EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000018856 (Gene tree)
Gene ID: 105021339
Gene Symbol: ddx21
Alias: cb960|wu:fi30c07|wu:fi34d08
Full Name: nucleolar RNA helicase 2-like
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 15476 bases
Position: chrLG06:21401430-21416905
Accession: 105021339
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000038876	GUCT	PF08152.12	2.2e-33	1	1
ENSELUP00000019559	GUCT	PF08152.12	2.3e-33	1	1
ENSELUP00000038876	ResIII	PF04851.15	4.5e-09	1	1
ENSELUP00000019559	ResIII	PF04851.15	4.9e-09	1	1
ENSELUP00000038876	DEAD	PF00270.29	3.9e-49	1	1
ENSELUP00000019559	DEAD	PF00270.29	4e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000029734	-	6477	XM_010888934	ENSELUP00000019559	766 (aa)	XP_010887236	UPI000577DE61
ENSELUT00000041047	-	6399	-	ENSELUP00000038876	740 (aa)	-	-

Gene Model

Click here to download ENSELUG00000018856's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000018856's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000018856	ddx21	56	30.324	ENSELUG00000009107	ddx5	53	33.333
ENSELUG00000018856	ddx21	51	32.658	ENSELUG00000019496	DDX41	62	32.658
ENSELUG00000018856	ddx21	53	31.190	ENSELUG00000023518	-	50	33.978
ENSELUG00000018856	ddx21	55	32.569	ENSELUG00000008640	ddx18	61	32.706

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000018856	ddx21	80	70.370	ENSG00000165732	DDX21	84	66.285	Homo_sapiens
ENSELUG00000018856	ddx21	71	68.831	ENSAPOG00000012269	ddx21	97	69.061	Acanthochromis_polyacanthus
ENSELUG00000018856	ddx21	81	70.159	ENSAMEG00000017978	DDX21	63	74.815	Ailuropoda_melanoleuca
ENSELUG00000018856	ddx21	76	79.727	ENSACIG00000006429	ddx21	89	73.174	Amphilophus_citrinellus
ENSELUG00000018856	ddx21	92	69.806	ENSAOCG00000023174	ddx21	92	71.064	Amphiprion_ocellaris
ENSELUG00000018856	ddx21	92	69.806	ENSAPEG00000007108	ddx21	92	71.064	Amphiprion_percula
ENSELUG00000018856	ddx21	92	73.109	ENSATEG00000022194	ddx21	91	73.409	Anabas_testudineus
ENSELUG00000018856	ddx21	88	63.328	ENSAPLG00000013022	-	78	74.630	Anas_platyrhynchos
ENSELUG00000018856	ddx21	84	67.957	ENSACAG00000009829	DDX21	68	75.605	Anolis_carolinensis
ENSELUG00000018856	ddx21	80	69.790	ENSANAG00000038109	DDX21	92	75.710	Aotus_nancymaae
ENSELUG00000018856	ddx21	93	71.508	ENSACLG00000008248	ddx21	87	71.449	Astatotilapia_calliptera
ENSELUG00000018856	ddx21	86	76.226	ENSAMXG00000009140	ddx21	84	76.807	Astyanax_mexicanus
ENSELUG00000018856	ddx21	82	67.572	ENSBTAG00000014558	DDX21	69	72.913	Bos_taurus
ENSELUG00000018856	ddx21	80	70.209	ENSCJAG00000012876	DDX21	86	63.244	Callithrix_jacchus
ENSELUG00000018856	ddx21	99	60.674	ENSCAFG00000013791	DDX21	74	71.256	Canis_familiaris
ENSELUG00000018856	ddx21	82	68.421	ENSCHIG00000000248	-	71	72.913	Capra_hircus
ENSELUG00000018856	ddx21	80	51.702	ENSCHIG00000006053	-	65	52.230	Capra_hircus
ENSELUG00000018856	ddx21	80	53.323	ENSCHIG00000014104	-	65	55.390	Capra_hircus
