EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSELUG00000018443 (Gene tree)
Gene ID
105023816
Gene Symbol
-
Alias
-
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Esox_lucius
Status
putative
Strand
Plus strand
Length
16074 bases
Position
chrLG03:8229997-8246070
Accession
105023816
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSELUP00000019018RRM_1PF00076.221.8e-4212
ENSELUP00000019018RRM_1PF00076.221.8e-4222
ENSELUP00000019034RRM_1PF00076.222.3e-4212
ENSELUP00000019034RRM_1PF00076.222.3e-4222
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSELUT00000029047-1503XM_020045560ENSELUP00000019018500 (aa)XP_019901119-
ENSELUT00000029083-5020XM_010893297ENSELUP00000019034529 (aa)XP_010891599UPI00057770F2
Gene Model
Click here to download ENSELUG00000018443's gene model file
Pathways
Pathway IDPathway NameSource
els03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000018443's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSELUG00000018443-6636.275ENSELUG00000018459-8436.275
ENSELUG00000018443-10085.741ENSELUG00000006507puf60b10085.138
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSELUG00000018443-9985.602ENSG00000179950PUF6010085.687Homo_sapiens
ENSELUG00000018443-10087.925ENSAPOG00000001713puf60b10087.925Acanthochromis_polyacanthus
ENSELUG00000018443-9883.144ENSAMEG00000006406PUF609681.468Ailuropoda_melanoleuca
ENSELUG00000018443-9881.431ENSACIG00000003263-10081.467Amphilophus_citrinellus
ENSELUG00000018443-9888.395ENSACIG00000021705puf60b10088.395Amphilophus_citrinellus
ENSELUG00000018443-10087.925ENSAOCG00000005395puf60b10088.781Amphiprion_ocellaris
ENSELUG00000018443-10086.389ENSAOCG00000015558-10086.389Amphiprion_ocellaris
ENSELUG00000018443-10078.287ENSAPEG00000001836-10080.279Amphiprion_percula
ENSELUG00000018443-9986.400ENSAPEG00000011923puf60b9786.400Amphiprion_percula
ENSELUG00000018443-10086.200ENSATEG00000006303-10086.578Anabas_testudineus
ENSELUG00000018443-10087.925ENSATEG00000001730puf60b10087.925Anabas_testudineus
ENSELUG00000018443-9885.985ENSAPLG00000010150PUF609986.174Anas_platyrhynchos
ENSELUG00000018443-9884.934ENSACAG00000001645PUF609884.544Anolis_carolinensis
ENSELUG00000018443-9985.799ENSANAG00000018626PUF6010085.878Aotus_nancymaae
ENSELUG00000018443-9988.400ENSACLG00000004462puf60b10088.400Astatotilapia_calliptera
ENSELUG00000018443-9991.633ENSAMXG00000036570puf60a9791.633Astyanax_mexicanus
ENSELUG00000018443-9980.039ENSAMXG00000041030puf60b10080.303Astyanax_mexicanus
ENSELUG00000018443-9985.602ENSBTAG00000037493PUF6010084.387Bos_taurus
ENSELUG00000018443-8451.773WBGene00004389rnp-68652.703Caenorhabditis_elegans
ENSELUG00000018443-9985.602ENSCJAG00000021485PUF6010084.387Callithrix_jacchus
ENSELUG00000018443-9985.799ENSCAFG00000001400PUF609683.303Canis_familiaris
ENSELUG00000018443-9985.799ENSCAFG00020018754PUF6010084.572Canis_lupus_dingo
ENSELUG00000018443-9885.038ENSCHIG00000001618PUF608983.486Capra_hircus
ENSELUG00000018443-10084.758ENSTSYG00000011912PUF6010085.878Carlito_syrichta
ENSELUG00000018443-9980.822ENSCPOG00000014613PUF609778.871Cavia_porcellus
