EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000018948 (Gene tree)
Gene ID: 105027592
Gene Symbol: snrnp200
Alias: fb63a09|si:ch211-251j10.5|wu:fb63a09
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 24857 bases
Position: chrLG13:13572010-13596866
Accession: 105027592
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000019584	ResIII	PF04851.15	1.3e-26	1	2
ENSELUP00000019584	ResIII	PF04851.15	1.3e-26	2	2
ENSELUP00000019584	DEAD	PF00270.29	2.7e-53	1	2
ENSELUP00000019584	DEAD	PF00270.29	2.7e-53	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000041066	-	11066	XM_010899748	ENSELUP00000019584	2137 (aa)	XP_010898050	UPI0005773653

Gene Model

Click here to download ENSELUG00000018948's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000018948's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000018948	snrnp200	96	40.934	ENSELUG00000023441	ascc3	81	45.429
ENSELUG00000018948	snrnp200	72	31.099	ENSELUG00000018944	hfm1	88	30.872

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000018948	snrnp200	99	90.730	ENSG00000144028	SNRNP200	99	91.482	Homo_sapiens
ENSELUG00000018948	snrnp200	100	96.584	ENSAPOG00000010223	snrnp200	100	96.584	Acanthochromis_polyacanthus
ENSELUG00000018948	snrnp200	99	90.777	ENSAMEG00000008996	SNRNP200	99	90.888	Ailuropoda_melanoleuca
ENSELUG00000018948	snrnp200	97	95.983	ENSACIG00000001764	snrnp200	98	95.983	Amphilophus_citrinellus
ENSELUG00000018948	snrnp200	100	96.303	ENSAOCG00000024593	snrnp200	100	96.303	Amphiprion_ocellaris
ENSELUG00000018948	snrnp200	97	95.715	ENSAPEG00000012554	snrnp200	100	95.715	Amphiprion_percula
ENSELUG00000018948	snrnp200	100	96.256	ENSATEG00000022522	snrnp200	100	96.256	Anabas_testudineus
ENSELUG00000018948	snrnp200	99	90.665	ENSAPLG00000004313	SNRNP200	99	90.728	Anas_platyrhynchos
ENSELUG00000018948	snrnp200	99	89.581	ENSACAG00000000434	SNRNP200	100	89.581	Anolis_carolinensis
ENSELUG00000018948	snrnp200	99	87.996	ENSANAG00000036625	SNRNP200	99	88.097	Aotus_nancymaae
ENSELUG00000018948	snrnp200	99	95.677	ENSACLG00000011188	snrnp200	99	95.677	Astatotilapia_calliptera
ENSELUG00000018948	snrnp200	99	95.019	ENSAMXG00000005684	snrnp200	99	95.019	Astyanax_mexicanus
ENSELUG00000018948	snrnp200	99	90.496	ENSBTAG00000000848	SNRNP200	99	90.606	Bos_taurus
ENSELUG00000018948	snrnp200	99	90.730	ENSCJAG00000007514	SNRNP200	99	90.841	Callithrix_jacchus
ENSELUG00000018948	snrnp200	99	90.014	ENSCAFG00020019979	SNRNP200	99	92.209	Canis_lupus_dingo
ENSELUG00000018948	snrnp200	99	90.496	ENSCHIG00000020611	SNRNP200	99	90.606	Capra_hircus
ENSELUG00000018948	snrnp200	99	90.777	ENSTSYG00000010467	SNRNP200	99	90.888	Carlito_syrichta
ENSELUG00000018948	snrnp200	99	90.268	ENSCAPG00000017234	SNRNP200	99	90.377	Cavia_aperea
