EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000018535 (Gene tree)
Gene ID: 105014621
Gene Symbol: smarcad1a
Alias: smarcad1|wu:fi25c01|zgc:113183
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 14653 bases
Position: chrLG13:29922597-29937249
Accession: 105014621
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000019166	ResIII	PF04851.15	9.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000029245	-	5011	XM_010877081	ENSELUP00000019166	1017 (aa)	XP_010875383	UPI00057621AB

Gene Model

Click here to download ENSELUG00000018535's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000018535's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000018535	smarcad1a	84	62.399	ENSELUG00000019154	smarcad1b	86	60.923
ENSELUG00000018535	smarcad1a	53	33.919	ENSELUG00000014909	hells	66	34.079

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000018535	smarcad1a	100	51.344	ENSG00000163104	SMARCAD1	99	67.172	Homo_sapiens
ENSELUG00000018535	smarcad1a	100	67.131	ENSAPOG00000011446	smarcad1a	100	67.468	Acanthochromis_polyacanthus
ENSELUG00000018535	smarcad1a	100	50.788	ENSAMEG00000005844	SMARCAD1	100	51.625	Ailuropoda_melanoleuca
ENSELUG00000018535	smarcad1a	69	80.149	ENSACIG00000018326	smarcad1a	94	80.714	Amphilophus_citrinellus
ENSELUG00000018535	smarcad1a	100	68.056	ENSAOCG00000019762	smarcad1a	100	69.004	Amphiprion_ocellaris
ENSELUG00000018535	smarcad1a	100	68.148	ENSAPEG00000003889	smarcad1a	100	68.911	Amphiprion_percula
ENSELUG00000018535	smarcad1a	95	66.148	ENSATEG00000015608	smarcad1a	99	66.764	Anabas_testudineus
ENSELUG00000018535	smarcad1a	90	54.674	ENSAPLG00000004630	SMARCAD1	91	54.565	Anas_platyrhynchos
ENSELUG00000018535	smarcad1a	100	49.488	ENSACAG00000013554	SMARCAD1	100	49.860	Anolis_carolinensis
ENSELUG00000018535	smarcad1a	100	51.993	ENSANAG00000020488	SMARCAD1	98	55.720	Aotus_nancymaae
ENSELUG00000018535	smarcad1a	100	67.085	ENSACLG00000017063	smarcad1a	100	67.213	Astatotilapia_calliptera
ENSELUG00000018535	smarcad1a	68	70.959	ENSAMXG00000015470	smarcad1a	94	72.633	Astyanax_mexicanus
ENSELUG00000018535	smarcad1a	83	66.942	ENSAMXG00000019130	smarcad1b	87	66.352	Astyanax_mexicanus
ENSELUG00000018535	smarcad1a	100	51.574	ENSBTAG00000017061	SMARCAD1	100	52.271	Bos_taurus
ENSELUG00000018535	smarcad1a	61	42.205	WBGene00010845	M03C11.8	68	40.379	Caenorhabditis_elegans
ENSELUG00000018535	smarcad1a	100	51.944	ENSCJAG00000006778	SMARCAD1	100	52.085	Callithrix_jacchus
ENSELUG00000018535	smarcad1a	100	51.022	ENSCAFG00000010026	SMARCAD1	100	51.721	Canis_familiaris
ENSELUG00000018535	smarcad1a	91	55.603	ENSCAFG00020003994	SMARCAD1	99	56.410	Canis_lupus_dingo
ENSELUG00000018535	smarcad1a	100	51.437	ENSCHIG00000012905	SMARCAD1	100	52.134	Capra_hircus
ENSELUG00000018535	smarcad1a	100	51.341	ENSTSYG00000002706	SMARCAD1	100	51.664	Carlito_syrichta