ENSELUG00000018856	ddx21	84	68.056	ENSTSYG00000011231	DDX21	83	65.138	Carlito_syrichta
ENSELUG00000018856	ddx21	86	55.556	ENSCAPG00000005945	DDX21	66	59.155	Cavia_aperea
ENSELUG00000018856	ddx21	94	63.282	ENSCPOG00000015479	DDX21	74	70.242	Cavia_porcellus
ENSELUG00000018856	ddx21	80	69.628	ENSCCAG00000026288	DDX21	94	73.433	Cebus_capucinus
ENSELUG00000018856	ddx21	81	69.010	ENSCATG00000043540	DDX21	77	65.794	Cercocebus_atys
ENSELUG00000018856	ddx21	77	54.992	ENSCATG00000045019	-	68	57.529	Cercocebus_atys
ENSELUG00000018856	ddx21	95	61.477	ENSCLAG00000012235	DDX21	75	70.415	Chinchilla_lanigera
ENSELUG00000018856	ddx21	84	61.325	ENSCHOG00000000234	DDX21	88	54.412	Choloepus_hoffmanni
ENSELUG00000018856	ddx21	87	66.368	ENSCPBG00000019934	-	78	75.000	Chrysemys_picta_bellii
ENSELUG00000018856	ddx21	86	69.382	ENSCPBG00000019937	-	66	78.704	Chrysemys_picta_bellii
ENSELUG00000018856	ddx21	81	68.998	ENSCANG00000039926	DDX21	77	65.794	Colobus_angolensis_palliatus
ENSELUG00000018856	ddx21	95	49.388	ENSCANG00000036110	-	68	55.243	Colobus_angolensis_palliatus
ENSELUG00000018856	ddx21	88	56.250	ENSCGRG00001017824	-	74	60.839	Cricetulus_griseus_chok1gshd
ENSELUG00000018856	ddx21	88	64.714	ENSCGRG00001016264	-	69	74.157	Cricetulus_griseus_chok1gshd
ENSELUG00000018856	ddx21	88	56.395	ENSCGRG00000008450	-	74	61.014	Cricetulus_griseus_crigri
ENSELUG00000018856	ddx21	88	64.714	ENSCGRG00000015134	-	69	74.157	Cricetulus_griseus_crigri
ENSELUG00000018856	ddx21	91	69.114	ENSCSEG00000013939	ddx21	92	68.100	Cynoglossus_semilaevis
ENSELUG00000018856	ddx21	100	67.557	ENSCVAG00000018333	ddx21	92	71.086	Cyprinodon_variegatus
ENSELUG00000018856	ddx21	76	76.701	ENSDARG00000063626	ddx21	83	70.909	Danio_rerio
ENSELUG00000018856	ddx21	88	67.007	ENSDNOG00000001680	DDX21	78	70.785	Dasypus_novemcinctus
ENSELUG00000018856	ddx21	85	62.730	ENSDORG00000002202	Ddx21	75	64.214	Dipodomys_ordii
ENSELUG00000018856	ddx21	76	72.069	ENSETEG00000014073	DDX21	71	71.479	Echinops_telfairi
ENSELUG00000018856	ddx21	84	68.615	ENSEASG00005015598	DDX21	73	71.207	Equus_asinus_asinus
ENSELUG00000018856	ddx21	84	68.682	ENSECAG00000010810	DDX21	74	71.034	Equus_caballus
ENSELUG00000018856	ddx21	74	66.200	ENSEEUG00000005959	DDX21	80	67.084	Erinaceus_europaeus
ENSELUG00000018856	ddx21	79	71.921	ENSFCAG00000002109	DDX21	73	72.289	Felis_catus
ENSELUG00000018856	ddx21	75	71.278	ENSFALG00000013043	-	78	73.889	Ficedula_albicollis
ENSELUG00000018856	ddx21	80	66.993	ENSFALG00000013022	-	83	72.695	Ficedula_albicollis
ENSELUG00000018856	ddx21	99	58.446	ENSFDAG00000007401	DDX21	74	70.415	Fukomys_damarensis
ENSELUG00000018856	ddx21	91	68.724	ENSFHEG00000019089	ddx21	91	68.627	Fundulus_heteroclitus
ENSELUG00000018856	ddx21	70	74.212	ENSGMOG00000012354	ddx21	88	74.212	Gadus_morhua
ENSELUG00000018856	ddx21	90	60.172	ENSGALG00000042254	-	80	72.407	Gallus_gallus
