EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSELUG00000018459 (Gene tree)
Gene ID
105022945
Gene Symbol
-
Alias
-
Full Name
splicing factor U2AF 65 kDa subunit
Gene Type
protein_coding
Species
Esox_lucius
Status
putative
Strand
Minus strand
Length
11090 bases
Position
chrLG11:27488721-27499810
Accession
105022945
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSELUP00000019032RRM_1PF00076.222.5e-3413
ENSELUP00000019032RRM_1PF00076.222.5e-3423
ENSELUP00000019032RRM_1PF00076.222.5e-3433
ENSELUP00000019044RRM_1PF00076.223.4e-3413
ENSELUP00000019044RRM_1PF00076.223.4e-3423
ENSELUP00000019044RRM_1PF00076.223.4e-3433
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSELUT00000040832-4698XM_010891729ENSELUP00000019044466 (aa)XP_010890031UPI0005780C28
ENSELUT00000029067-1317-ENSELUP00000019032438 (aa)--
Gene Model
Click here to download ENSELUG00000018459's gene model file
Pathways
Pathway IDPathway NameSource
els03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000018459's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSELUG00000018459-10072.407ENSELUG00000015850u2af2a9972.176
ENSELUG00000018459-10071.125ENSELUG00000022291u2af2b9970.913
ENSELUG00000018459-8435.294ENSELUG00000006507puf60b6135.294
ENSELUG00000018459-8436.275ENSELUG00000018443-6636.275
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSELUG00000018459-10071.489ENSG00000063244U2AF29982.353Homo_sapiens
ENSELUG00000018459-10093.133ENSAPOG00000002208-10093.133Acanthochromis_polyacanthus
ENSELUG00000018459-6876.087ENSAPOG00000023155u2af2a9976.087Acanthochromis_polyacanthus
ENSELUG00000018459-7879.714ENSAMEG00000003864U2AF210074.029Ailuropoda_melanoleuca
ENSELUG00000018459-9790.632ENSACIG00000014173-9990.632Amphilophus_citrinellus
ENSELUG00000018459-8580.263ENSACIG00000005749u2af2a9378.250Amphilophus_citrinellus
ENSELUG00000018459-10074.043ENSAOCG00000015571u2af2a10074.043Amphiprion_ocellaris
ENSELUG00000018459-10093.133ENSAOCG00000003595-10093.133Amphiprion_ocellaris
ENSELUG00000018459-9891.209ENSAPEG00000020062-9891.209Amphiprion_percula
ENSELUG00000018459-8580.263ENSAPEG00000009376u2af2a9478.250Amphiprion_percula
ENSELUG00000018459-9792.667ENSATEG00000020577-9992.667Anabas_testudineus
ENSELUG00000018459-10073.150ENSATEG00000022332u2af2a9973.617Anabas_testudineus
ENSELUG00000018459-10072.611ENSACAG00000015489U2AF29973.237Anolis_carolinensis
ENSELUG00000018459-8981.818ENSANAG00000028042U2AF29981.818Aotus_nancymaae
ENSELUG00000018459-10092.918ENSACLG00000020793-10092.918Astatotilapia_calliptera
ENSELUG00000018459-10074.043ENSACLG00000022181u2af2a9974.043Astatotilapia_calliptera
ENSELUG00000018459-10068.973ENSAMXG00000033347u2af2a9970.355Astyanax_mexicanus
ENSELUG00000018459-10070.362ENSAMXG00000039454u2af2b9972.824Astyanax_mexicanus
ENSELUG00000018459-10072.863ENSBTAG00000002830U2AF29975.267Bos_taurus
ENSELUG00000018459-9452.164WBGene00006697uaf-110054.545Caenorhabditis_elegans
ENSELUG00000018459-10070.886ENSCJAG00000017128U2AF29974.684Callithrix_jacchus
ENSELUG00000018459-10071.489ENSCAFG00000002551U2AF29975.319Canis_familiaris
