EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000018970 (Gene tree)
Gene ID: 105021764
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 708-like
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 3643 bases
Position: chrLG14:26853234-26856876
Accession: 105021764
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000019671	zf-C2H2	PF00096.26	6.4e-57	1	10
ENSELUP00000019671	zf-C2H2	PF00096.26	6.4e-57	2	10
ENSELUP00000019671	zf-C2H2	PF00096.26	6.4e-57	3	10
ENSELUP00000019671	zf-C2H2	PF00096.26	6.4e-57	4	10
ENSELUP00000019671	zf-C2H2	PF00096.26	6.4e-57	5	10
ENSELUP00000019671	zf-C2H2	PF00096.26	6.4e-57	6	10
ENSELUP00000019671	zf-C2H2	PF00096.26	6.4e-57	7	10
ENSELUP00000019671	zf-C2H2	PF00096.26	6.4e-57	8	10
ENSELUP00000019671	zf-C2H2	PF00096.26	6.4e-57	9	10
ENSELUP00000019671	zf-C2H2	PF00096.26	6.4e-57	10	10
ENSELUP00000038968	zf-C2H2	PF00096.26	1e-55	1	9
ENSELUP00000038968	zf-C2H2	PF00096.26	1e-55	2	9
ENSELUP00000038968	zf-C2H2	PF00096.26	1e-55	3	9
ENSELUP00000038968	zf-C2H2	PF00096.26	1e-55	4	9
ENSELUP00000038968	zf-C2H2	PF00096.26	1e-55	5	9
ENSELUP00000038968	zf-C2H2	PF00096.26	1e-55	6	9
ENSELUP00000038968	zf-C2H2	PF00096.26	1e-55	7	9
ENSELUP00000038968	zf-C2H2	PF00096.26	1e-55	8	9
ENSELUP00000038968	zf-C2H2	PF00096.26	1e-55	9	9
ENSELUP00000019671	zf-met	PF12874.7	1.3e-10	1	1
ENSELUP00000038968	zf-met	PF12874.7	1.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000029869	-	2979	-	ENSELUP00000019671	610 (aa)	-	-
ENSELUT00000029921	-	2465	XM_010889661	ENSELUP00000038968	706 (aa)	XP_010887963	-

