EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000018728 (Gene tree)
Gene ID: 105017898
Gene Symbol: -
Alias: -
Full Name: zinc finger CCCH-type containing 12D
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 11414 bases
Position: chrLG18:16735086-16746499
Accession: 105017898
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000038781	RNase_Zc3h12a	PF11977.8	2e-62	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000029528	-	4823	XM_010882889	ENSELUP00000038781	639 (aa)	XP_010881191	-

Gene Model

Click here to download ENSELUG00000018728's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000018728's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000018728	-	89	54.257	ENSAPOG00000005848	-	92	54.925	Acanthochromis_polyacanthus
ENSELUG00000018728	-	89	55.705	ENSACIG00000006790	-	84	66.187	Amphilophus_citrinellus
ENSELUG00000018728	-	89	53.411	ENSAOCG00000009106	-	92	53.910	Amphiprion_ocellaris
ENSELUG00000018728	-	52	54.942	ENSAOCG00000003866	-	80	58.986	Amphiprion_ocellaris
ENSELUG00000018728	-	89	53.577	ENSAPEG00000004229	-	92	54.077	Amphiprion_percula
ENSELUG00000018728	-	52	54.942	ENSAPEG00000005727	-	84	46.099	Amphiprion_percula
ENSELUG00000018728	-	89	54.653	ENSATEG00000013053	-	74	78.469	Anabas_testudineus
ENSELUG00000018728	-	50	57.227	ENSATEG00000002260	-	86	56.967	Anabas_testudineus
ENSELUG00000018728	-	88	39.726	ENSATEG00000006140	si:dkey-206d17.12	79	41.155	Anabas_testudineus
ENSELUG00000018728	-	92	53.635	ENSACLG00000018534	-	95	54.120	Astatotilapia_calliptera
ENSELUG00000018728	-	89	39.644	ENSAMXG00000001736	zc3h12a	96	39.644	Astyanax_mexicanus
ENSELUG00000018728	-	89	50.921	ENSAMXG00000030754	-	96	50.921	Astyanax_mexicanus
ENSELUG00000018728	-	52	56.897	ENSCSEG00000010073	-	74	60.909	Cynoglossus_semilaevis
ENSELUG00000018728	-	89	51.573	ENSCVAG00000001077	-	76	76.077	Cyprinodon_variegatus
ENSELUG00000018728	-	85	41.563	ENSCVAG00000001516	si:dkey-206d17.12	86	41.682	Cyprinodon_variegatus
ENSELUG00000018728	-	89	51.342	ENSFHEG00000011425	-	96	51.678	Fundulus_heteroclitus
ENSELUG00000018728	-	52	54.624	ENSFHEG00000021225	-	82	46.104	Fundulus_heteroclitus
ENSELUG00000018728	-	86	38.214	ENSGAFG00000019001	si:dkey-206d17.12	88	38.214	Gambusia_affinis
ENSELUG00000018728	-	89	51.926	ENSGAFG00000009523	-	96	52.605	Gambusia_affinis
ENSELUG00000018728	-	88	41.166	ENSGACG00000013859	zc3h12a	93	41.237	Gasterosteus_aculeatus
ENSELUG00000018728	-	92	55.241	ENSHBUG00000021584	-	80	76.056	Haplochromis_burtoni
ENSELUG00000018728	-	89	52.778	ENSIPUG00000011663	-	96	52.778	Ictalurus_punctatus
ENSELUG00000018728	-	89	52.137	ENSKMAG00000014401	-	96	52.137	Kryptolebias_marmoratus
ENSELUG00000018728	-	89	39.116	ENSLBEG00000027429	zc3h12a	94	39.116	Labrus_bergylta
ENSELUG00000018728	-	85	36.097	ENSLBEG00000017593	si:dkey-206d17.12	78	38.477	Labrus_bergylta
ENSELUG00000018728	-	51	58.529	ENSLBEG00000012554	-	74	52.206	Labrus_bergylta
ENSELUG00000018728	-	89	53.504	ENSLBEG00000012121	-	96	53.504	Labrus_bergylta