ENSELUG00000018948	snrnp200	99	90.590	ENSCPOG00000006776	SNRNP200	99	90.700	Cavia_porcellus
ENSELUG00000018948	snrnp200	99	90.730	ENSCCAG00000033962	SNRNP200	99	90.841	Cebus_capucinus
ENSELUG00000018948	snrnp200	99	90.730	ENSCATG00000015790	SNRNP200	99	90.841	Cercocebus_atys
ENSELUG00000018948	snrnp200	99	90.637	ENSCLAG00000004116	SNRNP200	99	90.747	Chinchilla_lanigera
ENSELUG00000018948	snrnp200	99	90.777	ENSCSAG00000017369	SNRNP200	99	90.888	Chlorocebus_sabaeus
ENSELUG00000018948	snrnp200	73	93.701	ENSCHOG00000012981	-	58	93.701	Choloepus_hoffmanni
ENSELUG00000018948	snrnp200	99	90.697	ENSCPBG00000022571	SNRNP200	99	92.500	Chrysemys_picta_bellii
ENSELUG00000018948	snrnp200	99	75.735	ENSCING00000005082	-	99	76.112	Ciona_intestinalis
ENSELUG00000018948	snrnp200	94	90.443	ENSCANG00000033932	SNRNP200	99	90.559	Colobus_angolensis_palliatus
ENSELUG00000018948	snrnp200	99	90.730	ENSCGRG00001022610	Snrnp200	99	90.841	Cricetulus_griseus_chok1gshd
ENSELUG00000018948	snrnp200	99	90.229	ENSCGRG00000016472	Snrnp200	99	90.338	Cricetulus_griseus_crigri
ENSELUG00000018948	snrnp200	99	95.129	ENSCSEG00000016399	snrnp200	99	95.252	Cynoglossus_semilaevis
ENSELUG00000018948	snrnp200	100	90.360	ENSCVAG00000017631	snrnp200	100	90.360	Cyprinodon_variegatus
ENSELUG00000018948	snrnp200	100	94.946	ENSDARG00000077536	snrnp200	99	94.972	Danio_rerio
ENSELUG00000018948	snrnp200	99	89.326	ENSDNOG00000011227	SNRNP200	99	89.432	Dasypus_novemcinctus
ENSELUG00000018948	snrnp200	99	88.271	ENSDORG00000005861	Snrnp200	99	88.373	Dipodomys_ordii
ENSELUG00000018948	snrnp200	100	73.755	FBgn0263599	l(3)72Ab	99	73.935	Drosophila_melanogaster
ENSELUG00000018948	snrnp200	95	89.750	ENSETEG00000000162	SNRNP200	74	89.750	Echinops_telfairi
ENSELUG00000018948	snrnp200	83	81.166	ENSEBUG00000016524	snrnp200	95	81.166	Eptatretus_burgeri
ENSELUG00000018948	snrnp200	99	89.697	ENSEASG00005001884	SNRNP200	99	89.710	Equus_asinus_asinus
ENSELUG00000018948	snrnp200	99	90.777	ENSECAG00000019675	SNRNP200	99	90.888	Equus_caballus
ENSELUG00000018948	snrnp200	88	100.000	ENSEEUG00000012178	SNRNP200	93	100.000	Erinaceus_europaeus
ENSELUG00000018948	snrnp200	99	90.824	ENSFCAG00000010699	SNRNP200	99	90.935	Felis_catus
ENSELUG00000018948	snrnp200	93	86.607	ENSFALG00000001368	-	94	86.607	Ficedula_albicollis
ENSELUG00000018948	snrnp200	99	90.543	ENSFDAG00000004683	SNRNP200	99	90.653	Fukomys_damarensis
ENSELUG00000018948	snrnp200	100	92.981	ENSFHEG00000003786	snrnp200	100	92.981	Fundulus_heteroclitus
ENSELUG00000018948	snrnp200	100	95.796	ENSGMOG00000004881	snrnp200	99	95.826	Gadus_morhua
ENSELUG00000018948	snrnp200	100	93.074	ENSGAFG00000010807	snrnp200	100	93.074	Gambusia_affinis
ENSELUG00000018948	snrnp200	100	95.845	ENSGACG00000011474	snrnp200	99	95.921	Gasterosteus_aculeatus
ENSELUG00000018948	snrnp200	95	93.976	ENSGAGG00000016069	SNRNP200	99	90.764	Gopherus_agassizii