ENSELUG00000018459-8979.449ENSCAFG00020015445U2AF29771.639Canis_lupus_dingo
ENSELUG00000018459-8867.419ENSCHIG00000023595U2AF29066.024Capra_hircus
ENSELUG00000018459-10070.886ENSTSYG00000007432U2AF29974.684Carlito_syrichta
ENSELUG00000018459-8879.798ENSCAPG00000008466U2AF29974.617Cavia_aperea
ENSELUG00000018459-10070.886ENSCPOG00000001582U2AF29974.684Cavia_porcellus
ENSELUG00000018459-10070.886ENSCCAG00000023336U2AF29974.684Cebus_capucinus
ENSELUG00000018459-10071.489ENSCATG00000004637U2AF29975.319Cercocebus_atys
ENSELUG00000018459-10071.489ENSCLAG00000000596U2AF29975.319Chinchilla_lanigera
ENSELUG00000018459-10071.489ENSCSAG00000001722U2AF29975.319Chlorocebus_sabaeus
ENSELUG00000018459-8778.680ENSCPBG00000004485U2AF29982.353Chrysemys_picta_bellii
ENSELUG00000018459-8770.026ENSCING00000003455-8368.564Ciona_intestinalis
ENSELUG00000018459-8767.866ENSCSAVG00000006813-9065.625Ciona_savignyi
ENSELUG00000018459-9170.561ENSCANG00000031002-9674.766Colobus_angolensis_palliatus
ENSELUG00000018459-10066.390ENSCANG00000043845-9971.610Colobus_angolensis_palliatus
ENSELUG00000018459-10068.017ENSCGRG00001007486-9969.296Cricetulus_griseus_chok1gshd
ENSELUG00000018459-10072.863ENSCGRG00001003185-9975.267Cricetulus_griseus_chok1gshd
ENSELUG00000018459-10068.017ENSCGRG00000018587-9969.296Cricetulus_griseus_crigri
ENSELUG00000018459-5379.916ENSCGRG00000004524-8276.680Cricetulus_griseus_crigri
ENSELUG00000018459-6873.718ENSCSEG00000018709u2af2a9572.436Cynoglossus_semilaevis
ENSELUG00000018459-10086.695ENSCSEG00000020504-9486.910Cynoglossus_semilaevis
ENSELUG00000018459-10074.043ENSCVAG00000001259u2af2a9974.043Cyprinodon_variegatus
ENSELUG00000018459-10091.202ENSCVAG00000023307-10091.202Cyprinodon_variegatus
ENSELUG00000018459-10070.576ENSDARG00000012505u2af2a9970.339Danio_rerio
ENSELUG00000018459-10072.421ENSDARG00000011740u2af2b9970.697Danio_rerio
ENSELUG00000018459-9170.561ENSDNOG00000047039U2AF29674.766Dasypus_novemcinctus
ENSELUG00000018459-10070.886ENSDORG00000003250U2af29974.684Dipodomys_ordii
ENSELUG00000018459-8951.835FBgn0034834LS28853.827Drosophila_melanogaster
ENSELUG00000018459-8773.008FBgn0005411U2af5010073.713Drosophila_melanogaster
ENSELUG00000018459-8762.592ENSEBUG00000001732U2AF29758.515Eptatretus_burgeri
ENSELUG00000018459-9868.981ENSEBUG00000010917U2AF210065.823Eptatretus_burgeri
ENSELUG00000018459-8879.798ENSEASG00005020708U2AF29074.836Equus_asinus_asinus
ENSELUG00000018459-10072.863ENSECAG00000010110U2AF29975.267Equus_caballus
ENSELUG00000018459-10070.886ENSFCAG00000011504U2AF29974.684Felis_catus
ENSELUG00000018459-8879.798ENSFDAG00000011264U2AF29973.291Fukomys_damarensis
ENSELUG00000018459-10073.109ENSFHEG00000016025u2af2a9974.043Fundulus_heteroclitus
ENSELUG00000018459-10071.550ENSGMOG00000004535u2af2a9971.518Gadus_morhua
ENSELUG00000018459-9773.026ENSGALG00000052748U2AF26573.820Gallus_gallus
ENSELUG00000018459-10074.043ENSGAFG00000013626u2af2a8874.043Gambusia_affinis
ENSELUG00000018459-10088.841ENSGAFG00000005628-10088.412Gambusia_affinis
ENSELUG00000018459-10084.076ENSGACG00000014500-10083.093Gasterosteus_aculeatus