ENSELUG00000018535	smarcad1a	86	49.149	ENSCAPG00000016744	SMARCAD1	91	50.170	Cavia_aperea
ENSELUG00000018535	smarcad1a	100	50.738	ENSCPOG00000011398	SMARCAD1	100	51.292	Cavia_porcellus
ENSELUG00000018535	smarcad1a	100	51.811	ENSCCAG00000022264	SMARCAD1	99	67.340	Cebus_capucinus
ENSELUG00000018535	smarcad1a	100	51.253	ENSCATG00000035663	SMARCAD1	99	56.043	Cercocebus_atys
ENSELUG00000018535	smarcad1a	86	55.843	ENSCSAG00000004186	SMARCAD1	100	56.644	Chlorocebus_sabaeus
ENSELUG00000018535	smarcad1a	100	50.647	ENSCPBG00000013203	SMARCAD1	100	50.785	Chrysemys_picta_bellii
ENSELUG00000018535	smarcad1a	64	48.722	ENSCING00000001688	-	98	48.722	Ciona_intestinalis
ENSELUG00000018535	smarcad1a	100	51.161	ENSCANG00000003556	SMARCAD1	99	67.172	Colobus_angolensis_palliatus
ENSELUG00000018535	smarcad1a	100	50.838	ENSCGRG00001015056	Smarcad1	100	50.977	Cricetulus_griseus_chok1gshd
ENSELUG00000018535	smarcad1a	100	50.838	ENSCGRG00000014087	Smarcad1	100	50.977	Cricetulus_griseus_crigri
ENSELUG00000018535	smarcad1a	100	62.804	ENSCSEG00000014419	-	100	62.114	Cynoglossus_semilaevis
ENSELUG00000018535	smarcad1a	100	61.803	ENSCSEG00000017903	smarcad1a	100	62.361	Cynoglossus_semilaevis
ENSELUG00000018535	smarcad1a	100	60.155	ENSDARG00000014041	smarcad1a	100	60.427	Danio_rerio
ENSELUG00000018535	smarcad1a	100	50.601	ENSDNOG00000000806	-	100	51.346	Dasypus_novemcinctus
ENSELUG00000018535	smarcad1a	100	52.425	ENSDORG00000012331	Smarcad1	100	52.425	Dipodomys_ordii
ENSELUG00000018535	smarcad1a	62	45.271	FBgn0032157	Etl1	79	44.478	Drosophila_melanogaster
ENSELUG00000018535	smarcad1a	62	47.500	ENSEBUG00000003969	smarcad1a	97	47.840	Eptatretus_burgeri
ENSELUG00000018535	smarcad1a	100	51.344	ENSEASG00005012382	SMARCAD1	100	52.041	Equus_asinus_asinus
ENSELUG00000018535	smarcad1a	100	51.344	ENSECAG00000011562	SMARCAD1	100	52.041	Equus_caballus
ENSELUG00000018535	smarcad1a	100	50.975	ENSFCAG00000003958	SMARCAD1	99	67.340	Felis_catus
ENSELUG00000018535	smarcad1a	100	51.097	ENSFALG00000006089	SMARCAD1	100	51.111	Ficedula_albicollis
ENSELUG00000018535	smarcad1a	100	51.301	ENSFDAG00000017027	SMARCAD1	100	51.301	Fukomys_damarensis
ENSELUG00000018535	smarcad1a	91	76.339	ENSFHEG00000012778	smarcad1a	100	60.778	Fundulus_heteroclitus
ENSELUG00000018535	smarcad1a	88	69.934	ENSGMOG00000018995	smarcad1a	97	70.264	Gadus_morhua
ENSELUG00000018535	smarcad1a	91	53.132	ENSGALG00000037339	SMARCAD1	99	52.960	Gallus_gallus
ENSELUG00000018535	smarcad1a	69	74.678	ENSGAFG00000013498	smarcad1a	100	61.028	Gambusia_affinis
ENSELUG00000018535	smarcad1a	91	68.534	ENSGACG00000007327	smarcad1a	99	68.138	Gasterosteus_aculeatus
ENSELUG00000018535	smarcad1a	100	50.788	ENSGAGG00000008582	SMARCAD1	100	51.204	Gopherus_agassizii
ENSELUG00000018535	smarcad1a	100	51.253	ENSGGOG00000023001	SMARCAD1	100	51.859	Gorilla_gorilla
