EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSELUG00000018516 (Gene tree)
Gene ID
105013346
Gene Symbol
rab5c
Alias
wu:fb98b08|wu:fi16g01
Full Name
RAB5C%2C member RAS oncogene family
Gene Type
protein_coding
Species
Esox_lucius
Status
putative
Strand
Plus strand
Length
28394 bases
Position
chrLG11:12668957-12697350
Accession
105013346
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSELUP00000019138MMR_HSR1PF01926.230.0001611
ENSELUP00000019194MMR_HSR1PF01926.230.0001611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSELUT00000040885-3124-ENSELUP00000019138217 (aa)-UPI0005773C70
ENSELUT00000029209-2858XM_010874808ENSELUP00000019194217 (aa)XP_010873110UPI0005773C70
Gene Model
Click here to download ENSELUG00000018516's gene model file
Pathways
Pathway IDPathway NameSource
els04144EndocytosisKEGG
els04145PhagosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000018516's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSELUG00000018516rab5c9044.103ENSELUG00000015413rab1ab9744.103
ENSELUG00000018516rab5c9039.196ENSELUG00000023247si:dkey-16l2.169537.688
ENSELUG00000018516rab5c7630.303ENSELUG00000008604rras28130.303
ENSELUG00000018516rab5c7531.902ENSELUG00000006480rheb8831.902
ENSELUG00000018516rab5c7643.529ENSELUG00000016682-8243.529
ENSELUG00000018516rab5c7742.857ENSELUG00000014785rab4a7644.099
ENSELUG00000018516rab5c5931.061ENSELUG00000010736arl8a6131.148
ENSELUG00000018516rab5c7440.994ENSELUG00000012801rab138140.994
ENSELUG00000018516rab5c7831.214ENSELUG00000013666si:cabz01085950.17234.247
ENSELUG00000018516rab5c7536.585ENSELUG00000010345rab42a7636.585
ENSELUG00000018516rab5c9042.564ENSELUG00000023815-9642.564
ENSELUG00000018516rab5c7440.994ENSELUG00000020012rab157640.994
ENSELUG00000018516rab5c7547.853ENSELUG00000002999rab11a8551.220
ENSELUG00000018516rab5c9984.259ENSELUG00000006462rab5aa9983.333
ENSELUG00000018516rab5c7534.211ENSELUG00000011352-7434.211
ENSELUG00000018516rab5c9983.333ENSELUG00000013436rab5ab9983.796
ENSELUG00000018516rab5c9043.077ENSELUG00000012428-9643.077
ENSELUG00000018516rab5c5430.328ENSELUG00000003770arl8a6130.328
ENSELUG00000018516rab5c8741.270ENSELUG00000013571-8741.270
ENSELUG00000018516rab5c7342.138ENSELUG00000023972rab357942.138
ENSELUG00000018516rab5c9240.488ENSELUG00000008876rab6a9639.500
ENSELUG00000018516rab5c7439.759ENSELUG00000013219rab33a6939.759
ENSELUG00000018516rab5c9141.414ENSELUG00000016450rab18b9641.414
ENSELUG00000018516rab5c8153.143ENSELUG00000015343rab22a8653.614
ENSELUG00000018516rab5c6836.486ENSELUG00000020788rab236837.500
ENSELUG00000018516rab5c7230.625ENSELUG00000022157rab34a6130.625
ENSELUG00000018516rab5c7846.552ENSELUG00000006604rab25a7748.485
ENSELUG00000018516rab5c7537.195ENSELUG00000005304rab39ba7737.195
ENSELUG00000018516rab5c7547.853ENSELUG00000021148rab11bb7547.853
ENSELUG00000018516rab5c7340.881ENSELUG00000023120-7440.881
ENSELUG00000018516rab5c9988.889ENSELUG00000010439-9888.889
ENSELUG00000018516rab5c7448.447ENSELUG00000020948-9050.427
ENSELUG00000018516rab5c7736.000ENSELUG00000004378rab9b8536.000
ENSELUG00000018516rab5c7249.682ENSELUG00000012035rab11al7349.682
ENSELUG00000018516rab5c7737.791ENSELUG00000007123rab127237.791