ENSELUG00000018443-9985.404ENSCCAG00000007744PUF6010084.572Cebus_capucinus
ENSELUG00000018443-9985.602ENSCATG00000035405PUF6010084.387Cercocebus_atys
ENSELUG00000018443-9985.996ENSCLAG00000009154PUF609583.853Chinchilla_lanigera
ENSELUG00000018443-9885.687ENSCSAG00000008878PUF6010085.687Chlorocebus_sabaeus
ENSELUG00000018443-9885.985ENSCPBG00000005595PUF609985.366Chrysemys_picta_bellii
ENSELUG00000018443-9850.680ENSCING00000008436-9949.165Ciona_intestinalis
ENSELUG00000018443-6261.468ENSCING00000002156-8861.468Ciona_intestinalis
ENSELUG00000018443-9754.580ENSCSAVG00000001385-9954.857Ciona_savignyi
ENSELUG00000018443-9750.719ENSCSAVG00000004765-9750.000Ciona_savignyi
ENSELUG00000018443-8084.559ENSCANG00000041843PUF6010084.706Colobus_angolensis_palliatus
ENSELUG00000018443-9985.799ENSCGRG00001017442Puf609583.670Cricetulus_griseus_chok1gshd
ENSELUG00000018443-9885.227ENSCGRG00000003717Puf609285.227Cricetulus_griseus_crigri
ENSELUG00000018443-10079.441ENSCSEG00000014845-8981.637Cynoglossus_semilaevis
ENSELUG00000018443-9987.713ENSCSEG00000019887puf60b9487.713Cynoglossus_semilaevis
ENSELUG00000018443-9085.301ENSCVAG00000001560-9884.289Cyprinodon_variegatus
ENSELUG00000018443-9988.400ENSCVAG00000009386puf60b10088.400Cyprinodon_variegatus
ENSELUG00000018443-10080.117ENSDARG00000001241puf60b10093.701Danio_rerio
ENSELUG00000018443-9890.076ENSDARG00000032175puf60a10094.492Danio_rerio
ENSELUG00000018443-9671.262ENSDNOG00000043278PUF609071.262Dasypus_novemcinctus
ENSELUG00000018443-9985.799ENSDORG00000004585Puf609783.670Dipodomys_ordii
ENSELUG00000018443-9751.681FBgn0028577hfp9948.168Drosophila_melanogaster
ENSELUG00000018443-9770.697ENSEBUG00000005470-8870.842Eptatretus_burgeri
ENSELUG00000018443-9962.435ENSEBUG00000014291puf60b8464.348Eptatretus_burgeri
ENSELUG00000018443-9985.799ENSEASG00005009695PUF6010084.572Equus_asinus_asinus
ENSELUG00000018443-9985.799ENSECAG00000024681PUF609785.227Equus_caballus
ENSELUG00000018443-9985.404ENSFCAG00000001045PUF6010085.496Felis_catus
ENSELUG00000018443-9876.326ENSFALG00000001136PUF609876.938Ficedula_albicollis
ENSELUG00000018443-9985.799ENSFDAG00000017177PUF609583.853Fukomys_damarensis
ENSELUG00000018443-9385.020ENSFHEG00000021687PUF6010085.361Fundulus_heteroclitus
ENSELUG00000018443-10087.925ENSFHEG00000020046puf60b10088.600Fundulus_heteroclitus
ENSELUG00000018443-9975.740ENSGMOG00000006392puf60b9975.494Gadus_morhua
ENSELUG00000018443-6490.379ENSGALG00000039901PUF609490.379Gallus_gallus
ENSELUG00000018443-10087.925ENSGAFG00000021040puf60b10088.588Gambusia_affinis
ENSELUG00000018443-10083.865ENSGAFG00000004334-10083.068Gambusia_affinis
ENSELUG00000018443-9976.091ENSGACG00000004717puf60b9877.011Gasterosteus_aculeatus
ENSELUG00000018443-10073.446ENSGACG00000001484-10073.938Gasterosteus_aculeatus
ENSELUG00000018443-9986.391ENSGAGG00000013289PUF609186.588Gopherus_agassizii
ENSELUG00000018443-9985.602ENSGGOG00000004646PUF6010084.387Gorilla_gorilla
ENSELUG00000018443-10086.389ENSHBUG00000009634-10086.774Haplochromis_burtoni
