EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000018742 (Gene tree)
Gene ID: 105016999
Gene Symbol: -
Alias: -
Full Name: snail family transcriptional repressor 3
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 4397 bases
Position: chrLG02:8783806-8788202
Accession: 105016999
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000019406	zf-C2H2	PF00096.26	1.2e-24	1	4
ENSELUP00000019406	zf-C2H2	PF00096.26	1.2e-24	2	4
ENSELUP00000019406	zf-C2H2	PF00096.26	1.2e-24	3	4
ENSELUP00000019406	zf-C2H2	PF00096.26	1.2e-24	4	4
ENSELUP00000019404	zf-C2H2	PF00096.26	9.8e-14	1	2
ENSELUP00000019404	zf-C2H2	PF00096.26	9.8e-14	2	2
ENSELUP00000019406	zf-met	PF12874.7	8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000029580	-	1832	XM_010881265	ENSELUP00000019406	278 (aa)	XP_010879567	UPI000577AA34
ENSELUT00000041001	-	1954	-	ENSELUP00000019404	335 (aa)	-	-

Gene Model

Click here to download ENSELUG00000018742's gene model file

Pathways

Pathway ID	Pathway Name	Source
els04520	Adherens junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000018742's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000018742	-	87	42.537	ENSELUG00000000423	-	56	42.537
ENSELUG00000018742	-	50	55.396	ENSELUG00000005435	scrt1b	50	55.396
ENSELUG00000018742	-	69	36.364	ENSELUG00000004844	snai1a	87	36.680
ENSELUG00000018742	-	100	44.966	ENSELUG00000002056	SNAI1	100	47.651
ENSELUG00000018742	-	50	55.396	ENSELUG00000022228	scrt1a	50	55.396
ENSELUG00000018742	-	99	56.786	ENSELUG00000021795	SNAI2	78	56.140

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000018742	-	99	48.993	ENSG00000185669	SNAI3	99	51.007	Homo_sapiens
ENSELUG00000018742	-	99	56.597	ENSG00000019549	SNAI2	99	55.986	Homo_sapiens
ENSELUG00000018742	-	99	56.944	ENSAMEG00000009606	SNAI2	99	56.747	Ailuropoda_melanoleuca
ENSELUG00000018742	-	99	50.000	ENSANAG00000032748	SNAI3	99	50.000	Aotus_nancymaae
ENSELUG00000018742	-	99	56.597	ENSANAG00000021163	SNAI2	99	55.986	Aotus_nancymaae
ENSELUG00000018742	-	99	47.241	ENSBTAG00000017528	SNAI3	99	48.013	Bos_taurus
ENSELUG00000018742	-	99	56.098	ENSBTAG00000013227	SNAI2	99	54.965	Bos_taurus
ENSELUG00000018742	-	99	56.597	ENSCJAG00000013499	SNAI2	99	55.986	Callithrix_jacchus
ENSELUG00000018742	-	99	57.639	ENSCAFG00000006638	SNAI2	99	57.439	Canis_familiaris
ENSELUG00000018742	-	99	49.020	ENSCAFG00000029458	SNAI3	99	50.000	Canis_familiaris
ENSELUG00000018742	-	99	49.346	ENSCAFG00020004719	SNAI3	99	50.327	Canis_lupus_dingo
ENSELUG00000018742	-	99	57.639	ENSCAFG00020015384	SNAI2	99	57.439	Canis_lupus_dingo
ENSELUG00000018742	-	99	56.446	ENSCHIG00000024410	SNAI2	99	55.319	Capra_hircus
ENSELUG00000018742	-	99	47.869	ENSCHIG00000018087	SNAI3	99	48.344	Capra_hircus
ENSELUG00000018742	-	50	76.259	ENSTSYG00000025594	SNAI3	64	62.963	Carlito_syrichta
ENSELUG00000018742	-	53	82.877	ENSTSYG00000030892	SNAI2	54	82.877	Carlito_syrichta
ENSELUG00000018742	-	53	81.507	ENSCAPG00000013078	SNAI2	65	81.507	Cavia_aperea