ENSELUG00000018516rab5c7638.462ENSELUG00000002575rab33ba7437.989
ENSELUG00000018516rab5c9732.558ENSELUG00000021199RAB9A9632.558
ENSELUG00000018516rab5c7231.250ENSELUG00000005597rab34b6231.250
ENSELUG00000018516rab5c7834.118ENSELUG00000018367rheb8933.333
ENSELUG00000018516rab5c9439.706ENSELUG00000022470rab6bb8343.023
ENSELUG00000018516rab5c7537.195ENSELUG00000013957-7737.195
ENSELUG00000018516rab5c8741.799ENSELUG00000009832rab148741.799
ENSELUG00000018516rab5c9140.909ENSELUG00000003805rab18a9640.201
ENSELUG00000018516rab5c7933.333ENSELUG00000018921rab366633.333
ENSELUG00000018516rab5c7932.584ENSELUG00000004712HRAS8731.928
ENSELUG00000018516rab5c9042.157ENSELUG00000012060rab25b7746.012
ENSELUG00000018516rab5c7742.857ENSELUG00000023964rab2a7644.099
ENSELUG00000018516rab5c7644.444ENSELUG00000000175zgc:1009188344.444
ENSELUG00000018516rab5c8143.784ENSELUG00000022997rab308146.626
ENSELUG00000018516rab5c7435.503ENSELUG00000016622rab9a8235.503
ENSELUG00000018516rab5c7547.853ENSELUG00000000916-8850.407
ENSELUG00000018516rab5c7339.623ENSELUG00000005989RAB157439.623
ENSELUG00000018516rab5c5431.967ENSELUG00000009390arl8ba6231.967
ENSELUG00000018516rab5c9044.162ENSELUG00000012166RAB1A7747.239
ENSELUG00000018516rab5c9439.024ENSELUG00000001257rab6ba8343.605
ENSELUG00000018516rab5c7643.529ENSELUG00000006539RAB7A8243.529
ENSELUG00000018516rab5c7547.853ENSELUG00000019240-8447.853
ENSELUG00000018516rab5c7633.133ENSELUG00000003058KRAS8832.738
ENSELUG00000018516rab5c7543.558ENSELUG00000011680zgc:1719277743.558
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSELUG00000018516rab5c9989.815ENSG00000108774RAB5C10095.968Homo_sapiens
ENSELUG00000018516rab5c9993.981ENSAPOG00000016864rab5c9893.981Acanthochromis_polyacanthus
ENSELUG00000018516rab5c9989.815ENSAMEG00000006003RAB5C9987.963Ailuropoda_melanoleuca
ENSELUG00000018516rab5c9994.907ENSACIG00000010896rab5c9894.907Amphilophus_citrinellus
ENSELUG00000018516rab5c9993.981ENSAOCG00000016614rab5c9893.981Amphiprion_ocellaris
ENSELUG00000018516rab5c9893.396ENSAPEG00000017868-9793.839Amphiprion_percula
ENSELUG00000018516rab5c9995.370ENSATEG00000001937rab5c9995.370Anabas_testudineus
ENSELUG00000018516rab5c9492.683ENSANAG00000025390RAB5C10090.244Aotus_nancymaae
ENSELUG00000018516rab5c9689.474ENSACLG00000008615-9988.128Astatotilapia_calliptera
ENSELUG00000018516rab5c9994.444ENSACLG00000002706rab5c9894.444Astatotilapia_calliptera
ENSELUG00000018516rab5c9995.392ENSAMXG00000043717rab5c9895.392Astyanax_mexicanus
ENSELUG00000018516rab5c9692.788ENSAMXG00000037267-9992.788Astyanax_mexicanus
ENSELUG00000018516rab5c9989.815ENSBTAG00000006982RAB5C9987.500Bos_taurus
ENSELUG00000018516rab5c9974.654WBGene00004268rab-58783.696Caenorhabditis_elegans
ENSELUG00000018516rab5c9989.815ENSCAFG00000015629RAB5C9987.963Canis_familiaris
ENSELUG00000018516rab5c9989.815ENSCAFG00020013537RAB5C9987.963Canis_lupus_dingo
ENSELUG00000018516rab5c9989.815ENSCHIG00000012960RAB5C9987.500Capra_hircus
ENSELUG00000018516rab5c9990.278ENSTSYG00000030531RAB5C9987.963Carlito_syrichta
ENSELUG00000018516rab5c9989.815ENSCCAG00000025940RAB5C9987.500Cebus_capucinus