ENSELUG00000018535	smarcad1a	100	65.356	ENSHBUG00000011042	smarcad1a	100	65.856	Haplochromis_burtoni
ENSELUG00000018535	smarcad1a	100	51.204	ENSHGLG00000005070	SMARCAD1	100	51.204	Heterocephalus_glaber_female
ENSELUG00000018535	smarcad1a	100	51.204	ENSHGLG00100006812	SMARCAD1	100	51.204	Heterocephalus_glaber_male
ENSELUG00000018535	smarcad1a	100	56.328	ENSHCOG00000007848	smarcad1a	100	57.296	Hippocampus_comes
ENSELUG00000018535	smarcad1a	85	64.138	ENSIPUG00000022817	smarcad1b	89	64.253	Ictalurus_punctatus
ENSELUG00000018535	smarcad1a	99	58.286	ENSIPUG00000000242	smarcad1a	95	63.636	Ictalurus_punctatus
ENSELUG00000018535	smarcad1a	100	50.928	ENSSTOG00000001227	SMARCAD1	100	51.251	Ictidomys_tridecemlineatus
ENSELUG00000018535	smarcad1a	100	50.882	ENSJJAG00000022342	Smarcad1	100	51.066	Jaculus_jaculus
ENSELUG00000018535	smarcad1a	91	77.729	ENSKMAG00000021351	smarcad1a	99	63.286	Kryptolebias_marmoratus
ENSELUG00000018535	smarcad1a	100	65.169	ENSLBEG00000008088	smarcad1a	99	65.945	Labrus_bergylta
ENSELUG00000018535	smarcad1a	100	58.716	ENSLOCG00000012909	smarcad1a	100	60.907	Lepisosteus_oculatus
ENSELUG00000018535	smarcad1a	100	50.139	ENSLAFG00000000040	SMARCAD1	100	50.368	Loxodonta_africana
ENSELUG00000018535	smarcad1a	100	50.975	ENSMFAG00000042606	SMARCAD1	99	55.936	Macaca_fascicularis
ENSELUG00000018535	smarcad1a	91	55.176	ENSMMUG00000022242	SMARCAD1	99	55.936	Macaca_mulatta
ENSELUG00000018535	smarcad1a	100	50.975	ENSMNEG00000038117	SMARCAD1	99	67.172	Macaca_nemestrina
ENSELUG00000018535	smarcad1a	100	51.346	ENSMLEG00000038333	SMARCAD1	99	67.172	Mandrillus_leucophaeus
ENSELUG00000018535	smarcad1a	70	79.635	ENSMAMG00000000933	smarcad1a	100	68.178	Mastacembelus_armatus
ENSELUG00000018535	smarcad1a	100	66.988	ENSMZEG00005005203	smarcad1a	100	67.117	Maylandia_zebra
ENSELUG00000018535	smarcad1a	97	51.043	ENSMGAG00000005577	SMARCAD1	97	50.943	Meleagris_gallopavo
ENSELUG00000018535	smarcad1a	100	51.299	ENSMAUG00000008417	Smarcad1	100	51.299	Mesocricetus_auratus
ENSELUG00000018535	smarcad1a	100	51.242	ENSMICG00000009746	SMARCAD1	100	51.284	Microcebus_murinus
ENSELUG00000018535	smarcad1a	100	50.931	ENSMOCG00000017142	Smarcad1	100	51.115	Microtus_ochrogaster
ENSELUG00000018535	smarcad1a	71	78.815	ENSMMOG00000000275	smarcad1a	99	78.815	Mola_mola
ENSELUG00000018535	smarcad1a	100	51.068	ENSMODG00000019268	SMARCAD1	100	51.022	Monodelphis_domestica
ENSELUG00000018535	smarcad1a	87	55.804	MGP_CAROLIEiJ_G0028458	-	67	55.804	Mus_caroli
ENSELUG00000018535	smarcad1a	100	50.140	ENSMUSG00000029920	Smarcad1	100	50.512	Mus_musculus
ENSELUG00000018535	smarcad1a	100	50.419	MGP_PahariEiJ_G0022198	Smarcad1	100	50.838	Mus_pahari
ENSELUG00000018535	smarcad1a	100	50.140	MGP_SPRETEiJ_G0029462	Smarcad1	100	50.512	Mus_spretus
ENSELUG00000018535	smarcad1a	100	50.880	ENSMPUG00000002111	SMARCAD1	100	51.577	Mustela_putorius_furo
