EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000018609 (Gene tree)
Gene ID: 105021751
Gene Symbol: -
Alias: -
Full Name: la-related protein 6-like
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 3481 bases
Position: chrLG14:27128374-27131854
Accession: 105021751
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000038682	La	PF05383.17	2.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000029362	-	2949	XM_010889635	ENSELUP00000038682	441 (aa)	XP_010887937	UPI000576448B

Gene Model

Click here to download ENSELUG00000018609's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000018609's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000018609	-	94	36.034	ENSELUG00000021677	larp6b	91	34.194
ENSELUG00000018609	-	87	40.802	ENSELUG00000007341	larp6a	61	39.535

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000018609	-	87	39.303	ENSAPLG00000004633	-	95	38.250	Anas_platyrhynchos
ENSELUG00000018609	-	86	38.038	ENSACAG00000016739	-	97	38.235	Anolis_carolinensis
ENSELUG00000018609	-	91	40.183	ENSCPBG00000011144	-	91	40.632	Chrysemys_picta_bellii
ENSELUG00000018609	-	90	39.498	ENSGAGG00000005511	-	96	39.636	Gopherus_agassizii
ENSELUG00000018609	-	95	36.929	ENSLACG00000014893	-	92	38.445	Latimeria_chalumnae
ENSELUG00000018609	-	87	36.317	ENSMGAG00000001563	-	53	47.034	Meleagris_gallopavo
ENSELUG00000018609	-	52	41.880	ENSPCIG00000009484	-	63	41.880	Phascolarctos_cinereus
ENSELUG00000018609	-	90	60.741	ENSPNAG00000008072	-	93	60.741	Pygocentrus_nattereri
ENSELUG00000018609	-	85	39.659	ENSXETG00000021887	larp6-like.1	82	39.659	Xenopus_tropicalis