ENSELUG00000018742	-	99	56.597	ENSCCAG00000024100	SNAI2	99	55.986	Cebus_capucinus
ENSELUG00000018742	-	99	51.505	ENSCATG00000031714	SNAI3	99	51.505	Cercocebus_atys
ENSELUG00000018742	-	99	56.597	ENSCATG00000028656	SNAI2	99	55.986	Cercocebus_atys
ENSELUG00000018742	-	99	56.944	ENSCLAG00000011797	SNAI2	99	56.747	Chinchilla_lanigera
ENSELUG00000018742	-	99	56.597	ENSCSAG00000014787	SNAI2	99	55.986	Chlorocebus_sabaeus
ENSELUG00000018742	-	68	66.138	ENSCSAG00000003047	SNAI3	64	66.138	Chlorocebus_sabaeus
ENSELUG00000018742	-	99	54.422	ENSCPBG00000020255	SNAI2	99	55.517	Chrysemys_picta_bellii
ENSELUG00000018742	-	100	53.922	ENSCPBG00000023474	SNAI3	100	53.922	Chrysemys_picta_bellii
ENSELUG00000018742	-	68	66.138	ENSCANG00000031124	SNAI3	58	66.138	Colobus_angolensis_palliatus
ENSELUG00000018742	-	99	56.597	ENSCANG00000029656	SNAI2	99	55.986	Colobus_angolensis_palliatus
ENSELUG00000018742	-	99	47.931	ENSCGRG00001011389	Snai3	99	48.276	Cricetulus_griseus_chok1gshd
ENSELUG00000018742	-	99	55.862	ENSCGRG00001013674	Snai2	99	55.594	Cricetulus_griseus_chok1gshd
ENSELUG00000018742	-	99	55.862	ENSCGRG00000012119	Snai2	99	55.594	Cricetulus_griseus_crigri
ENSELUG00000018742	-	99	47.931	ENSCGRG00000014932	Snai3	99	48.276	Cricetulus_griseus_crigri
ENSELUG00000018742	-	79	33.766	ENSDNOG00000035204	-	100	35.498	Dasypus_novemcinctus
ENSELUG00000018742	-	99	56.940	ENSDORG00000029620	Snai2	99	56.679	Dipodomys_ordii
ENSELUG00000018742	-	81	55.556	ENSEASG00005000614	SNAI3	73	57.709	Equus_asinus_asinus
ENSELUG00000018742	-	100	49.835	ENSECAG00000012131	SNAI3	100	51.351	Equus_caballus
ENSELUG00000018742	-	99	43.464	ENSEEUG00000000841	SNAI3	99	44.224	Erinaceus_europaeus
ENSELUG00000018742	-	99	45.238	ENSFCAG00000043885	SNAI3	99	45.238	Felis_catus
ENSELUG00000018742	-	50	83.453	ENSFALG00000012974	-	79	67.568	Ficedula_albicollis
ENSELUG00000018742	-	99	56.944	ENSFDAG00000016958	SNAI2	99	56.747	Fukomys_damarensis
ENSELUG00000018742	-	99	54.422	ENSGAGG00000000426	SNAI2	99	55.517	Gopherus_agassizii
ENSELUG00000018742	-	99	53.947	ENSGAGG00000023571	SNAI3	100	53.947	Gopherus_agassizii
ENSELUG00000018742	-	99	48.845	ENSGGOG00000012559	SNAI3	99	50.502	Gorilla_gorilla
ENSELUG00000018742	-	99	56.597	ENSGGOG00000000959	SNAI2	99	55.986	Gorilla_gorilla
ENSELUG00000018742	-	99	54.874	ENSHCOG00000019435	SNAI2	99	57.040	Hippocampus_comes
ENSELUG00000018742	-	99	54.355	ENSIPUG00000000131	snai2	99	54.355	Ictalurus_punctatus
ENSELUG00000018742	-	99	56.944	ENSSTOG00000028743	SNAI2	99	56.184	Ictidomys_tridecemlineatus
ENSELUG00000018742	-	99	44.795	ENSJJAG00000019934	Snai3	99	48.110	Jaculus_jaculus
ENSELUG00000018742	-	99	54.895	ENSLOCG00000005992	SNAI2	99	54.895	Lepisosteus_oculatus
ENSELUG00000018742	-	52	94.444	ENSLOCG00000004887	SNAI3	97	87.342	Lepisosteus_oculatus
ENSELUG00000018742	-	99	55.903	ENSLAFG00000009299	SNAI2	99	57.292	Loxodonta_africana
ENSELUG00000018742	-	99	51.971	ENSLAFG00000005117	SNAI3	99	52.508	Loxodonta_africana