ENSELUG00000018856	ddx21	75	69.707	ENSGALG00000004144	-	89	65.913	Gallus_gallus
ENSELUG00000018856	ddx21	91	71.167	ENSGAFG00000003427	ddx21	93	70.141	Gambusia_affinis
ENSELUG00000018856	ddx21	74	80.385	ENSGACG00000016060	ddx21	86	80.385	Gasterosteus_aculeatus
ENSELUG00000018856	ddx21	91	62.200	ENSGAGG00000022163	-	72	73.713	Gopherus_agassizii
ENSELUG00000018856	ddx21	79	71.005	ENSGAGG00000022169	-	77	76.111	Gopherus_agassizii
ENSELUG00000018856	ddx21	80	70.370	ENSGGOG00000005065	DDX21	77	66.285	Gorilla_gorilla
ENSELUG00000018856	ddx21	93	71.508	ENSHBUG00000017638	ddx21	87	71.652	Haplochromis_burtoni
ENSELUG00000018856	ddx21	95	63.661	ENSHGLG00000013902	DDX21	74	70.415	Heterocephalus_glaber_female
ENSELUG00000018856	ddx21	95	63.661	ENSHGLG00100015956	DDX21	75	70.415	Heterocephalus_glaber_male
ENSELUG00000018856	ddx21	91	67.751	ENSHCOG00000014503	ddx21	88	68.369	Hippocampus_comes
ENSELUG00000018856	ddx21	86	76.488	ENSIPUG00000006972	ddx21	87	76.762	Ictalurus_punctatus
ENSELUG00000018856	ddx21	90	65.079	ENSSTOG00000011572	DDX21	75	67.468	Ictidomys_tridecemlineatus
ENSELUG00000018856	ddx21	74	70.396	ENSJJAG00000014035	Ddx21	68	74.345	Jaculus_jaculus
ENSELUG00000018856	ddx21	93	68.384	ENSKMAG00000020766	ddx21	92	69.176	Kryptolebias_marmoratus
ENSELUG00000018856	ddx21	91	71.831	ENSLBEG00000001244	ddx21	92	71.994	Labrus_bergylta
ENSELUG00000018856	ddx21	71	77.798	ENSLACG00000000658	DDX21	93	77.963	Latimeria_chalumnae
ENSELUG00000018856	ddx21	91	66.064	ENSLOCG00000009123	ddx21	92	65.925	Lepisosteus_oculatus
ENSELUG00000018856	ddx21	84	68.478	ENSLAFG00000007962	DDX21	73	70.862	Loxodonta_africana
ENSELUG00000018856	ddx21	77	54.975	ENSMFAG00000033536	-	68	57.500	Macaca_fascicularis
ENSELUG00000018856	ddx21	81	69.169	ENSMFAG00000044838	DDX21	92	73.810	Macaca_fascicularis
ENSELUG00000018856	ddx21	98	49.615	ENSMMUG00000032331	-	81	54.071	Macaca_mulatta
ENSELUG00000018856	ddx21	81	69.169	ENSMMUG00000001005	DDX21	77	65.957	Macaca_mulatta
ENSELUG00000018856	ddx21	81	69.169	ENSMNEG00000032825	DDX21	77	65.957	Macaca_nemestrina
ENSELUG00000018856	ddx21	81	65.655	ENSMLEG00000028940	DDX21	89	74.839	Mandrillus_leucophaeus
ENSELUG00000018856	ddx21	77	55.161	ENSMLEG00000028215	-	68	57.722	Mandrillus_leucophaeus
ENSELUG00000018856	ddx21	100	65.974	ENSMAMG00000019683	ddx21	91	67.429	Mastacembelus_armatus
ENSELUG00000018856	ddx21	93	71.508	ENSMZEG00005011618	ddx21	91	71.652	Maylandia_zebra
ENSELUG00000018856	ddx21	72	73.466	ENSMGAG00000004298	DDX21	81	73.713	Meleagris_gallopavo
ENSELUG00000018856	ddx21	88	65.058	ENSMAUG00000011153	Ddx21	77	66.720	Mesocricetus_auratus
ENSELUG00000018856	ddx21	86	66.066	ENSMICG00000015112	-	82	62.997	Microcebus_murinus
ENSELUG00000018856	ddx21	86	61.061	ENSMICG00000033371	-	98	60.598	Microcebus_murinus
ENSELUG00000018856	ddx21	90	64.935	ENSMOCG00000020855	Ddx21	83	65.644	Microtus_ochrogaster
