EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000019033 (Gene tree)
Gene ID: 105023989
Gene Symbol: GFI1 (1 of many)
Alias: GFI-1|GFI1A|ZNF163
Full Name: zinc finger protein Gfi-1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 7379 bases
Position: chrLG03:8031192-8038570
Accession: 105023989
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000039021	zf-C2H2	PF00096.26	1.2e-24	1	5
ENSELUP00000039021	zf-C2H2	PF00096.26	1.2e-24	2	5
ENSELUP00000039021	zf-C2H2	PF00096.26	1.2e-24	3	5
ENSELUP00000039021	zf-C2H2	PF00096.26	1.2e-24	4	5
ENSELUP00000039021	zf-C2H2	PF00096.26	1.2e-24	5	5
ENSELUP00000039023	zf-C2H2	PF00096.26	1.2e-24	1	5
ENSELUP00000039023	zf-C2H2	PF00096.26	1.2e-24	2	5
ENSELUP00000039023	zf-C2H2	PF00096.26	1.2e-24	3	5
ENSELUP00000039023	zf-C2H2	PF00096.26	1.2e-24	4	5
ENSELUP00000039023	zf-C2H2	PF00096.26	1.2e-24	5	5
ENSELUP00000039021	zf-met	PF12874.7	0.00025	1	1
ENSELUP00000039023	zf-met	PF12874.7	0.00025	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000029964	GFI1 (1 of many)-201	1746	XM_010893591	ENSELUP00000039023	398 (aa)	XP_010891893	UPI000576C27E
ENSELUT00000041144	GFI1 (1 of many)-202	1414	XM_010893598	ENSELUP00000039021	398 (aa)	XP_010891900	UPI000576C27E

Gene Model

Click here to download ENSELUG00000019033's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000019033's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000019033	GFI1	73	39.604	ENSELUG00000000423	-	75	39.604
ENSELUG00000019033	GFI1	51	40.876	ENSELUG00000021381	-	67	40.876
ENSELUG00000019033	GFI1	64	39.024	ENSELUG00000022942	-	63	39.024
ENSELUG00000019033	GFI1	55	33.772	ENSELUG00000011316	-	54	33.772
ENSELUG00000019033	GFI1	60	45.455	ENSELUG00000017463	-	87	44.311
ENSELUG00000019033	GFI1	53	43.860	ENSELUG00000021499	-	87	43.860
ENSELUG00000019033	GFI1	50	41.429	ENSELUG00000019880	-	94	50.400
ENSELUG00000019033	GFI1	56	45.390	ENSELUG00000013094	-	98	43.709
ENSELUG00000019033	GFI1	54	73.611	ENSELUG00000016933	gfi1b	63	73.611
ENSELUG00000019033	GFI1	58	45.562	ENSELUG00000007694	-	86	45.562
ENSELUG00000019033	GFI1	100	64.677	ENSELUG00000003015	gfi1ab	99	64.428

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000019033	GFI1	100	59.390	ENSG00000162676	GFI1	100	59.624	Homo_sapiens
ENSELUG00000019033	GFI1	100	61.576	ENSAPOG00000015189	gfi1ab	100	61.330	Acanthochromis_polyacanthus
ENSELUG00000019033	GFI1	100	61.692	ENSACIG00000016354	gfi1ab	100	61.443	Amphilophus_citrinellus
ENSELUG00000019033	GFI1	100	40.741	ENSAOCG00000008339	gfi1ab	100	41.106	Amphiprion_ocellaris
ENSELUG00000019033	GFI1	100	62.069	ENSAPEG00000023870	gfi1ab	100	61.823	Amphiprion_percula
ENSELUG00000019033	GFI1	100	59.453	ENSATEG00000009167	gfi1ab	89	58.603	Anabas_testudineus
ENSELUG00000019033	GFI1	86	61.905	ENSAPLG00000015700	GFI1	99	61.905	Anas_platyrhynchos