ENSELUG00000018535	smarcad1a	100	52.306	ENSMLUG00000000425	SMARCAD1	100	52.030	Myotis_lucifugus
ENSELUG00000018535	smarcad1a	100	50.982	ENSNGAG00000000810	Smarcad1	100	51.493	Nannospalax_galili
ENSELUG00000018535	smarcad1a	67	79.472	ENSNBRG00000012749	smarcad1a	86	76.495	Neolamprologus_brichardi
ENSELUG00000018535	smarcad1a	100	51.253	ENSNLEG00000014225	SMARCAD1	99	67.172	Nomascus_leucogenys
ENSELUG00000018535	smarcad1a	100	51.244	ENSODEG00000004334	SMARCAD1	100	51.244	Octodon_degus
ENSELUG00000018535	smarcad1a	87	81.747	ENSONIG00000015059	smarcad1a	100	65.116	Oreochromis_niloticus
ENSELUG00000018535	smarcad1a	83	58.333	ENSOANG00000013764	SMARCAD1	99	58.142	Ornithorhynchus_anatinus
ENSELUG00000018535	smarcad1a	100	51.251	ENSOCUG00000017283	SMARCAD1	100	51.481	Oryctolagus_cuniculus
ENSELUG00000018535	smarcad1a	100	63.933	ENSORLG00000004869	smarcad1a	100	63.933	Oryzias_latipes
ENSELUG00000018535	smarcad1a	100	63.679	ENSORLG00020020569	smarcad1a	100	63.679	Oryzias_latipes_hni
ENSELUG00000018535	smarcad1a	100	64.212	ENSORLG00015009045	smarcad1a	100	64.212	Oryzias_latipes_hsok
ENSELUG00000018535	smarcad1a	99	64.279	ENSOMEG00000023032	smarcad1a	100	64.279	Oryzias_melastigma
ENSELUG00000018535	smarcad1a	100	50.788	ENSOGAG00000011444	SMARCAD1	100	50.832	Otolemur_garnettii
ENSELUG00000018535	smarcad1a	100	51.437	ENSOARG00000017851	SMARCAD1	100	52.134	Ovis_aries
ENSELUG00000018535	smarcad1a	100	51.068	ENSPPAG00000035715	SMARCAD1	100	51.673	Pan_paniscus
ENSELUG00000018535	smarcad1a	100	50.975	ENSPPRG00000024756	SMARCAD1	99	67.340	Panthera_pardus
ENSELUG00000018535	smarcad1a	100	51.066	ENSPTIG00000017868	SMARCAD1	100	51.294	Panthera_tigris_altaica
ENSELUG00000018535	smarcad1a	100	51.253	ENSPTRG00000023126	SMARCAD1	99	67.172	Pan_troglodytes
ENSELUG00000018535	smarcad1a	100	50.278	ENSPANG00000019757	SMARCAD1	100	50.880	Papio_anubis
ENSELUG00000018535	smarcad1a	100	51.064	ENSPSIG00000010255	SMARCAD1	100	50.923	Pelodiscus_sinensis
ENSELUG00000018535	smarcad1a	63	72.798	ENSPMGG00000010735	smarcad1a	95	71.833	Periophthalmus_magnuspinnatus
ENSELUG00000018535	smarcad1a	100	45.222	ENSPEMG00000001854	Smarcad1	100	45.739	Peromyscus_maniculatus_bairdii
ENSELUG00000018535	smarcad1a	89	50.651	ENSPMAG00000003516	smarcad1a	99	46.466	Petromyzon_marinus
ENSELUG00000018535	smarcad1a	81	58.724	ENSPCIG00000008137	SMARCAD1	98	58.862	Phascolarctos_cinereus
ENSELUG00000018535	smarcad1a	100	62.759	ENSPFOG00000019116	smarcad1a	100	63.333	Poecilia_formosa
ENSELUG00000018535	smarcad1a	100	62.579	ENSPLAG00000000108	smarcad1a	100	63.243	Poecilia_latipinna
ENSELUG00000018535	smarcad1a	100	62.669	ENSPMEG00000009155	smarcad1a	100	63.243	Poecilia_mexicana
ENSELUG00000018535	smarcad1a	100	64.981	ENSPREG00000018185	smarcad1a	100	65.356	Poecilia_reticulata