ENSELUG00000018459-10071.581ENSGACG00000010632U2AF29973.191Gasterosteus_aculeatus
ENSELUG00000018459-6882.353ENSGAGG00000011849U2AF29982.353Gopherus_agassizii
ENSELUG00000018459-5773.047ENSGGOG00000036399-9673.047Gorilla_gorilla
ENSELUG00000018459-10092.918ENSHBUG00000017424-10092.918Haplochromis_burtoni
ENSELUG00000018459-10074.043ENSHBUG00000013935u2af2a9974.043Haplochromis_burtoni
ENSELUG00000018459-10070.886ENSHGLG00000005889U2AF29974.684Heterocephalus_glaber_female
ENSELUG00000018459-8879.798ENSHGLG00100004757U2AF29974.617Heterocephalus_glaber_male
ENSELUG00000018459-10070.675ENSHCOG00000019367u2af2a9971.849Hippocampus_comes
ENSELUG00000018459-10070.576ENSIPUG00000007717u2af2a9969.703Ictalurus_punctatus
ENSELUG00000018459-10071.429ENSIPUG00000009077u2af29971.967Ictalurus_punctatus
ENSELUG00000018459-10084.549ENSIPUG00000009844-10084.120Ictalurus_punctatus
ENSELUG00000018459-10070.886ENSSTOG00000019595U2AF29974.684Ictidomys_tridecemlineatus
ENSELUG00000018459-10070.886ENSJJAG00000017705U2af29974.684Jaculus_jaculus
ENSELUG00000018459-10073.362ENSKMAG00000005960u2af2a9973.830Kryptolebias_marmoratus
ENSELUG00000018459-10073.830ENSLBEG00000016162u2af2a9973.830Labrus_bergylta
ENSELUG00000018459-9789.325ENSLBEG00000005001-9989.325Labrus_bergylta
ENSELUG00000018459-8281.148ENSLACG00000001648U2AF29981.148Latimeria_chalumnae
ENSELUG00000018459-6182.090ENSLOCG00000008050u2af2b8278.947Lepisosteus_oculatus
ENSELUG00000018459-10089.914ENSLOCG00000010843-10089.914Lepisosteus_oculatus
ENSELUG00000018459-10068.943ENSLAFG00000028496-9967.234Loxodonta_africana
ENSELUG00000018459-10071.915ENSLAFG00000018056-9975.532Loxodonta_africana
ENSELUG00000018459-10070.886ENSMFAG00000038383U2AF29974.684Macaca_fascicularis
ENSELUG00000018459-10070.675ENSMMUG00000004810U2AF29974.473Macaca_mulatta
ENSELUG00000018459-10071.489ENSMNEG00000042096U2AF29975.319Macaca_nemestrina
ENSELUG00000018459-8880.612ENSMLEG00000032219U2AF28975.330Mandrillus_leucophaeus
ENSELUG00000018459-10070.464ENSMAMG00000019817u2af2a9972.899Mastacembelus_armatus
ENSELUG00000018459-10089.914ENSMAMG00000020158-10089.914Mastacembelus_armatus
ENSELUG00000018459-10092.918ENSMZEG00005023318-10092.918Maylandia_zebra
ENSELUG00000018459-10074.043ENSMZEG00005016563u2af2a9974.043Maylandia_zebra
ENSELUG00000018459-8879.798ENSMAUG00000008180U2af29974.138Mesocricetus_auratus
ENSELUG00000018459-10071.489ENSMICG00000027681U2AF29975.319Microcebus_murinus
ENSELUG00000018459-10068.889ENSMOCG00000007227-9967.377Microtus_ochrogaster
ENSELUG00000018459-6879.412ENSMOCG00000001018-9979.412Microtus_ochrogaster
ENSELUG00000018459-10070.886ENSMOCG00000013214-9974.684Microtus_ochrogaster
ENSELUG00000018459-10075.833ENSMMOG00000000531-10075.208Mola_mola
ENSELUG00000018459-8580.263ENSMMOG00000016600u2af2a9278.250Mola_mola
ENSELUG00000018459-10071.581ENSMALG00000009985u2af2a9973.830Monopterus_albus
ENSELUG00000018459-10071.489MGP_CAROLIEiJ_G0029150U2af29975.319Mus_caroli
ENSELUG00000018459-10071.489ENSMUSG00000030435U2af29982.353Mus_musculus
ENSELUG00000018459-10071.489MGP_PahariEiJ_G0021017U2af29975.319Mus_pahari