ENSELUG00000018443-10087.736ENSHBUG00000015118puf60b10088.400Haplochromis_burtoni
ENSELUG00000018443-9985.799ENSHGLG00000006111PUF609583.853Heterocephalus_glaber_female
ENSELUG00000018443-9985.799ENSHGLG00100012362PUF609583.853Heterocephalus_glaber_male
ENSELUG00000018443-9867.913ENSHCOG00000000378-9967.790Hippocampus_comes
ENSELUG00000018443-9985.465ENSHCOG00000015541puf60b10085.794Hippocampus_comes
ENSELUG00000018443-10080.777ENSIPUG00000004660puf60b10080.303Ictalurus_punctatus
ENSELUG00000018443-10090.239ENSIPUG00000002453puf60a10089.905Ictalurus_punctatus
ENSELUG00000018443-9885.417ENSSTOG00000025037PUF609683.853Ictidomys_tridecemlineatus
ENSELUG00000018443-9985.799ENSJJAG00000001076Puf609683.670Jaculus_jaculus
ENSELUG00000018443-9881.439ENSKMAG00000010106-10081.061Kryptolebias_marmoratus
ENSELUG00000018443-9888.588ENSKMAG00000016745puf60b10088.588Kryptolebias_marmoratus
ENSELUG00000018443-9988.312ENSLBEG00000012505puf60b10088.312Labrus_bergylta
ENSELUG00000018443-7380.914ENSLACG00000005456PUF6010080.376Latimeria_chalumnae
ENSELUG00000018443-10091.525ENSLOCG00000010106puf60b10091.714Lepisosteus_oculatus
ENSELUG00000018443-9884.470ENSLAFG00000022929PUF609682.904Loxodonta_africana
ENSELUG00000018443-9985.602ENSMFAG00000043373PUF6010084.387Macaca_fascicularis
ENSELUG00000018443-9985.602ENSMMUG00000013558PUF6010084.387Macaca_mulatta
ENSELUG00000018443-9985.602ENSMNEG00000031099PUF6010084.387Macaca_nemestrina
ENSELUG00000018443-9985.602ENSMLEG00000040009PUF6010085.687Mandrillus_leucophaeus
ENSELUG00000018443-9987.786ENSMAMG00000010394puf60b10085.876Mastacembelus_armatus
ENSELUG00000018443-10086.981ENSMAMG00000019476-10087.358Mastacembelus_armatus
ENSELUG00000018443-10086.578ENSMZEG00005019425-10086.578Maylandia_zebra
ENSELUG00000018443-9988.400ENSMZEG00005018515puf60b10088.400Maylandia_zebra
ENSELUG00000018443-9985.366ENSMGAG00000013070PUF609590.698Meleagris_gallopavo
ENSELUG00000018443-9570.612ENSMAUG00000018549-9570.612Mesocricetus_auratus
ENSELUG00000018443-6790.087ENSMAUG00000014267-9386.614Mesocricetus_auratus
ENSELUG00000018443-10084.572ENSMICG00000012226PUF6010084.572Microcebus_murinus
ENSELUG00000018443-9985.799ENSMOCG00000018780Puf609683.670Microtus_ochrogaster
ENSELUG00000018443-9888.588ENSMMOG00000004217puf60b10088.588Mola_mola
ENSELUG00000018443-10077.046ENSMMOG00000018059-9976.941Mola_mola
ENSELUG00000018443-9985.996ENSMODG00000009161PUF609385.996Monodelphis_domestica
ENSELUG00000018443-10085.633ENSMALG00000000200-10085.822Monopterus_albus
ENSELUG00000018443-10080.755ENSMALG00000006797puf60b10080.755Monopterus_albus
ENSELUG00000018443-9985.996MGP_CAROLIEiJ_G0019910Puf609584.037Mus_caroli
ENSELUG00000018443-9985.996ENSMUSG00000002524Puf609584.037Mus_musculus
ENSELUG00000018443-9985.996MGP_PahariEiJ_G0019920Puf609584.037Mus_pahari
ENSELUG00000018443-9985.996MGP_SPRETEiJ_G0020812Puf609584.037Mus_spretus
ENSELUG00000018443-9885.227ENSMPUG00000008137PUF609583.670Mustela_putorius_furo
ENSELUG00000018443-9884.659ENSMLUG00000000238-9683.119Myotis_lucifugus
ENSELUG00000018443-9982.446ENSMLUG00000013032-9782.446Myotis_lucifugus