ENSELUG00000018535	smarcad1a	100	51.391	ENSPPYG00000014935	SMARCAD1	100	51.996	Pongo_abelii
ENSELUG00000018535	smarcad1a	69	53.305	ENSPCOG00000020478	SMARCAD1	75	55.193	Propithecus_coquereli
ENSELUG00000018535	smarcad1a	100	50.186	ENSPVAG00000001760	SMARCAD1	100	50.602	Pteropus_vampyrus
ENSELUG00000018535	smarcad1a	67	79.179	ENSPNYG00000010087	smarcad1a	86	76.356	Pundamilia_nyererei
ENSELUG00000018535	smarcad1a	85	66.086	ENSPNAG00000010099	smarcad1b	88	66.357	Pygocentrus_nattereri
ENSELUG00000018535	smarcad1a	100	61.366	ENSPNAG00000001663	smarcad1a	100	61.366	Pygocentrus_nattereri
ENSELUG00000018535	smarcad1a	100	50.509	ENSRNOG00000006391	Smarcad1	100	50.509	Rattus_norvegicus
ENSELUG00000018535	smarcad1a	100	51.161	ENSRBIG00000041989	SMARCAD1	100	51.766	Rhinopithecus_bieti
ENSELUG00000018535	smarcad1a	100	51.161	ENSRROG00000035309	SMARCAD1	100	51.766	Rhinopithecus_roxellana
ENSELUG00000018535	smarcad1a	100	51.625	ENSSBOG00000032114	SMARCAD1	99	67.340	Saimiri_boliviensis_boliviensis
ENSELUG00000018535	smarcad1a	100	50.975	ENSSHAG00000001279	SMARCAD1	100	51.161	Sarcophilus_harrisii
ENSELUG00000018535	smarcad1a	100	62.333	ENSSFOG00015016814	smarcad1b	100	62.188	Scleropages_formosus
ENSELUG00000018535	smarcad1a	79	66.339	ENSSFOG00015020909	smarcad1a	100	65.848	Scleropages_formosus
ENSELUG00000018535	smarcad1a	69	80.143	ENSSMAG00000001326	smarcad1a	100	65.688	Scophthalmus_maximus
ENSELUG00000018535	smarcad1a	69	80.429	ENSSDUG00000022338	smarcad1a	89	76.463	Seriola_dumerili
ENSELUG00000018535	smarcad1a	93	79.256	ENSSLDG00000024986	smarcad1a	100	65.129	Seriola_lalandi_dorsalis
ENSELUG00000018535	smarcad1a	58	67.395	ENSSPUG00000004633	SMARCAD1	99	67.395	Sphenodon_punctatus
ENSELUG00000018535	smarcad1a	100	67.068	ENSSPAG00000001970	smarcad1a	100	67.160	Stegastes_partitus
ENSELUG00000018535	smarcad1a	100	51.437	ENSSSCG00000009193	SMARCAD1	100	56.854	Sus_scrofa
ENSELUG00000018535	smarcad1a	81	57.863	ENSTGUG00000003127	SMARCAD1	100	58.845	Taeniopygia_guttata
ENSELUG00000018535	smarcad1a	90	69.466	ENSTNIG00000017585	smarcad1a	99	70.153	Tetraodon_nigroviridis
ENSELUG00000018535	smarcad1a	83	70.040	ENSTBEG00000002789	SMARCAD1	85	70.040	Tupaia_belangeri
ENSELUG00000018535	smarcad1a	98	52.724	ENSTTRG00000000226	SMARCAD1	97	53.262	Tursiops_truncatus
ENSELUG00000018535	smarcad1a	100	50.788	ENSUAMG00000022262	SMARCAD1	100	51.625	Ursus_americanus
ENSELUG00000018535	smarcad1a	100	50.835	ENSUMAG00000004549	SMARCAD1	100	51.673	Ursus_maritimus
ENSELUG00000018535	smarcad1a	100	50.836	ENSVVUG00000007271	SMARCAD1	100	56.742	Vulpes_vulpes
ENSELUG00000018535	smarcad1a	89	52.236	ENSXETG00000019214	smarcad1	100	51.908	Xenopus_tropicalis
ENSELUG00000018535	smarcad1a	80	68.627	ENSXCOG00000005232	smarcad1a	85	76.982	Xiphophorus_couchianus
ENSELUG00000018535	smarcad1a	95	77.396	ENSXMAG00000015350	smarcad1a	100	63.002	Xiphophorus_maculatus