ENSELUG00000018459-10071.489MGP_SPRETEiJ_G0030203U2af29975.319Mus_spretus
ENSELUG00000018459-10071.489ENSMPUG00000007135U2AF29975.319Mustela_putorius_furo
ENSELUG00000018459-5277.500ENSMLUG00000011051-9977.500Myotis_lucifugus
ENSELUG00000018459-10070.886ENSNGAG00000020369U2af29974.684Nannospalax_galili
ENSELUG00000018459-9790.850ENSNBRG00000011100-9990.850Neolamprologus_brichardi
ENSELUG00000018459-10074.043ENSNBRG00000002568u2af2a9974.043Neolamprologus_brichardi
ENSELUG00000018459-10063.080ENSNLEG00000010562U2AF29982.353Nomascus_leucogenys
ENSELUG00000018459-8869.054ENSMEUG00000002346U2AF29965.121Notamacropus_eugenii
ENSELUG00000018459-10065.823ENSODEG00000012729-9969.620Octodon_degus
ENSELUG00000018459-9857.339ENSODEG00000009254-9956.277Octodon_degus
ENSELUG00000018459-10071.186ENSONIG00000012793u2af2a9973.305Oreochromis_niloticus
ENSELUG00000018459-10092.918ENSONIG00000009682-10092.918Oreochromis_niloticus
ENSELUG00000018459-10071.338ENSORLG00000011545u2af2a9972.921Oryzias_latipes
ENSELUG00000018459-10071.338ENSORLG00020006941u2af2a9972.921Oryzias_latipes_hni
ENSELUG00000018459-10071.338ENSORLG00015012843u2af2a9972.921Oryzias_latipes_hsok
ENSELUG00000018459-10074.627ENSOMEG00000011386u2af2a9973.987Oryzias_melastigma
ENSELUG00000018459-9849.111ENSOGAG00000034729-7954.856Otolemur_garnettii
ENSELUG00000018459-10070.886ENSOGAG00000007206-9974.684Otolemur_garnettii
ENSELUG00000018459-10067.568ENSOARG00000001091U2AF29967.715Ovis_aries
ENSELUG00000018459-10070.886ENSPPAG00000039782U2AF29974.684Pan_paniscus
ENSELUG00000018459-10070.886ENSPPRG00000013843U2AF29974.684Panthera_pardus
ENSELUG00000018459-9967.094ENSPTIG00000005489U2AF28675.063Panthera_tigris_altaica
ENSELUG00000018459-10070.886ENSPTRG00000011523U2AF29982.353Pan_troglodytes
ENSELUG00000018459-10071.489ENSPANG00000008459U2AF29975.319Papio_anubis
ENSELUG00000018459-10071.459ENSPKIG00000024346u2af2b9477.073Paramormyrops_kingsleyae
ENSELUG00000018459-10088.412ENSPKIG00000014878-10088.412Paramormyrops_kingsleyae
ENSELUG00000018459-8859.951ENSPSIG00000008014U2AF29955.280Pelodiscus_sinensis
ENSELUG00000018459-8572.821ENSPMGG00000022980u2af2a9171.220Periophthalmus_magnuspinnatus
ENSELUG00000018459-10070.886ENSPEMG00000007378U2af29982.353Peromyscus_maniculatus_bairdii
ENSELUG00000018459-8576.042ENSPMAG00000004097u2af2a10070.870Petromyzon_marinus
ENSELUG00000018459-10070.886ENSPCIG00000018013U2AF29974.684Phascolarctos_cinereus
ENSELUG00000018459-10074.043ENSPFOG00000010799u2af2a10074.043Poecilia_formosa
ENSELUG00000018459-10089.485ENSPFOG00000006433-10089.056Poecilia_formosa
ENSELUG00000018459-10074.043ENSPLAG00000014365u2af2a9974.043Poecilia_latipinna
ENSELUG00000018459-9488.991ENSPLAG00000003275-9888.222Poecilia_latipinna
ENSELUG00000018459-9488.991ENSPMEG00000003734-9888.222Poecilia_mexicana
ENSELUG00000018459-10074.043ENSPMEG00000002969u2af2a9974.043Poecilia_mexicana
ENSELUG00000018459-10074.043ENSPREG00000008739u2af2a9974.043Poecilia_reticulata
ENSELUG00000018459-10090.987ENSPREG00000013036-10090.411Poecilia_reticulata
ENSELUG00000018459-6080.657ENSPPYG00000010429-7780.657Pongo_abelii