ENSELUG00000018948	snrnp200	99	90.730	ENSGGOG00000005174	SNRNP200	99	90.841	Gorilla_gorilla
ENSELUG00000018948	snrnp200	97	92.952	ENSHBUG00000011322	snrnp200	99	93.002	Haplochromis_burtoni
ENSELUG00000018948	snrnp200	99	90.590	ENSHGLG00000006654	SNRNP200	99	90.700	Heterocephalus_glaber_female
ENSELUG00000018948	snrnp200	99	90.590	ENSHGLG00100018594	SNRNP200	99	90.700	Heterocephalus_glaber_male
ENSELUG00000018948	snrnp200	99	90.777	ENSSTOG00000016351	SNRNP200	99	90.888	Ictidomys_tridecemlineatus
ENSELUG00000018948	snrnp200	99	90.496	ENSJJAG00000023659	Snrnp200	99	90.606	Jaculus_jaculus
ENSELUG00000018948	snrnp200	100	92.724	ENSKMAG00000003665	snrnp200	99	92.787	Kryptolebias_marmoratus
ENSELUG00000018948	snrnp200	100	96.350	ENSLBEG00000021585	snrnp200	100	96.350	Labrus_bergylta
ENSELUG00000018948	snrnp200	82	92.550	ENSLACG00000000226	SNRNP200	99	92.684	Latimeria_chalumnae
ENSELUG00000018948	snrnp200	100	95.042	ENSLOCG00000015198	snrnp200	99	95.068	Lepisosteus_oculatus
ENSELUG00000018948	snrnp200	99	90.730	ENSLAFG00000015626	SNRNP200	99	90.841	Loxodonta_africana
ENSELUG00000018948	snrnp200	99	90.684	ENSMFAG00000040174	SNRNP200	99	91.860	Macaca_fascicularis
ENSELUG00000018948	snrnp200	99	90.684	ENSMMUG00000023261	SNRNP200	99	90.794	Macaca_mulatta
ENSELUG00000018948	snrnp200	99	90.684	ENSMNEG00000032398	SNRNP200	99	90.794	Macaca_nemestrina
ENSELUG00000018948	snrnp200	99	90.730	ENSMLEG00000019083	SNRNP200	99	91.860	Mandrillus_leucophaeus
ENSELUG00000018948	snrnp200	100	95.370	ENSMAMG00000007851	snrnp200	99	95.397	Mastacembelus_armatus
ENSELUG00000018948	snrnp200	97	92.952	ENSMZEG00005010787	snrnp200	99	93.002	Maylandia_zebra
ENSELUG00000018948	snrnp200	97	90.276	ENSMGAG00000001831	SNRNP200	99	90.414	Meleagris_gallopavo
ENSELUG00000018948	snrnp200	99	90.777	ENSMAUG00000011825	Snrnp200	99	90.888	Mesocricetus_auratus
ENSELUG00000018948	snrnp200	99	90.684	ENSMICG00000004710	SNRNP200	99	90.794	Microcebus_murinus
ENSELUG00000018948	snrnp200	99	88.904	ENSMOCG00000011814	Snrnp200	99	89.009	Microtus_ochrogaster
ENSELUG00000018948	snrnp200	99	94.267	ENSMMOG00000014167	snrnp200	99	94.267	Mola_mola
ENSELUG00000018948	snrnp200	99	90.684	ENSMODG00000008475	SNRNP200	99	90.747	Monodelphis_domestica
ENSELUG00000018948	snrnp200	100	96.350	ENSMALG00000001973	snrnp200	100	96.350	Monopterus_albus
ENSELUG00000018948	snrnp200	99	90.730	MGP_CAROLIEiJ_G0024250	Snrnp200	99	90.841	Mus_caroli
ENSELUG00000018948	snrnp200	99	90.777	ENSMUSG00000003660	Snrnp200	99	90.888	Mus_musculus
ENSELUG00000018948	snrnp200	99	90.777	MGP_PahariEiJ_G0025695	Snrnp200	99	90.888	Mus_pahari
ENSELUG00000018948	snrnp200	99	90.777	MGP_SPRETEiJ_G0025170	Snrnp200	99	93.521	Mus_spretus