ENSELUG00000018728	-	88	44.560	ENSLACG00000017365	ZC3H12A	90	44.618	Latimeria_chalumnae
ENSELUG00000018728	-	57	71.821	ENSLOCG00000017000	-	71	71.821	Lepisosteus_oculatus
ENSELUG00000018728	-	89	55.196	ENSMAMG00000004463	-	78	77.512	Mastacembelus_armatus
ENSELUG00000018728	-	52	55.056	ENSMAMG00000021794	-	76	61.751	Mastacembelus_armatus
ENSELUG00000018728	-	92	53.635	ENSMZEG00005015555	-	95	54.120	Maylandia_zebra
ENSELUG00000018728	-	89	43.074	ENSMAUG00000012893	Zc3h12a	89	42.905	Mesocricetus_auratus
ENSELUG00000018728	-	88	51.265	ENSMMOG00000014855	-	79	72.038	Mola_mola
ENSELUG00000018728	-	89	54.202	ENSMALG00000018908	-	96	54.530	Monopterus_albus
ENSELUG00000018728	-	92	52.932	ENSNBRG00000010961	-	78	76.812	Neolamprologus_brichardi
ENSELUG00000018728	-	51	56.047	ENSNBRG00000009607	zc3h12a	52	55.621	Neolamprologus_brichardi
ENSELUG00000018728	-	89	41.426	ENSONIG00000016235	zc3h12a	93	41.156	Oreochromis_niloticus
ENSELUG00000018728	-	89	43.945	ENSOANG00000002060	ZC3H12A	86	43.772	Ornithorhynchus_anatinus
ENSELUG00000018728	-	89	51.525	ENSORLG00000015280	-	96	52.203	Oryzias_latipes
ENSELUG00000018728	-	89	51.777	ENSORLG00020008580	-	84	52.453	Oryzias_latipes_hni
ENSELUG00000018728	-	89	51.361	ENSORLG00015003680	-	84	52.115	Oryzias_latipes_hsok
ENSELUG00000018728	-	75	77.978	ENSOMEG00000011669	-	96	51.438	Oryzias_melastigma
ENSELUG00000018728	-	90	48.735	ENSPKIG00000019720	-	99	48.735	Paramormyrops_kingsleyae
ENSELUG00000018728	-	89	43.151	ENSPEMG00000024080	Zc3h12a	89	43.151	Peromyscus_maniculatus_bairdii
ENSELUG00000018728	-	68	37.788	ENSPFOG00000002933	si:dkey-206d17.12	97	37.788	Poecilia_formosa
ENSELUG00000018728	-	89	53.367	ENSPFOG00000004135	-	96	53.716	Poecilia_formosa
ENSELUG00000018728	-	68	38.018	ENSPLAG00000016243	si:dkey-206d17.12	89	38.018	Poecilia_latipinna
ENSELUG00000018728	-	89	53.020	ENSPLAG00000001211	-	97	53.030	Poecilia_latipinna
ENSELUG00000018728	-	85	38.489	ENSPMEG00000011188	si:dkey-206d17.12	88	39.344	Poecilia_mexicana
ENSELUG00000018728	-	89	52.318	ENSPREG00000020369	-	92	52.755	Poecilia_reticulata
ENSELUG00000018728	-	92	53.635	ENSPNYG00000010663	-	95	54.120	Pundamilia_nyererei
ENSELUG00000018728	-	89	50.759	ENSPNAG00000012124	-	97	50.590	Pygocentrus_nattereri
ENSELUG00000018728	-	89	54.701	ENSSMAG00000017632	-	96	54.701	Scophthalmus_maximus
ENSELUG00000018728	-	92	53.420	ENSSDUG00000010581	-	79	76.667	Seriola_dumerili
ENSELUG00000018728	-	89	55.143	ENSSLDG00000022022	-	91	55.143	Seriola_lalandi_dorsalis
ENSELUG00000018728	-	89	53.523	ENSSPAG00000022537	-	91	53.523	Stegastes_partitus
ENSELUG00000018728	-	89	52.269	ENSXCOG00000001538	-	82	67.153	Xiphophorus_couchianus
ENSELUG00000018728	-	50	55.828	ENSXCOG00000008984	zc3h12a	93	40.728	Xiphophorus_couchianus
ENSELUG00000018728	-	86	38.559	ENSXMAG00000025043	si:dkey-206d17.12	88	38.559	Xiphophorus_maculatus
ENSELUG00000018728	-	50	55.521	ENSXMAG00000014646	zc3h12a	50	55.521	Xiphophorus_maculatus
ENSELUG00000018728	-	89	52.365	ENSXMAG00000005023	-	82	67.153	Xiphophorus_maculatus