ENSELUG00000018459-10056.842ENSPCAG00000014399-9960.632Procavia_capensis
ENSELUG00000018459-8871.501ENSPCAG00000003709-9671.501Procavia_capensis
ENSELUG00000018459-10070.886ENSPCOG00000025870U2AF29974.684Propithecus_coquereli
ENSELUG00000018459-10070.886ENSPVAG00000004540U2AF29974.684Pteropus_vampyrus
ENSELUG00000018459-10092.918ENSPNYG00000011605-10092.918Pundamilia_nyererei
ENSELUG00000018459-10074.043ENSPNYG00000001438u2af2a9974.043Pundamilia_nyererei
ENSELUG00000018459-10092.060ENSPNAG00000007182-10092.060Pygocentrus_nattereri
ENSELUG00000018459-10070.127ENSPNAG00000017620u2af2a9970.551Pygocentrus_nattereri
ENSELUG00000018459-10071.855ENSPNAG00000027289u2af2b9973.191Pygocentrus_nattereri
ENSELUG00000018459-10071.489ENSRNOG00000015914U2af29975.319Rattus_norvegicus
ENSELUG00000018459-10070.675ENSRBIG00000041018U2AF29974.473Rhinopithecus_bieti
ENSELUG00000018459-10068.298ENSRROG00000031238-9970.851Rhinopithecus_roxellana
ENSELUG00000018459-7879.887ENSRROG00000031103-10074.155Rhinopithecus_roxellana
ENSELUG00000018459-10071.489ENSSBOG00000023891U2AF29975.319Saimiri_boliviensis_boliviensis
ENSELUG00000018459-5469.611ENSSHAG00000001167U2AF26569.611Sarcophilus_harrisii
ENSELUG00000018459-8879.389ENSSFOG00015019182u2af2b8979.389Scleropages_formosus
ENSELUG00000018459-10088.841ENSSFOG00015003884-10088.841Scleropages_formosus
ENSELUG00000018459-10091.845ENSSMAG00000013779-10091.845Scophthalmus_maximus
ENSELUG00000018459-10072.269ENSSMAG00000012582u2af2a9973.404Scophthalmus_maximus
ENSELUG00000018459-9790.672ENSSDUG00000021434-9490.672Seriola_dumerili
ENSELUG00000018459-10073.830ENSSDUG00000009457u2af2a10073.830Seriola_dumerili
ENSELUG00000018459-10073.830ENSSLDG00000022742u2af2a9973.830Seriola_lalandi_dorsalis
ENSELUG00000018459-9790.672ENSSLDG00000016151-9990.672Seriola_lalandi_dorsalis
ENSELUG00000018459-10070.168ENSSPUG00000010229U2AF29972.074Sphenodon_punctatus
ENSELUG00000018459-10074.043ENSSPAG00000022519u2af2a9974.043Stegastes_partitus
ENSELUG00000018459-10092.918ENSSPAG00000005241-10092.918Stegastes_partitus
ENSELUG00000018459-10072.863ENSSSCG00000034815U2AF29975.319Sus_scrofa
ENSELUG00000018459-8579.733ENSTRUG00000005514u2af2a9872.406Takifugu_rubripes
ENSELUG00000018459-10072.436ENSTNIG00000008106U2AF29972.292Tetraodon_nigroviridis
ENSELUG00000018459-10084.797ENSTNIG00000011257-10084.615Tetraodon_nigroviridis
ENSELUG00000018459-7876.989ENSTBEG00000009104U2AF29676.989Tupaia_belangeri
ENSELUG00000018459-10070.886ENSTTRG00000000987U2AF29974.684Tursiops_truncatus
ENSELUG00000018459-8879.798ENSUAMG00000019883U2AF29971.795Ursus_americanus
ENSELUG00000018459-8879.798ENSUMAG00000024586U2AF29982.353Ursus_maritimus
ENSELUG00000018459-9774.449ENSVVUG00000006956U2AF26675.330Vulpes_vulpes
ENSELUG00000018459-10073.166ENSXETG00000019128u2af29973.640Xenopus_tropicalis
ENSELUG00000018459-8580.526ENSXCOG00000019406u2af2a9178.500Xiphophorus_couchianus
ENSELUG00000018459-10090.558ENSXMAG00000000768-9690.558Xiphophorus_maculatus
ENSELUG00000018459-10074.043ENSXMAG00000011979u2af2a9974.043Xiphophorus_maculatus

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