ENSELUG00000018742	-	99	52.318	ENSMFAG00000032064	SNAI3	99	52.318	Macaca_fascicularis
ENSELUG00000018742	-	99	56.597	ENSMFAG00000046061	SNAI2	99	55.986	Macaca_fascicularis
ENSELUG00000018742	-	99	56.597	ENSMMUG00000016195	SNAI2	99	55.986	Macaca_mulatta
ENSELUG00000018742	-	99	52.318	ENSMMUG00000008716	SNAI3	99	52.318	Macaca_mulatta
ENSELUG00000018742	-	99	52.318	ENSMNEG00000045515	SNAI3	99	52.318	Macaca_nemestrina
ENSELUG00000018742	-	99	56.597	ENSMNEG00000034216	SNAI2	99	55.986	Macaca_nemestrina
ENSELUG00000018742	-	99	56.597	ENSMLEG00000034407	SNAI2	99	55.986	Mandrillus_leucophaeus
ENSELUG00000018742	-	68	66.138	ENSMLEG00000033191	SNAI3	64	66.138	Mandrillus_leucophaeus
ENSELUG00000018742	-	99	49.481	ENSMAUG00000001685	Snai3	99	49.481	Mesocricetus_auratus
ENSELUG00000018742	-	99	56.164	ENSMAUG00000008119	Snai2	99	56.491	Mesocricetus_auratus
ENSELUG00000018742	-	99	49.310	ENSMOCG00000003536	Snai3	99	49.310	Microtus_ochrogaster
ENSELUG00000018742	-	99	55.709	ENSMOCG00000006622	Snai2	99	55.172	Microtus_ochrogaster
ENSELUG00000018742	-	99	55.477	ENSMODG00000010173	SNAI2	99	55.477	Monodelphis_domestica
ENSELUG00000018742	-	99	56.747	MGP_CAROLIEiJ_G0020483	Snai2	99	57.439	Mus_caroli
ENSELUG00000018742	-	99	48.454	MGP_CAROLIEiJ_G0031662	Snai3	99	48.454	Mus_caroli
ENSELUG00000018742	-	99	56.747	ENSMUSG00000022676	Snai2	99	57.439	Mus_musculus
ENSELUG00000018742	-	99	49.141	ENSMUSG00000006587	Snai3	99	49.141	Mus_musculus
ENSELUG00000018742	-	99	48.630	MGP_PahariEiJ_G0023260	Snai3	99	48.630	Mus_pahari
ENSELUG00000018742	-	99	56.747	MGP_PahariEiJ_G0016188	Snai2	99	57.439	Mus_pahari
ENSELUG00000018742	-	99	56.747	MGP_SPRETEiJ_G0021379	Snai2	99	57.439	Mus_spretus
ENSELUG00000018742	-	99	49.141	MGP_SPRETEiJ_G0032780	Snai3	99	49.141	Mus_spretus
ENSELUG00000018742	-	99	49.000	ENSMPUG00000008104	SNAI3	99	50.000	Mustela_putorius_furo
ENSELUG00000018742	-	99	56.944	ENSMPUG00000010793	SNAI2	99	56.747	Mustela_putorius_furo
ENSELUG00000018742	-	99	57.292	ENSMLUG00000001086	SNAI2	99	57.093	Myotis_lucifugus
ENSELUG00000018742	-	99	48.639	ENSNGAG00000023039	Snai3	99	48.639	Nannospalax_galili
ENSELUG00000018742	-	99	56.944	ENSNLEG00000013421	SNAI2	99	56.338	Nomascus_leucogenys
ENSELUG00000018742	-	99	50.000	ENSNLEG00000000595	SNAI3	99	51.515	Nomascus_leucogenys
ENSELUG00000018742	-	97	55.556	ENSMEUG00000009510	SNAI2	100	55.556	Notamacropus_eugenii
ENSELUG00000018742	-	99	56.993	ENSOANG00000007267	SNAI2	99	57.439	Ornithorhynchus_anatinus
ENSELUG00000018742	-	99	48.649	ENSOGAG00000000419	SNAI3	99	48.525	Otolemur_garnettii
ENSELUG00000018742	-	99	56.446	ENSOARG00000013030	SNAI2	99	55.319	Ovis_aries
ENSELUG00000018742	-	99	48.993	ENSPPAG00000043301	SNAI3	99	50.680	Pan_paniscus
ENSELUG00000018742	-	99	56.597	ENSPPAG00000015662	SNAI2	99	55.986	Pan_paniscus
ENSELUG00000018742	-	99	55.903	ENSPPRG00000012562	-	99	56.747	Panthera_pardus
ENSELUG00000018742	-	99	45.423	ENSPPRG00000008511	SNAI3	99	45.423	Panthera_pardus