ENSELUG00000019033	GFI1	100	61.165	ENSACAG00000004498	GFI1	100	61.463	Anolis_carolinensis
ENSELUG00000019033	GFI1	100	59.155	ENSANAG00000019656	GFI1	100	59.624	Aotus_nancymaae
ENSELUG00000019033	GFI1	100	62.255	ENSACLG00000026458	gfi1ab	93	62.010	Astatotilapia_calliptera
ENSELUG00000019033	GFI1	82	68.421	ENSAMXG00000006669	GFI1	99	68.421	Astyanax_mexicanus
ENSELUG00000019033	GFI1	100	61.290	ENSAMXG00000039600	gfi1ab	100	61.042	Astyanax_mexicanus
ENSELUG00000019033	GFI1	100	58.974	ENSBTAG00000016723	GFI1	100	59.670	Bos_taurus
ENSELUG00000019033	GFI1	100	59.390	ENSCJAG00000017609	GFI1	100	59.390	Callithrix_jacchus
ENSELUG00000019033	GFI1	100	58.140	ENSCAFG00000020155	GFI1	100	59.390	Canis_familiaris
ENSELUG00000019033	GFI1	100	58.140	ENSCAFG00020013371	GFI1	88	59.390	Canis_lupus_dingo
ENSELUG00000019033	GFI1	100	58.879	ENSCHIG00000016135	GFI1	100	59.112	Capra_hircus
ENSELUG00000019033	GFI1	100	59.906	ENSCPOG00000011727	GFI1	100	59.906	Cavia_porcellus
ENSELUG00000019033	GFI1	100	60.000	ENSCCAG00000036072	GFI1	100	60.000	Cebus_capucinus
ENSELUG00000019033	GFI1	100	59.390	ENSCATG00000037873	GFI1	100	59.624	Cercocebus_atys
ENSELUG00000019033	GFI1	83	85.340	ENSCLAG00000005915	GFI1	100	55.656	Chinchilla_lanigera
ENSELUG00000019033	GFI1	98	54.076	ENSCSAG00000001469	GFI1	100	54.348	Chlorocebus_sabaeus
ENSELUG00000019033	GFI1	100	59.155	ENSCANG00000034077	GFI1	100	59.390	Colobus_angolensis_palliatus
ENSELUG00000019033	GFI1	100	57.044	ENSCGRG00001015432	Gfi1	100	58.216	Cricetulus_griseus_chok1gshd
ENSELUG00000019033	GFI1	100	65.842	ENSCSEG00000017729	GFI1	100	65.842	Cynoglossus_semilaevis
ENSELUG00000019033	GFI1	100	62.657	ENSCVAG00000011828	gfi1ab	100	62.060	Cyprinodon_variegatus
ENSELUG00000019033	GFI1	100	60.732	ENSCVAG00000004930	GFI1	100	62.379	Cyprinodon_variegatus
ENSELUG00000019033	GFI1	100	67.250	ENSDARG00000044457	gfi1ab	100	67.250	Danio_rerio
ENSELUG00000019033	GFI1	100	58.933	ENSDNOG00000000782	GFI1	97	59.485	Dasypus_novemcinctus
ENSELUG00000019033	GFI1	100	59.005	ENSEASG00005015509	GFI1	86	59.059	Equus_asinus_asinus
ENSELUG00000019033	GFI1	98	51.005	ENSECAG00000006647	GFI1	86	53.951	Equus_caballus
ENSELUG00000019033	GFI1	100	57.346	ENSEEUG00000000198	GFI1	100	57.381	Erinaceus_europaeus
ENSELUG00000019033	GFI1	100	58.920	ENSFCAG00000005914	GFI1	100	59.155	Felis_catus
ENSELUG00000019033	GFI1	100	64.286	ENSFHEG00000000341	GFI1	100	64.286	Fundulus_heteroclitus
ENSELUG00000019033	GFI1	100	63.000	ENSFHEG00000010997	gfi1ab	100	62.155	Fundulus_heteroclitus
ENSELUG00000019033	GFI1	100	60.750	ENSGMOG00000007737	gfi1ab	100	60.750	Gadus_morhua
ENSELUG00000019033	GFI1	100	60.817	ENSGALG00000043650	GFI1	100	60.817	Gallus_gallus
ENSELUG00000019033	GFI1	100	63.145	ENSGAFG00000018063	GFI1	100	63.636	Gambusia_affinis
ENSELUG00000019033	GFI1	100	61.881	ENSGAFG00000016637	gfi1ab	100	61.634	Gambusia_affinis