Gene Model

Click here to download ENSELUG00000018970's gene model file

Pathways

Pathway ID	Pathway Name	Source
els05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000018970's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000018970	-	83	42.997	ENSELUG00000004677	-	61	43.262
ENSELUG00000018970	-	93	38.235	ENSELUG00000001968	-	95	35.088
ENSELUG00000018970	-	87	38.971	ENSELUG00000021381	-	71	38.971
ENSELUG00000018970	-	91	40.190	ENSELUG00000013357	-	84	40.190
ENSELUG00000018970	-	83	35.379	ENSELUG00000017454	si:ch73-367f21.6	98	35.379
ENSELUG00000018970	-	91	44.106	ENSELUG00000021551	-	83	44.106
ENSELUG00000018970	-	88	41.365	ENSELUG00000012931	-	77	43.519
ENSELUG00000018970	-	81	43.030	ENSELUG00000003015	gfi1ab	66	43.030
ENSELUG00000018970	-	97	36.552	ENSELUG00000008786	-	97	36.552
ENSELUG00000018970	-	72	38.147	ENSELUG00000021525	-	67	38.728
ENSELUG00000018970	-	84	43.816	ENSELUG00000017463	-	96	43.816
ENSELUG00000018970	-	78	37.915	ENSELUG00000021560	-	68	34.082
ENSELUG00000018970	-	81	41.964	ENSELUG00000020211	znf236	75	39.456
ENSELUG00000018970	-	92	42.697	ENSELUG00000021499	-	96	39.779
ENSELUG00000018970	-	89	40.157	ENSELUG00000013321	-	94	42.442
ENSELUG00000018970	-	92	41.451	ENSELUG00000005912	-	85	41.772
ENSELUG00000018970	-	87	45.070	ENSELUG00000018438	znf341	54	45.070
ENSELUG00000018970	-	90	36.782	ENSELUG00000017783	-	74	34.385
ENSELUG00000018970	-	83	41.146	ENSELUG00000021355	-	98	40.541
ENSELUG00000018970	-	80	41.224	ENSELUG00000020882	-	53	41.224
ENSELUG00000018970	-	93	38.326	ENSELUG00000016397	-	58	38.326
ENSELUG00000018970	-	80	43.617	ENSELUG00000021254	-	66	43.617
ENSELUG00000018970	-	93	36.641	ENSELUG00000013245	-	96	37.410
ENSELUG00000018970	-	83	42.308	ENSELUG00000005665	zfp64	63	42.308
ENSELUG00000018970	-	90	36.429	ENSELUG00000013806	-	77	36.429
ENSELUG00000018970	-	94	36.100	ENSELUG00000020017	-	70	36.100
ENSELUG00000018970	-	98	44.832	ENSELUG00000010566	si:dkey-182i3.9	92	44.832
ENSELUG00000018970	-	91	42.241	ENSELUG00000013311	-	82	42.241
ENSELUG00000018970	-	81	37.692	ENSELUG00000008148	-	74	36.918
ENSELUG00000018970	-	81	42.857	ENSELUG00000021229	-	94	42.857
ENSELUG00000018970	-	96	34.202	ENSELUG00000018737	znf526	90	40.000
ENSELUG00000018970	-	93	34.967	ENSELUG00000020794	-	64	34.967
ENSELUG00000018970	-	97	42.787	ENSELUG00000018405	-	95	43.562
ENSELUG00000018970	-	78	41.463	ENSELUG00000005894	prdm5	67	37.104
ENSELUG00000018970	-	85	35.714	ENSELUG00000023702	PRDM15	51	34.343
ENSELUG00000018970	-	80	37.281	ENSELUG00000001909	-	79	35.165
ENSELUG00000018970	-	81	35.843	ENSELUG00000002844	-	57	35.843
ENSELUG00000018970	-	81	40.000	ENSELUG00000016933	gfi1b	53	40.000
ENSELUG00000018970	-	80	41.036	ENSELUG00000019204	-	93	44.538
ENSELUG00000018970	-	84	36.879	ENSELUG00000010470	-	56	36.879
ENSELUG00000018970	-	96	37.000	ENSELUG00000013796	-	94	34.271
ENSELUG00000018970	-	82	43.038	ENSELUG00000000281	-	96	43.529
ENSELUG00000018970	-	81	50.893	ENSELUG00000024007	-	82	50.476
ENSELUG00000018970	-	92	44.061	ENSELUG00000007694	-	91	41.987
ENSELUG00000018970	-	86	34.520	ENSELUG00000010993	znf319b	97	31.933
ENSELUG00000018970	-	83	39.053	ENSELUG00000009654	-	76	39.053
ENSELUG00000018970	-	83	35.347	ENSELUG00000006058	-	90	39.841
ENSELUG00000018970	-	81	41.420	ENSELUG00000013342	-	75	40.113
ENSELUG00000018970	-	81	44.048	ENSELUG00000017958	-	90	44.048
ENSELUG00000018970	-	82	36.527	ENSELUG00000011838	-	79	36.145
ENSELUG00000018970	-	85	39.483	ENSELUG00000013348	-	91	39.483
ENSELUG00000018970	-	99	63.115	ENSELUG00000019008	-	97	62.903
ENSELUG00000018970	-	76	38.362	ENSELUG00000021391	-	69	37.448
ENSELUG00000018970	-	80	43.056	ENSELUG00000008797	-	64	42.857
ENSELUG00000018970	-	80	43.439	ENSELUG00000022942	-	67	42.966
ENSELUG00000018970	-	80	43.929	ENSELUG00000013094	-	96	43.929
ENSELUG00000018970	-	82	45.455	ENSELUG00000019880	-	100	45.455
ENSELUG00000018970	-	84	44.853	ENSELUG00000013844	-	86	36.792
ENSELUG00000018970	-	80	39.776	ENSELUG00000021287	-	92	39.394
ENSELUG00000018970	-	90	42.308	ENSELUG00000021248	-	83	43.038
ENSELUG00000018970	-	82	50.000	ENSELUG00000021242	-	81	50.000
ENSELUG00000018970	-	96	41.018	ENSELUG00000009575	-	99	41.018
ENSELUG00000018970	-	89	44.776	ENSELUG00000012986	-	57	44.776
ENSELUG00000018970	-	99	35.700	ENSELUG00000013064	-	86	34.637
ENSELUG00000018970	-	84	42.350	ENSELUG00000000485	-	93	42.350
ENSELUG00000018970	-	80	45.052	ENSELUG00000012597	-	99	44.128
ENSELUG00000018970	-	99	40.149	ENSELUG00000021459	-	55	40.392

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000018970	-	89	41.315	ENSACAG00000026906	-	99	42.466	Anolis_carolinensis
ENSELUG00000018970	-	80	42.971	ENSACAG00000027001	-	97	42.971	Anolis_carolinensis
ENSELUG00000018970	-	81	42.857	ENSACAG00000026916	-	81	47.423	Anolis_carolinensis
ENSELUG00000018970	-	77	55.224	ENSAMXG00000038122	-	99	56.061	Astyanax_mexicanus
ENSELUG00000018970	-	94	40.690	ENSAMXG00000014745	-	94	40.690	Astyanax_mexicanus
ENSELUG00000018970	-	92	40.000	ENSDARG00000096614	si:dkey-182i3.10	68	36.923	Danio_rerio
ENSELUG00000018970	-	84	38.462	ENSGACG00000001523	-	99	38.462	Gasterosteus_aculeatus
ENSELUG00000018970	-	89	34.767	ENSHBUG00000016384	-	93	34.767	Haplochromis_burtoni
ENSELUG00000018970	-	80	43.448	ENSHCOG00000017456	-	93	43.448	Hippocampus_comes
ENSELUG00000018970	-	81	42.023	ENSHCOG00000001629	-	67	42.342	Hippocampus_comes
ENSELUG00000018970	-	81	41.270	ENSLBEG00000013235	-	84	41.270	Labrus_bergylta
ENSELUG00000018970	-	86	30.996	ENSMGAG00000016603	-	100	30.568	Meleagris_gallopavo
ENSELUG00000018970	-	82	38.976	ENSPNAG00000009176	-	88	38.976	Pygocentrus_nattereri
ENSELUG00000018970	-	80	39.498	ENSPNAG00000009184	-	83	39.954	Pygocentrus_nattereri
ENSELUG00000018970	-	92	43.885	ENSSFOG00015020993	-	78	42.857	Scleropages_formosus
ENSELUG00000018970	-	82	35.054	ENSTNIG00000000528	-	98	35.054	Tetraodon_nigroviridis
ENSELUG00000018970	-	92	38.565	ENSTNIG00000002343	-	98	39.362	Tetraodon_nigroviridis
ENSELUG00000018970	-	82	39.860	ENSXMAG00000020042	-	68	39.860	Xiphophorus_maculatus