ENSELUG00000018516rab5c9989.815ENSCATG00000040873RAB5C9987.963Cercocebus_atys
ENSELUG00000018516rab5c9990.278ENSCLAG00000016650RAB5C9987.963Chinchilla_lanigera
ENSELUG00000018516rab5c8295.506ENSCHOG00000009886RAB5C10095.506Choloepus_hoffmanni
ENSELUG00000018516rab5c9975.576ENSCING00000003340-9975.115Ciona_intestinalis
ENSELUG00000018516rab5c9976.126ENSCSAVG00000000613-9983.951Ciona_savignyi
ENSELUG00000018516rab5c9989.815ENSCGRG00001014226Rab5c9987.500Cricetulus_griseus_chok1gshd
ENSELUG00000018516rab5c9989.815ENSCGRG00000007534Rab5c9987.500Cricetulus_griseus_crigri
ENSELUG00000018516rab5c9993.519ENSCSEG00000017024rab5c9893.519Cynoglossus_semilaevis
ENSELUG00000018516rab5c9993.981ENSCVAG00000009550rab5c9893.981Cyprinodon_variegatus
ENSELUG00000018516rab5c9989.815ENSDNOG00000038853RAB5C9987.037Dasypus_novemcinctus
ENSELUG00000018516rab5c9990.741ENSDORG00000006819Rab5c9988.426Dipodomys_ordii
ENSELUG00000018516rab5c9078.462FBgn0014010Rab58481.081Drosophila_melanogaster
ENSELUG00000018516rab5c8686.022ENSEBUG00000014794rab5c8886.022Eptatretus_burgeri
ENSELUG00000018516rab5c9989.815ENSEASG00005009281RAB5C9987.963Equus_asinus_asinus
ENSELUG00000018516rab5c9990.278ENSECAG00000025054RAB5C9987.963Equus_caballus
ENSELUG00000018516rab5c9989.815ENSEEUG00000002790RAB5C9987.500Erinaceus_europaeus
ENSELUG00000018516rab5c9989.815ENSFCAG00000002148RAB5C9987.500Felis_catus
ENSELUG00000018516rab5c9989.352ENSFDAG00000021541RAB5C9987.500Fukomys_damarensis
ENSELUG00000018516rab5c9994.444ENSFHEG00000012117rab5c9894.444Fundulus_heteroclitus
ENSELUG00000018516rab5c9988.940ENSFHEG00000015268-9988.940Fundulus_heteroclitus
ENSELUG00000018516rab5c7788.095ENSGMOG00000001876-9788.095Gadus_morhua
ENSELUG00000018516rab5c9993.519ENSGMOG00000015096rab5c9893.519Gadus_morhua
ENSELUG00000018516rab5c9994.444ENSGAFG00000000884rab5c9894.444Gambusia_affinis
ENSELUG00000018516rab5c9690.909ENSGAFG00000003642-9988.636Gambusia_affinis
ENSELUG00000018516rab5c9991.667ENSGACG00000008659rab5c9891.667Gasterosteus_aculeatus
ENSELUG00000018516rab5c9989.815ENSGGOG00000005472RAB5C9987.963Gorilla_gorilla
ENSELUG00000018516rab5c9994.444ENSHBUG00000002014rab5c9894.444Haplochromis_burtoni
ENSELUG00000018516rab5c9689.474ENSHBUG00000006823-9988.128Haplochromis_burtoni
ENSELUG00000018516rab5c9988.889ENSHGLG00000012067RAB5C9987.037Heterocephalus_glaber_female
ENSELUG00000018516rab5c9781.517ENSHCOG00000020238-9980.909Hippocampus_comes
ENSELUG00000018516rab5c9995.392ENSHCOG00000004662rab5c9795.392Hippocampus_comes
ENSELUG00000018516rab5c9293.970ENSIPUG00000020082rab5c9892.202Ictalurus_punctatus
ENSELUG00000018516rab5c9989.352ENSSTOG00000006620RAB5C9987.500Ictidomys_tridecemlineatus
ENSELUG00000018516rab5c9990.278ENSJJAG00000021181Rab5c9987.500Jaculus_jaculus
ENSELUG00000018516rab5c9994.907ENSKMAG00000020038rab5c9894.907Kryptolebias_marmoratus
ENSELUG00000018516rab5c9989.862ENSKMAG00000017417-9989.862Kryptolebias_marmoratus
ENSELUG00000018516rab5c9996.759ENSLBEG00000004128rab5c9896.759Labrus_bergylta
ENSELUG00000018516rab5c9991.244ENSLBEG00000010408-9891.244Labrus_bergylta
ENSELUG00000018516rab5c9991.204ENSLOCG00000012566rab5c10089.815Lepisosteus_oculatus
