABPN1L	76	46.729	ENSNGAG00000023992	Pabpn1l	64	50.286	Nannospalax_galili
ENSELUG00000018385	PABPN1L	90	67.511	ENSNBRG00000017078	PABPN1L	99	66.667	Neolamprologus_brichardi
ENSELUG00000018385	PABPN1L	57	55.921	ENSOPRG00000005597	PABPN1L	55	55.333	Ochotona_princeps
ENSELUG00000018385	PABPN1L	57	54.248	ENSODEG00000004649	PABPN1L	53	53.741	Octodon_degus
ENSELUG00000018385	PABPN1L	62	57.317	ENSOANG00000013901	PABPN1L	58	57.616	Ornithorhynchus_anatinus
ENSELUG00000018385	PABPN1L	96	67.460	ENSORLG00000026560	PABPN1L	96	63.600	Oryzias_latipes
ENSELUG00000018385	PABPN1L	96	67.460	ENSORLG00020015068	PABPN1L	96	63.600	Oryzias_latipes_hni
ENSELUG00000018385	PABPN1L	96	67.460	ENSORLG00015000397	PABPN1L	96	63.600	Oryzias_latipes_hsok
ENSELUG00000018385	PABPN1L	96	64.683	ENSOMEG00000017896	PABPN1L	69	62.948	Oryzias_melastigma
ENSELUG00000018385	PABPN1L	73	48.259	ENSOGAG00000000433	PABPN1L	52	51.613	Otolemur_garnettii
ENSELUG00000018385	PABPN1L	63	56.805	ENSPPAG00000028866	PABPN1L	64	54.237	Pan_paniscus
ENSELUG00000018385	PABPN1L	63	53.801	ENSPPRG00000015106	PABPN1L	59	53.333	Panthera_pardus
ENSELUG00000018385	PABPN1L	63	53.374	ENSPTIG00000015606	PABPN1L	61	51.592	Panthera_tigris_altaica
ENSELUG00000018385	PABPN1L	63	56.805	ENSPTRG00000031120	PABPN1L	64	54.237	Pan_troglodytes
ENSELUG00000018385	PABPN1L	61	60.000	ENSPANG00000026039	PABPN1L	55	60.667	Papio_anubis
ENSELUG00000018385	PABPN1L	63	65.060	ENSPSIG00000003404	PABPN1L	76	67.123	Pelodiscus_sinensis
ENSELUG00000018385	PABPN1L	82	69.014	ENSPMGG00000013927	PABPN1L	94	68.075	Periophthalmus_magnuspinnatus
ENSELUG00000018385	PABPN1L	75	48.309	ENSPEMG00000016624	Pabpn1l	65	51.429	Peromyscus_maniculatus_bairdii
ENSELUG00000018385	PABPN1L	96	62.451	ENSPFOG00000007001	PABPN1L	96	66.929	Poecilia_formosa
ENSELUG00000018385	PABPN1L	96	62.451	ENSPLAG00000018431	PABPN1L	96	66.929	Poecilia_latipinna
ENSELUG00000018385	PABPN1L	69	58.470	ENSPMEG00000000169	-	90	63.587	Poecilia_mexicana
ENSELUG00000018385	PABPN1L	96	62.451	ENSPMEG00000009108	PABPN1L	96	66.929	Poecilia_mexicana
ENSELUG00000018385	PABPN1L	85	63.348	ENSPREG00000022533	PABPN1L	91	69.194	Poecilia_reticulata
ENSELUG00000018385	PABPN1L	73	51.980	ENSPPYG00000007655	PABPN1L	54	60.265	Pongo_abelii
ENSELUG00000018385	PABPN1L	71	50.256	ENSPCOG00000024077	PABPN1L	55	54.667	Propithecus_coquereli
ENSELUG00000018385	PABPN1L	61	54.819	ENSPVAG00000002716	PABPN1L	58	53.659	Pteropus_vampyrus
ENSELUG00000018385	PABPN1L	99	65.900	ENSPNYG00000004803	PABPN1L	96	65.873	Pundamilia_nyererei
ENSELUG00000018385	PABPN1L	75	47.393	ENSRNOG00000029558	Pabpn1l	55	55.405	Rattus_norvegicus
ENSELUG00000018385	PABPN1L	63	56.805	ENSRBIG00000030740	PABPN1L	55	60.000	Rhinopithecus_bieti
ENSELUG00000018385	PABPN1L	63	56.805	ENSRROG00000032240	-	64	54.237	Rhinopithecus_roxellana
ENSELUG00000018385	PABPN1L	63	55.882	ENSRROG00000035483	-	64	53.672	Rhinopithecus_roxellana
ENSELUG00000018385	PABPN1L	63	56.627	ENSSBOG00000018410	PABPN1L	64	53.714	Saimiri_boliviensis_boliviensis
ENSELUG00000018385	PABPN1L	67	56.150	ENSSHAG00000010001	-	56	56.364	Sarcophilus_harrisii
ENSELUG00000018385	PABPN1L	95	66.275	ENSSMAG00000021348	PABPN1L	95	67.451	Scophthalmus_maximus
ENSELUG00000018385	PABPN1L	99	62.214	ENSSDUG00000006986	PABPN1L	96	67.323	Seriola_dumerili
ENSELUG00000018385	PABPN1L	99	61.832	ENSSLDG00000021845	PABPN1L	96	66.929	Seriola_lalandi_dorsalis
ENSELUG00000018385	PABPN1L	57	66.438	ENSSPUG00000007031	PABPN1L	63	66.667	Sphenodon_punctatus
ENSELUG00000018385	PABPN1L	99	65.779	ENSSPAG00000017978	PABPN1L	96	65.748	Stegastes_partitus
ENSELUG00000018385	PABPN1L	66	51.977	ENSSSCG00000036367	PABPN1L	59	50.932	Sus_scrofa
ENSELUG00000018385	PABPN1L	81	67.290	ENSTRUG00000024725	PABPN1L	91	67.757	Takifugu_rubripes
ENSELUG00000018385	PABPN1L	73	69.792	ENSTNIG00000009416	PABPN1L	99	70.833	Tetraodon_nigroviridis
ENSELUG00000018385	PABPN1L	60	55.090	ENSXETG00000011258	pabpn1l	77	55.090	Xenopus_tropicalis
ENSELUG00000018385	PABPN1L	79	65.366	ENSXCOG00000003254	PABPN1L	91	69.194	Xiphophorus_couchianus
ENSELUG00000018385	PABPN1L	75	66.837	ENSXMAG00000029090	PABPN1L	88	71.574	Xiphophorus_maculatus