ENSELUG00000018856	ddx21	63	80.913	ENSMMOG00000015938	ddx21	91	80.913	Mola_mola
ENSELUG00000018856	ddx21	70	71.667	ENSMODG00000010727	DDX21	99	61.157	Monodelphis_domestica
ENSELUG00000018856	ddx21	80	71.941	ENSMALG00000010489	ddx21	83	76.340	Monopterus_albus
ENSELUG00000018856	ddx21	79	69.836	MGP_CAROLIEiJ_G0015388	Ddx21	69	73.557	Mus_caroli
ENSELUG00000018856	ddx21	79	70.164	ENSMUSG00000020075	Ddx21	63	73.557	Mus_musculus
ENSELUG00000018856	ddx21	79	70.164	MGP_SPRETEiJ_G0016199	Ddx21	63	73.557	Mus_spretus
ENSELUG00000018856	ddx21	84	68.550	ENSMPUG00000004603	DDX21	86	60.511	Mustela_putorius_furo
ENSELUG00000018856	ddx21	84	67.951	ENSMLUG00000023298	DDX21	71	70.619	Myotis_lucifugus
ENSELUG00000018856	ddx21	80	67.670	ENSNGAG00000022273	Ddx21	74	67.200	Nannospalax_galili
ENSELUG00000018856	ddx21	93	71.648	ENSNBRG00000006198	ddx21	91	71.550	Neolamprologus_brichardi
ENSELUG00000018856	ddx21	80	70.048	ENSNLEG00000011591	DDX21	91	60.640	Nomascus_leucogenys
ENSELUG00000018856	ddx21	68	70.077	ENSOPRG00000001640	DDX21	67	70.312	Ochotona_princeps
ENSELUG00000018856	ddx21	73	58.645	ENSODEG00000012879	-	70	58.801	Octodon_degus
ENSELUG00000018856	ddx21	93	71.250	ENSONIG00000005499	ddx21	86	72.096	Oreochromis_niloticus
ENSELUG00000018856	ddx21	78	65.858	ENSOANG00000004777	DDX21	83	62.906	Ornithorhynchus_anatinus
ENSELUG00000018856	ddx21	79	70.164	ENSOCUG00000002888	DDX21	63	74.206	Oryctolagus_cuniculus
ENSELUG00000018856	ddx21	80	76.423	ENSORLG00000010122	ddx21	83	82.189	Oryzias_latipes
ENSELUG00000018856	ddx21	80	76.260	ENSORLG00020004409	ddx21	82	82.189	Oryzias_latipes_hni
ENSELUG00000018856	ddx21	80	76.260	ENSORLG00015000051	ddx21	83	82.189	Oryzias_latipes_hsok
ENSELUG00000018856	ddx21	100	67.662	ENSOMEG00000004523	ddx21	88	70.487	Oryzias_melastigma
ENSELUG00000018856	ddx21	73	64.413	ENSOGAG00000031242	-	86	65.922	Otolemur_garnettii
ENSELUG00000018856	ddx21	78	68.595	ENSOGAG00000001846	-	63	72.917	Otolemur_garnettii
ENSELUG00000018856	ddx21	82	68.581	ENSOARG00000005307	DDX21	84	63.415	Ovis_aries
ENSELUG00000018856	ddx21	80	70.370	ENSPPAG00000036670	DDX21	77	66.285	Pan_paniscus
ENSELUG00000018856	ddx21	79	71.921	ENSPPRG00000012523	DDX21	73	72.289	Panthera_pardus
ENSELUG00000018856	ddx21	79	71.757	ENSPTIG00000007268	DDX21	73	72.117	Panthera_tigris_altaica
ENSELUG00000018856	ddx21	80	70.370	ENSPTRG00000002563	DDX21	77	66.285	Pan_troglodytes
ENSELUG00000018856	ddx21	92	49.718	ENSPANG00000031334	-	68	57.336	Papio_anubis
ENSELUG00000018856	ddx21	81	68.750	ENSPANG00000022140	DDX21	77	65.794	Papio_anubis
ENSELUG00000018856	ddx21	100	64.313	ENSPKIG00000014660	ddx21	72	80.812	Paramormyrops_kingsleyae
ENSELUG00000018856	ddx21	83	70.347	ENSPSIG00000004724	DDX21	80	77.222	Pelodiscus_sinensis
ENSELUG00000018856	ddx21	99	58.660	ENSPEMG00000018513	Ddx21	72	70.826	Peromyscus_maniculatus_bairdii
ENSELUG00000018856	ddx21	88	67.007	ENSPCIG00000015505	DDX21	84	71.359	Phascolarctos_cinereus