ENSELUG00000018516rab5c9989.815ENSMFAG00000039627RAB5C9987.963Macaca_fascicularis
ENSELUG00000018516rab5c9989.815ENSMNEG00000000355RAB5C9987.963Macaca_nemestrina
ENSELUG00000018516rab5c9990.783ENSMAMG00000016207-9990.783Mastacembelus_armatus
ENSELUG00000018516rab5c9994.907ENSMAMG00000022322rab5c9894.907Mastacembelus_armatus
ENSELUG00000018516rab5c9994.444ENSMZEG00005022735rab5c9894.444Maylandia_zebra
ENSELUG00000018516rab5c9689.474ENSMZEG00005021090-9988.128Maylandia_zebra
ENSELUG00000018516rab5c9990.278ENSMAUG00000015005Rab5c9987.963Mesocricetus_auratus
ENSELUG00000018516rab5c9990.278ENSMICG00000041608RAB5C9987.963Microcebus_murinus
ENSELUG00000018516rab5c9990.278ENSMOCG00000018531-9987.500Microtus_ochrogaster
ENSELUG00000018516rab5c9993.519ENSMMOG00000020621rab5c9893.519Mola_mola
ENSELUG00000018516rab5c9988.479ENSMALG00000022348-9988.479Monopterus_albus
ENSELUG00000018516rab5c9788.152ENSMALG00000006052rab5c9688.372Monopterus_albus
ENSELUG00000018516rab5c9990.278MGP_CAROLIEiJ_G0017184Rab5c9987.963Mus_caroli
ENSELUG00000018516rab5c9990.278ENSMUSG00000019173Rab5c9987.963Mus_musculus
ENSELUG00000018516rab5c9990.278MGP_PahariEiJ_G0018314Rab5c9987.963Mus_pahari
ENSELUG00000018516rab5c9990.278MGP_SPRETEiJ_G0018027Rab5c9987.963Mus_spretus
ENSELUG00000018516rab5c9989.815ENSMPUG00000010554RAB5C9987.963Mustela_putorius_furo
ENSELUG00000018516rab5c9989.815ENSNGAG00000010286Rab5c9987.500Nannospalax_galili
ENSELUG00000018516rab5c9689.474ENSNBRG00000016922-9988.128Neolamprologus_brichardi
ENSELUG00000018516rab5c9994.907ENSNBRG00000018165rab5c9894.907Neolamprologus_brichardi
ENSELUG00000018516rab5c8288.764ENSOPRG00000008255RAB5C10088.764Ochotona_princeps
ENSELUG00000018516rab5c9989.815ENSODEG00000017920RAB5C9987.500Octodon_degus
ENSELUG00000018516rab5c9994.444ENSONIG00000001113rab5c9894.444Oreochromis_niloticus
ENSELUG00000018516rab5c9993.981ENSORLG00000003882rab5c9993.981Oryzias_latipes
ENSELUG00000018516rab5c9993.519ENSORLG00020008388rab5c9993.519Oryzias_latipes_hni
ENSELUG00000018516rab5c9993.981ENSORLG00015021900rab5c9993.981Oryzias_latipes_hsok
ENSELUG00000018516rab5c9993.981ENSOMEG00000023078rab5c9993.981Oryzias_melastigma
ENSELUG00000018516rab5c9990.278ENSOGAG00000009456RAB5C9987.963Otolemur_garnettii
ENSELUG00000018516rab5c9989.815ENSOARG00000018768RAB5C9987.500Ovis_aries
ENSELUG00000018516rab5c9989.815ENSPPAG00000037206RAB5C9987.963Pan_paniscus
ENSELUG00000018516rab5c9989.815ENSPPRG00000005745RAB5C9987.500Panthera_pardus
ENSELUG00000018516rab5c9989.815ENSPTIG00000008177RAB5C9987.500Panthera_tigris_altaica
ENSELUG00000018516rab5c9989.815ENSPTRG00000009194RAB5C9987.963Pan_troglodytes
ENSELUG00000018516rab5c9987.500ENSPKIG00000001237-9987.500Paramormyrops_kingsleyae
ENSELUG00000018516rab5c9987.963ENSPKIG00000020112-9987.963Paramormyrops_kingsleyae
ENSELUG00000018516rab5c9991.204ENSPMGG00000010792rab5c9792.891Periophthalmus_magnuspinnatus
ENSELUG00000018516rab5c9990.278ENSPEMG00000017971Rab5c9987.500Peromyscus_maniculatus_bairdii
ENSELUG00000018516rab5c8785.052ENSPMAG00000000008rab5c8885.417Petromyzon_marinus
ENSELUG00000018516rab5c8980.203ENSPMAG00000007867rab5c8883.333Petromyzon_marinus