ENSELUG00000019033	GFI1	100	61.290	ENSGACG00000004257	gfi1ab	97	61.500	Gasterosteus_aculeatus
ENSELUG00000019033	GFI1	100	59.390	ENSGGOG00000005320	GFI1	100	59.624	Gorilla_gorilla
ENSELUG00000019033	GFI1	100	62.035	ENSHBUG00000011969	gfi1ab	100	61.787	Haplochromis_burtoni
ENSELUG00000019033	GFI1	100	58.726	ENSHGLG00000008020	GFI1	100	58.726	Heterocephalus_glaber_female
ENSELUG00000019033	GFI1	100	58.726	ENSHGLG00100000610	GFI1	100	58.726	Heterocephalus_glaber_male
ENSELUG00000019033	GFI1	83	81.081	ENSHCOG00000019555	GFI1	98	81.081	Hippocampus_comes
ENSELUG00000019033	GFI1	100	55.819	ENSHCOG00000008590	gfi1ab	100	54.394	Hippocampus_comes
ENSELUG00000019033	GFI1	100	60.902	ENSIPUG00000010071	gfi1ab	87	60.902	Ictalurus_punctatus
ENSELUG00000019033	GFI1	100	63.750	ENSIPUG00000013414	GFI1	100	63.750	Ictalurus_punctatus
ENSELUG00000019033	GFI1	100	59.059	ENSSTOG00000014583	GFI1	100	59.059	Ictidomys_tridecemlineatus
ENSELUG00000019033	GFI1	100	61.654	ENSKMAG00000003810	gfi1ab	100	61.404	Kryptolebias_marmoratus
ENSELUG00000019033	GFI1	100	62.129	ENSLBEG00000027776	gfi1ab	100	61.881	Labrus_bergylta
ENSELUG00000019033	GFI1	100	64.938	ENSLACG00000013362	GFI1	98	64.938	Latimeria_chalumnae
ENSELUG00000019033	GFI1	99	47.291	ENSLACG00000017590	-	57	75.806	Latimeria_chalumnae
ENSELUG00000019033	GFI1	100	66.584	ENSLOCG00000004711	gfi1ab	100	66.584	Lepisosteus_oculatus
ENSELUG00000019033	GFI1	100	59.809	ENSLAFG00000018346	GFI1	100	60.048	Loxodonta_africana
ENSELUG00000019033	GFI1	100	59.390	ENSMFAG00000045801	GFI1	100	59.624	Macaca_fascicularis
ENSELUG00000019033	GFI1	100	59.390	ENSMNEG00000036338	GFI1	100	59.624	Macaca_nemestrina
ENSELUG00000019033	GFI1	100	59.390	ENSMLEG00000036181	GFI1	100	59.624	Mandrillus_leucophaeus
ENSELUG00000019033	GFI1	100	62.095	ENSMAMG00000008125	gfi1ab	100	61.845	Mastacembelus_armatus
ENSELUG00000019033	GFI1	100	62.255	ENSMZEG00005009895	gfi1ab	100	62.010	Maylandia_zebra
ENSELUG00000019033	GFI1	86	62.640	ENSMGAG00000008187	GFI1	99	62.640	Meleagris_gallopavo
ENSELUG00000019033	GFI1	100	57.746	ENSMICG00000047208	GFI1	100	58.451	Microcebus_murinus
ENSELUG00000019033	GFI1	100	60.150	ENSMMOG00000005556	gfi1ab	100	59.900	Mola_mola
ENSELUG00000019033	GFI1	100	60.514	ENSMODG00000011802	GFI1	100	60.142	Monodelphis_domestica
ENSELUG00000019033	GFI1	100	60.644	ENSMALG00000014672	gfi1ab	100	60.396	Monopterus_albus
ENSELUG00000019033	GFI1	100	57.845	MGP_CAROLIEiJ_G0027508	Gfi1	100	94.815	Mus_caroli
ENSELUG00000019033	GFI1	100	57.275	ENSMUSG00000029275	Gfi1	100	57.746	Mus_musculus
ENSELUG00000019033	GFI1	100	57.611	MGP_PahariEiJ_G0017280	Gfi1	100	94.815	Mus_pahari
ENSELUG00000019033	GFI1	100	57.845	MGP_SPRETEiJ_G0028507	Gfi1	100	57.506	Mus_spretus
ENSELUG00000019033	GFI1	100	60.000	ENSMPUG00000004178	GFI1	97	60.988	Mustela_putorius_furo