ENSELUG00000018856	ddx21	74	79.545	ENSPFOG00000016196	ddx21	87	70.638	Poecilia_formosa
ENSELUG00000018856	ddx21	69	80.863	ENSPLAG00000017849	ddx21	92	71.538	Poecilia_latipinna
ENSELUG00000018856	ddx21	83	73.717	ENSPMEG00000014571	ddx21	87	70.780	Poecilia_mexicana
ENSELUG00000018856	ddx21	84	68.576	ENSPPYG00000002389	DDX21	91	60.779	Pongo_abelii
ENSELUG00000018856	ddx21	78	66.555	ENSPCAG00000016697	DDX21	85	65.719	Procavia_capensis
ENSELUG00000018856	ddx21	85	66.667	ENSPCOG00000019284	DDX21	73	69.565	Propithecus_coquereli
ENSELUG00000018856	ddx21	84	69.753	ENSPVAG00000009521	DDX21	77	66.612	Pteropus_vampyrus
ENSELUG00000018856	ddx21	69	82.231	ENSPNYG00000015566	ddx21	83	83.107	Pundamilia_nyererei
ENSELUG00000018856	ddx21	82	77.209	ENSPNAG00000004814	ddx21	92	77.880	Pygocentrus_nattereri
ENSELUG00000018856	ddx21	81	67.987	ENSRNOG00000048990	AABR07037356.1	69	72.626	Rattus_norvegicus
ENSELUG00000018856	ddx21	81	68.621	ENSRNOG00000043099	Ddx21	69	73.371	Rattus_norvegicus
ENSELUG00000018856	ddx21	79	66.063	ENSRBIG00000035862	-	71	69.663	Rhinopithecus_bieti
ENSELUG00000018856	ddx21	81	68.998	ENSRBIG00000043721	-	92	72.785	Rhinopithecus_bieti
ENSELUG00000018856	ddx21	81	68.839	ENSRROG00000033387	DDX21	77	65.794	Rhinopithecus_roxellana
ENSELUG00000018856	ddx21	98	47.523	ENSSBOG00000025801	-	70	56.751	Saimiri_boliviensis_boliviensis
ENSELUG00000018856	ddx21	100	66.753	ENSSFOG00015014610	ddx21	84	81.227	Scleropages_formosus
ENSELUG00000018856	ddx21	91	72.792	ENSSMAG00000003932	ddx21	92	72.714	Scophthalmus_maximus
ENSELUG00000018856	ddx21	93	69.931	ENSSDUG00000021420	ddx21	92	70.323	Seriola_dumerili
ENSELUG00000018856	ddx21	72	79.964	ENSSLDG00000025665	ddx21	86	78.761	Seriola_lalandi_dorsalis
ENSELUG00000018856	ddx21	71	76.190	ENSSPUG00000004088	DDX21	75	76.481	Sphenodon_punctatus
ENSELUG00000018856	ddx21	91	69.900	ENSSPAG00000013142	ddx21	92	70.085	Stegastes_partitus
ENSELUG00000018856	ddx21	82	69.134	ENSSSCG00000010247	DDX21	74	70.711	Sus_scrofa
ENSELUG00000018856	ddx21	70	74.259	ENSTGUG00000003810	-	80	74.033	Taeniopygia_guttata
ENSELUG00000018856	ddx21	70	83.302	ENSTRUG00000017570	ddx21	75	83.302	Takifugu_rubripes
ENSELUG00000018856	ddx21	80	74.304	ENSTNIG00000013798	ddx21	90	80.479	Tetraodon_nigroviridis
ENSELUG00000018856	ddx21	85	60.643	ENSTBEG00000002310	DDX21	76	63.051	Tupaia_belangeri
ENSELUG00000018856	ddx21	82	68.088	ENSTTRG00000016398	DDX21	71	71.250	Tursiops_truncatus
ENSELUG00000018856	ddx21	93	64.698	ENSUMAG00000007735	DDX21	78	68.860	Ursus_maritimus
ENSELUG00000018856	ddx21	69	71.402	ENSVPAG00000000627	DDX21	79	70.350	Vicugna_pacos
ENSELUG00000018856	ddx21	99	60.321	ENSVVUG00000020486	DDX21	73	71.207	Vulpes_vulpes
ENSELUG00000018856	ddx21	74	75.606	ENSXCOG00000009654	ddx21	85	69.231	Xiphophorus_couchianus
ENSELUG00000018856	ddx21	91	70.141	ENSXMAG00000008199	ddx21	93	69.111	Xiphophorus_maculatus