ENSELUG00000018742	-	99	49.320	ENSPTRG00000008460	SNAI3	99	50.847	Pan_troglodytes
ENSELUG00000018742	-	99	56.597	ENSPTRG00000020235	SNAI2	99	55.986	Pan_troglodytes
ENSELUG00000018742	-	99	56.597	ENSPANG00000017540	SNAI2	99	55.986	Papio_anubis
ENSELUG00000018742	-	99	52.318	ENSPANG00000000509	SNAI3	99	52.318	Papio_anubis
ENSELUG00000018742	-	99	55.872	ENSPKIG00000002254	SNAI2	99	57.609	Paramormyrops_kingsleyae
ENSELUG00000018742	-	100	59.150	ENSPKIG00000007872	SNAI3	100	59.150	Paramormyrops_kingsleyae
ENSELUG00000018742	-	99	55.017	ENSPSIG00000016395	SNAI2	99	55.517	Pelodiscus_sinensis
ENSELUG00000018742	-	82	58.723	ENSPSIG00000004262	SNAI3	91	58.723	Pelodiscus_sinensis
ENSELUG00000018742	-	99	54.513	ENSPMGG00000013179	SNAI2	99	55.160	Periophthalmus_magnuspinnatus
ENSELUG00000018742	-	99	56.055	ENSPEMG00000011739	Snai2	99	57.092	Peromyscus_maniculatus_bairdii
ENSELUG00000018742	-	99	55.830	ENSPCIG00000025156	SNAI2	99	55.830	Phascolarctos_cinereus
ENSELUG00000018742	-	53	82.192	ENSPREG00000008528	SNAI2	54	82.192	Poecilia_reticulata
ENSELUG00000018742	-	99	56.597	ENSPPYG00000018578	SNAI2	99	55.986	Pongo_abelii
ENSELUG00000018742	-	99	49.833	ENSPPYG00000007643	SNAI3	99	51.495	Pongo_abelii
ENSELUG00000018742	-	99	55.903	ENSPCOG00000015656	SNAI2	99	56.747	Propithecus_coquereli
ENSELUG00000018742	-	99	55.903	ENSPVAG00000009457	SNAI2	99	55.944	Pteropus_vampyrus
ENSELUG00000018742	-	99	48.276	ENSRNOG00000013586	Snai3	99	48.276	Rattus_norvegicus
ENSELUG00000018742	-	99	56.597	ENSRBIG00000041133	SNAI2	99	55.986	Rhinopithecus_bieti
ENSELUG00000018742	-	99	51.515	ENSRBIG00000025770	SNAI3	99	51.515	Rhinopithecus_bieti
ENSELUG00000018742	-	99	51.178	ENSRROG00000032757	SNAI3	99	51.178	Rhinopithecus_roxellana
ENSELUG00000018742	-	99	56.597	ENSRROG00000032273	SNAI2	99	55.986	Rhinopithecus_roxellana
ENSELUG00000018742	-	99	56.597	ENSSBOG00000035774	SNAI2	99	55.986	Saimiri_boliviensis_boliviensis
ENSELUG00000018742	-	99	55.830	ENSSHAG00000004205	SNAI2	99	55.830	Sarcophilus_harrisii
ENSELUG00000018742	-	99	56.738	ENSSFOG00015018025	SNAI2	99	55.439	Scleropages_formosus
ENSELUG00000018742	-	99	58.900	ENSSFOG00015016115	snai3	93	58.958	Scleropages_formosus
ENSELUG00000018742	-	99	54.266	ENSSPUG00000005427	-	99	55.363	Sphenodon_punctatus
ENSELUG00000018742	-	99	56.597	ENSSSCG00000039568	SNAI2	99	56.507	Sus_scrofa
ENSELUG00000018742	-	99	46.026	ENSTTRG00000006262	SNAI3	99	47.333	Tursiops_truncatus
ENSELUG00000018742	-	99	49.832	ENSUAMG00000020030	SNAI3	99	50.512	Ursus_americanus
ENSELUG00000018742	-	53	82.877	ENSUAMG00000014942	SNAI2	63	82.877	Ursus_americanus
ENSELUG00000018742	-	97	55.830	ENSUMAG00000006525	SNAI2	99	55.634	Ursus_maritimus
ENSELUG00000018742	-	99	57.292	ENSVVUG00000017625	SNAI2	99	57.093	Vulpes_vulpes
ENSELUG00000018742	-	99	48.693	ENSVVUG00000003233	SNAI3	99	49.673	Vulpes_vulpes
ENSELUG00000018742	-	99	55.290	ENSXETG00000024006	snai2	99	55.290	Xenopus_tropicalis