ENSELUG00000018443-9985.799ENSNGAG00000000712Puf6010085.878Nannospalax_galili
ENSELUG00000018443-10086.604ENSNBRG00000017223-10086.011Neolamprologus_brichardi
ENSELUG00000018443-8384.889ENSNBRG00000013047puf60b9787.173Neolamprologus_brichardi
ENSELUG00000018443-9985.602ENSNLEG00000002156PUF609984.428Nomascus_leucogenys
ENSELUG00000018443-7094.585ENSOPRG00000002147PUF607294.585Ochotona_princeps
ENSELUG00000018443-7091.331ENSODEG00000014024-9490.625Octodon_degus
ENSELUG00000018443-9563.976ENSODEG00000015513-9861.597Octodon_degus
ENSELUG00000018443-10085.822ENSONIG00000014030-9886.948Oreochromis_niloticus
ENSELUG00000018443-9988.145ENSONIG00000006247puf60b9888.314Oreochromis_niloticus
ENSELUG00000018443-9771.012ENSOANG00000006962PUF609970.428Ornithorhynchus_anatinus
ENSELUG00000018443-9883.525ENSORLG00000028655-9983.525Oryzias_latipes
ENSELUG00000018443-10087.925ENSORLG00000012279puf60b10088.588Oryzias_latipes
ENSELUG00000018443-10087.925ENSORLG00020007333puf6010088.588Oryzias_latipes_hni
ENSELUG00000018443-9983.962ENSORLG00020018144-9983.962Oryzias_latipes_hni
ENSELUG00000018443-10087.547ENSORLG00015007718puf60b10088.201Oryzias_latipes_hsok
ENSELUG00000018443-9983.962ENSORLG00015016833-9983.962Oryzias_latipes_hsok
ENSELUG00000018443-10086.322ENSOMEG00000001643puf60b10086.322Oryzias_melastigma
ENSELUG00000018443-10085.060ENSOMEG00000022185-9984.528Oryzias_melastigma
ENSELUG00000018443-9885.417ENSOGAG00000006259PUF609683.853Otolemur_garnettii
ENSELUG00000018443-9883.429ENSOARG00000016235PUF609883.429Ovis_aries
ENSELUG00000018443-9985.602ENSPPAG00000029933PUF6010084.387Pan_paniscus
ENSELUG00000018443-9985.404ENSPPRG00000003257PUF6010085.496Panthera_pardus
ENSELUG00000018443-9985.207ENSPTIG00000009795PUF6010081.869Panthera_tigris_altaica
ENSELUG00000018443-9985.602ENSPTRG00000043963-9984.428Pan_troglodytes
ENSELUG00000018443-9985.602ENSPTRG00000020670PUF6010084.387Pan_troglodytes
ENSELUG00000018443-9985.602ENSPANG00000021936PUF6010084.387Papio_anubis
ENSELUG00000018443-10091.132ENSPKIG00000012204puf60b10091.683Paramormyrops_kingsleyae
ENSELUG00000018443-10093.426ENSPKIG00000004295puf60a10095.536Paramormyrops_kingsleyae
ENSELUG00000018443-9885.417ENSPSIG00000004679PUF609985.606Pelodiscus_sinensis
ENSELUG00000018443-10084.921ENSPMGG00000013444puf60b10086.590Periophthalmus_magnuspinnatus
ENSELUG00000018443-9985.799ENSPEMG00000008820Puf609583.670Peromyscus_maniculatus_bairdii
ENSELUG00000018443-9985.996ENSPCIG00000020270PUF609985.417Phascolarctos_cinereus
ENSELUG00000018443-10084.557ENSPFOG00000011118-10083.804Poecilia_formosa
ENSELUG00000018443-10087.925ENSPFOG00000019217puf60b9888.600Poecilia_formosa
ENSELUG00000018443-10084.746ENSPLAG00000017025-9283.616Poecilia_latipinna
ENSELUG00000018443-9988.600ENSPLAG00000010754puf60b10088.600Poecilia_latipinna
ENSELUG00000018443-10087.925ENSPMEG00000000838puf60b10088.600Poecilia_mexicana
ENSELUG00000018443-10084.934ENSPMEG00000009767-9284.181Poecilia_mexicana
ENSELUG00000018443-9986.800ENSPREG00000005440puf60b10086.800Poecilia_reticulata