ENSELUG00000018948	snrnp200	99	90.824	ENSMPUG00000008949	SNRNP200	99	90.935	Mustela_putorius_furo
ENSELUG00000018948	snrnp200	99	87.500	ENSMLUG00000027511	-	99	87.600	Myotis_lucifugus
ENSELUG00000018948	snrnp200	99	90.369	ENSMLUG00000010493	SNRNP200	99	90.478	Myotis_lucifugus
ENSELUG00000018948	snrnp200	99	90.730	ENSNGAG00000021993	Snrnp200	99	90.841	Nannospalax_galili
ENSELUG00000018948	snrnp200	90	95.708	ENSNBRG00000017960	snrnp200	98	95.708	Neolamprologus_brichardi
ENSELUG00000018948	snrnp200	99	86.332	ENSNLEG00000000025	SNRNP200	99	86.614	Nomascus_leucogenys
ENSELUG00000018948	snrnp200	99	93.814	ENSMEUG00000010532	SNRNP200	78	94.898	Notamacropus_eugenii
ENSELUG00000018948	snrnp200	96	89.543	ENSOPRG00000015464	SNRNP200	99	87.459	Ochotona_princeps
ENSELUG00000018948	snrnp200	99	90.590	ENSODEG00000008366	SNRNP200	99	90.700	Octodon_degus
ENSELUG00000018948	snrnp200	99	95.677	ENSONIG00000010714	snrnp200	99	95.677	Oreochromis_niloticus
ENSELUG00000018948	snrnp200	99	90.684	ENSOCUG00000009864	SNRNP200	99	90.794	Oryctolagus_cuniculus
ENSELUG00000018948	snrnp200	99	94.941	ENSORLG00000012286	snrnp200	99	95.110	Oryzias_latipes
ENSELUG00000018948	snrnp200	99	94.941	ENSORLG00020004648	snrnp200	99	94.972	Oryzias_latipes_hni
ENSELUG00000018948	snrnp200	99	94.988	ENSORLG00015019114	snrnp200	99	95.150	Oryzias_latipes_hsok
ENSELUG00000018948	snrnp200	99	95.207	ENSOMEG00000011834	snrnp200	99	95.207	Oryzias_melastigma
ENSELUG00000018948	snrnp200	99	90.777	ENSOGAG00000006879	SNRNP200	99	90.888	Otolemur_garnettii
ENSELUG00000018948	snrnp200	99	89.705	ENSOARG00000013949	SNRNP200	99	89.812	Ovis_aries
ENSELUG00000018948	snrnp200	99	90.730	ENSPPAG00000041559	SNRNP200	99	90.841	Pan_paniscus
ENSELUG00000018948	snrnp200	99	90.824	ENSPPRG00000004435	SNRNP200	99	90.935	Panthera_pardus
ENSELUG00000018948	snrnp200	99	90.403	ENSPTIG00000006380	SNRNP200	99	90.512	Panthera_tigris_altaica
ENSELUG00000018948	snrnp200	99	90.730	ENSPTRG00000012230	SNRNP200	99	90.841	Pan_troglodytes
ENSELUG00000018948	snrnp200	99	90.684	ENSPANG00000006017	SNRNP200	99	90.794	Papio_anubis
ENSELUG00000018948	snrnp200	100	95.461	ENSPKIG00000014762	snrnp200	99	95.501	Paramormyrops_kingsleyae
ENSELUG00000018948	snrnp200	99	89.752	ENSPSIG00000008580	SNRNP200	99	89.812	Pelodiscus_sinensis
ENSELUG00000018948	snrnp200	99	90.590	ENSPCIG00000023050	SNRNP200	99	90.653	Phascolarctos_cinereus
ENSELUG00000018948	snrnp200	100	95.323	ENSPFOG00000015110	snrnp200	99	95.397	Poecilia_formosa
ENSELUG00000018948	snrnp200	97	95.547	ENSPLAG00000006711	snrnp200	99	95.547	Poecilia_latipinna
ENSELUG00000018948	snrnp200	97	95.382	ENSPMEG00000021166	snrnp200	99	95.382	Poecilia_mexicana
ENSELUG00000018948	snrnp200	100	95.508	ENSPREG00000008875	snrnp200	99	95.583	Poecilia_reticulata
ENSELUG00000018948	snrnp200	99	90.730	ENSPPYG00000012068	SNRNP200	99	90.841	Pongo_abelii