ENSELUG00000018516rab5c9976.852ENSPMAG00000001399rab5c9976.852Petromyzon_marinus
ENSELUG00000018516rab5c9989.815ENSPCIG00000020225-9987.963Phascolarctos_cinereus
ENSELUG00000018516rab5c9994.444ENSPLAG00000004790rab5c9894.444Poecilia_latipinna
ENSELUG00000018516rab5c9989.401ENSPLAG00000016333-9989.401Poecilia_latipinna
ENSELUG00000018516rab5c9994.444ENSPMEG00000011336rab5c9894.444Poecilia_mexicana
ENSELUG00000018516rab5c9790.995ENSPMEG00000012614-9889.498Poecilia_mexicana
ENSELUG00000018516rab5c9994.444ENSPREG00000010146rab5c9894.444Poecilia_reticulata
ENSELUG00000018516rab5c8593.548ENSPREG00000022167-8993.989Poecilia_reticulata
ENSELUG00000018516rab5c9989.815ENSPPYG00000008398RAB5C9987.963Pongo_abelii
ENSELUG00000018516rab5c9988.889ENSPCAG00000016412RAB5C9986.574Procavia_capensis
ENSELUG00000018516rab5c9989.352ENSPCOG00000026327RAB5C9987.963Propithecus_coquereli
ENSELUG00000018516rab5c9990.278ENSPVAG00000003867RAB5C9987.963Pteropus_vampyrus
ENSELUG00000018516rab5c9689.474ENSPNYG00000015851-9988.128Pundamilia_nyererei
ENSELUG00000018516rab5c9994.444ENSPNYG00000010615rab5c9894.444Pundamilia_nyererei
ENSELUG00000018516rab5c9994.931ENSPNAG00000028138rab5c9894.931Pygocentrus_nattereri
ENSELUG00000018516rab5c9690.385ENSPNAG00000002218-9890.385Pygocentrus_nattereri
ENSELUG00000018516rab5c9990.278ENSRNOG00000018568Rab5c9987.963Rattus_norvegicus
ENSELUG00000018516rab5c9989.815ENSRBIG00000031376RAB5C9987.963Rhinopithecus_bieti
ENSELUG00000018516rab5c9989.815ENSRROG00000032895RAB5C9987.963Rhinopithecus_roxellana
ENSELUG00000018516rab5c9989.815ENSSBOG00000032552-9987.500Saimiri_boliviensis_boliviensis
ENSELUG00000018516rab5c9990.278ENSSHAG00000005267-9988.426Sarcophilus_harrisii
ENSELUG00000018516rab5c9985.648ENSSFOG00015009988-9885.648Scleropages_formosus
ENSELUG00000018516rab5c9696.172ENSSMAG00000007323rab5c9895.833Scophthalmus_maximus
ENSELUG00000018516rab5c9994.907ENSSDUG00000023008rab5c9894.907Seriola_dumerili
ENSELUG00000018516rab5c9993.981ENSSLDG00000017771rab5c9893.981Seriola_lalandi_dorsalis
ENSELUG00000018516rab5c9989.815ENSSPUG00000012950-9987.963Sphenodon_punctatus
ENSELUG00000018516rab5c9995.833ENSSPAG00000006436rab5c9895.833Stegastes_partitus
ENSELUG00000018516rab5c9989.815ENSSSCG00000032467RAB5C9987.500Sus_scrofa
ENSELUG00000018516rab5c9993.981ENSTRUG00000015590rab5c9893.981Takifugu_rubripes
ENSELUG00000018516rab5c9694.737ENSTNIG00000011711rab5c9594.737Tetraodon_nigroviridis
ENSELUG00000018516rab5c9989.815ENSTBEG00000007092RAB5C9987.963Tupaia_belangeri
ENSELUG00000018516rab5c9989.352ENSTTRG00000006673RAB5C9987.037Tursiops_truncatus
ENSELUG00000018516rab5c9989.815ENSUAMG00000024343RAB5C9987.963Ursus_americanus
ENSELUG00000018516rab5c9989.815ENSUMAG00000023270RAB5C9987.963Ursus_maritimus
ENSELUG00000018516rab5c9691.388ENSXCOG00000006300-9989.091Xiphophorus_couchianus
ENSELUG00000018516rab5c9994.444ENSXCOG00000016788rab5c9894.444Xiphophorus_couchianus
ENSELUG00000018516rab5c9989.401ENSXMAG00000022179-9989.401Xiphophorus_maculatus
ENSELUG00000018516rab5c9994.444ENSXMAG00000003266rab5c9894.444Xiphophorus_maculatus

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