ENSELUG00000018443-7983.059ENSPPYG00000018951-9583.059Pongo_abelii
ENSELUG00000018443-7984.706ENSPCAG00000014837PUF6010084.706Procavia_capensis
ENSELUG00000018443-9985.602ENSPCOG00000027981PUF6010084.387Propithecus_coquereli
ENSELUG00000018443-9895.570ENSPVAG00000016167PUF608195.570Pteropus_vampyrus
ENSELUG00000018443-10086.578ENSPNYG00000004273-10086.578Pundamilia_nyererei
ENSELUG00000018443-9888.395ENSPNYG00000002556puf60b10088.395Pundamilia_nyererei
ENSELUG00000018443-10082.236ENSPNAG00000019415puf60b8982.236Pygocentrus_nattereri
ENSELUG00000018443-9991.833ENSPNAG00000019909puf60a9991.833Pygocentrus_nattereri
ENSELUG00000018443-9985.996ENSRNOG00000009960Puf609584.037Rattus_norvegicus
ENSELUG00000018443-9985.602ENSRBIG00000035274PUF6010084.387Rhinopithecus_bieti
ENSELUG00000018443-9985.602ENSRROG00000029360PUF6010084.387Rhinopithecus_roxellana
ENSELUG00000018443-9984.221ENSSBOG00000027089PUF609982.868Saimiri_boliviensis_boliviensis
ENSELUG00000018443-8884.454ENSSHAG00000006668PUF609084.454Sarcophilus_harrisii
ENSELUG00000018443-10087.748ENSSFOG00015019371puf60a9893.712Scleropages_formosus
ENSELUG00000018443-9983.597ENSSFOG00015019619puf60b9985.885Scleropages_formosus
ENSELUG00000018443-7491.724ENSSMAG00000016381puf60b7591.724Scophthalmus_maximus
ENSELUG00000018443-9984.762ENSSDUG00000007048-9985.143Seriola_dumerili
ENSELUG00000018443-9986.704ENSSDUG00000009935puf60b9987.169Seriola_dumerili
ENSELUG00000018443-10083.430ENSSLDG00000007366-10083.654Seriola_lalandi_dorsalis
ENSELUG00000018443-9888.462ENSSLDG00000024011puf60b10086.441Seriola_lalandi_dorsalis
ENSELUG00000018443-6379.697ENSSPUG00000013518PUF609279.697Sphenodon_punctatus
ENSELUG00000018443-9887.016ENSSPAG00000020285-10087.597Stegastes_partitus
ENSELUG00000018443-10085.294ENSSPAG00000012144puf60b10086.629Stegastes_partitus
ENSELUG00000018443-9985.602ENSSSCG00000038800PUF609785.602Sus_scrofa
ENSELUG00000018443-9882.732ENSTGUG00000012797-9983.491Taeniopygia_guttata
ENSELUG00000018443-9984.369ENSTRUG00000008843-10083.968Takifugu_rubripes
ENSELUG00000018443-10087.170ENSTRUG00000005420puf60b10085.366Takifugu_rubripes
ENSELUG00000018443-9988.145ENSTNIG00000013675puf60b9988.314Tetraodon_nigroviridis
ENSELUG00000018443-9882.342ENSTNIG00000003069-9982.150Tetraodon_nigroviridis
ENSELUG00000018443-7667.232ENSTBEG00000001899-10068.644Tupaia_belangeri
ENSELUG00000018443-5986.149ENSTBEG00000002751-9787.285Tupaia_belangeri
ENSELUG00000018443-9883.939ENSTTRG00000017088PUF6010083.939Tursiops_truncatus
ENSELUG00000018443-9985.799ENSUAMG00000024917PUF6010084.572Ursus_americanus
ENSELUG00000018443-9880.114ENSUMAG00000000272PUF609678.532Ursus_maritimus
ENSELUG00000018443-9985.799ENSVVUG00000022527PUF6010085.878Vulpes_vulpes
ENSELUG00000018443-9985.207ENSXETG00000012469puf609885.404Xenopus_tropicalis
ENSELUG00000018443-9988.600ENSXCOG00000012355puf60b10088.600Xiphophorus_couchianus
ENSELUG00000018443-10087.925ENSXMAG00000001862puf60b10088.588Xiphophorus_maculatus
ENSELUG00000018443-10084.861ENSXMAG00000010507-9884.661Xiphophorus_maculatus

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