ENSELUG00000018948	snrnp200	97	94.872	ENSPCAG00000008536	SNRNP200	85	94.872	Procavia_capensis
ENSELUG00000018948	snrnp200	99	90.730	ENSPCOG00000024608	SNRNP200	99	90.841	Propithecus_coquereli
ENSELUG00000018948	snrnp200	96	91.402	ENSPVAG00000005860	SNRNP200	92	91.649	Pteropus_vampyrus
ENSELUG00000018948	snrnp200	99	90.956	ENSPNYG00000017476	snrnp200	99	90.956	Pundamilia_nyererei
ENSELUG00000018948	snrnp200	100	90.969	ENSPNAG00000010998	snrnp200	99	91.024	Pygocentrus_nattereri
ENSELUG00000018948	snrnp200	99	90.777	ENSRNOG00000012157	Snrnp200	99	90.888	Rattus_norvegicus
ENSELUG00000018948	snrnp200	99	90.730	ENSRBIG00000044690	-	99	90.841	Rhinopithecus_bieti
ENSELUG00000018948	snrnp200	99	90.730	ENSRROG00000037952	-	99	90.841	Rhinopithecus_roxellana
ENSELUG00000018948	snrnp200	99	90.730	ENSSBOG00000035471	SNRNP200	99	90.841	Saimiri_boliviensis_boliviensis
ENSELUG00000018948	snrnp200	97	90.421	ENSSHAG00000000758	SNRNP200	99	90.511	Sarcophilus_harrisii
ENSELUG00000018948	snrnp200	99	95.959	ENSSFOG00015018826	snrnp200	99	95.959	Scleropages_formosus
ENSELUG00000018948	snrnp200	100	96.303	ENSSMAG00000005463	snrnp200	100	96.303	Scophthalmus_maximus
ENSELUG00000018948	snrnp200	100	96.678	ENSSDUG00000021410	snrnp200	100	96.678	Seriola_dumerili
ENSELUG00000018948	snrnp200	100	96.537	ENSSLDG00000010884	snrnp200	100	96.537	Seriola_lalandi_dorsalis
ENSELUG00000018948	snrnp200	95	87.985	ENSSARG00000010728	SNRNP200	96	87.985	Sorex_araneus
ENSELUG00000018948	snrnp200	99	91.011	ENSSPUG00000003726	-	99	91.076	Sphenodon_punctatus
ENSELUG00000018948	snrnp200	100	96.584	ENSSPAG00000001842	snrnp200	100	96.584	Stegastes_partitus
ENSELUG00000018948	snrnp200	99	90.824	ENSSSCG00000008127	SNRNP200	99	90.935	Sus_scrofa
ENSELUG00000018948	snrnp200	99	82.036	ENSTGUG00000014475	-	100	82.036	Taeniopygia_guttata
ENSELUG00000018948	snrnp200	99	95.630	ENSTRUG00000001307	snrnp200	99	95.630	Takifugu_rubripes
ENSELUG00000018948	snrnp200	99	90.416	ENSTNIG00000004320	snrnp200	99	83.169	Tetraodon_nigroviridis
ENSELUG00000018948	snrnp200	82	93.897	ENSTBEG00000003329	-	67	93.897	Tupaia_belangeri
ENSELUG00000018948	snrnp200	99	90.590	ENSTTRG00000004983	SNRNP200	99	90.700	Tursiops_truncatus
ENSELUG00000018948	snrnp200	75	83.236	ENSUAMG00000008395	-	95	83.430	Ursus_americanus
ENSELUG00000018948	snrnp200	99	90.824	ENSUMAG00000012385	SNRNP200	99	90.935	Ursus_maritimus
ENSELUG00000018948	snrnp200	87	94.643	ENSVPAG00000006434	SNRNP200	66	94.643	Vicugna_pacos
ENSELUG00000018948	snrnp200	99	90.612	ENSVVUG00000026247	SNRNP200	99	90.722	Vulpes_vulpes
ENSELUG00000018948	snrnp200	99	90.412	ENSXETG00000001243	snrnp200	99	90.474	Xenopus_tropicalis
ENSELUG00000018948	snrnp200	97	95.608	ENSXMAG00000002058	snrnp200	98	95.608	Xiphophorus_maculatus