ENSELUG00000019033	GFI1	100	58.353	ENSMLUG00000015191	GFI1	97	58.178	Myotis_lucifugus
ENSELUG00000019033	GFI1	100	62.222	ENSNBRG00000015774	gfi1ab	100	61.975	Neolamprologus_brichardi
ENSELUG00000019033	GFI1	86	61.081	ENSNLEG00000010470	GFI1	93	60.858	Nomascus_leucogenys
ENSELUG00000019033	GFI1	100	58.451	ENSOPRG00000001473	GFI1	100	59.155	Ochotona_princeps
ENSELUG00000019033	GFI1	100	62.010	ENSONIG00000019246	gfi1ab	100	61.765	Oreochromis_niloticus
ENSELUG00000019033	GFI1	98	51.200	ENSOCUG00000023553	GFI1	93	52.703	Oryctolagus_cuniculus
ENSELUG00000019033	GFI1	100	60.902	ENSORLG00000013806	gfi1ab	100	60.302	Oryzias_latipes
ENSELUG00000019033	GFI1	100	60.599	ENSORLG00000005060	GFI1	100	60.599	Oryzias_latipes
ENSELUG00000019033	GFI1	82	72.000	ENSORLG00020002817	GFI1	100	72.000	Oryzias_latipes_hni
ENSELUG00000019033	GFI1	100	61.097	ENSORLG00020001602	gfi1ab	100	60.500	Oryzias_latipes_hni
ENSELUG00000019033	GFI1	100	59.506	ENSORLG00015006070	GFI1	100	59.506	Oryzias_latipes_hsok
ENSELUG00000019033	GFI1	100	62.069	ENSOMEG00000016722	GFI1	100	63.158	Oryzias_melastigma
ENSELUG00000019033	GFI1	100	59.352	ENSOGAG00000027913	GFI1	100	59.352	Otolemur_garnettii
ENSELUG00000019033	GFI1	100	60.750	ENSPPAG00000042186	GFI1	100	60.750	Pan_paniscus
ENSELUG00000019033	GFI1	100	58.920	ENSPPRG00000007521	GFI1	100	59.155	Panthera_pardus
ENSELUG00000019033	GFI1	100	59.624	ENSPTRG00000043053	GFI1	100	59.859	Pan_troglodytes
ENSELUG00000019033	GFI1	100	59.390	ENSPANG00000016433	GFI1	100	59.624	Papio_anubis
ENSELUG00000019033	GFI1	100	67.822	ENSPKIG00000004263	GFI1	100	67.574	Paramormyrops_kingsleyae
ENSELUG00000019033	GFI1	88	63.056	ENSPSIG00000008734	GFI1	99	63.056	Pelodiscus_sinensis
ENSELUG00000019033	GFI1	100	62.250	ENSPMGG00000012546	gfi1ab	100	62.250	Periophthalmus_magnuspinnatus
ENSELUG00000019033	GFI1	99	54.177	ENSPMGG00000011041	GFI1	99	54.430	Periophthalmus_magnuspinnatus
ENSELUG00000019033	GFI1	100	60.890	ENSPCIG00000013728	GFI1	100	60.941	Phascolarctos_cinereus
ENSELUG00000019033	GFI1	67	44.245	ENSPFOG00000024581	-	85	44.245	Poecilia_formosa
ENSELUG00000019033	GFI1	100	62.687	ENSPFOG00000023214	gfi1ab	100	62.438	Poecilia_formosa
ENSELUG00000019033	GFI1	100	63.971	ENSPLAG00000005376	GFI1	91	64.216	Poecilia_latipinna
ENSELUG00000019033	GFI1	84	83.784	ENSPLAG00000010879	gfi1ab	100	62.438	Poecilia_latipinna
ENSELUG00000019033	GFI1	100	64.356	ENSPMEG00000019299	GFI1	100	64.356	Poecilia_mexicana
ENSELUG00000019033	GFI1	100	62.935	ENSPMEG00000013694	gfi1ab	100	62.687	Poecilia_mexicana
ENSELUG00000019033	GFI1	100	53.555	ENSPREG00000007997	GFI1	100	55.714	Poecilia_reticulata
ENSELUG00000019033	GFI1	100	62.750	ENSPREG00000014097	gfi1ab	100	62.500	Poecilia_reticulata
ENSELUG00000019033	GFI1	100	47.786	ENSPCAG00000011020	GFI1	100	48.485	Procavia_capensis
ENSELUG00000019033	GFI1	100	58.140	ENSPCOG00000020540	GFI1	100	59.016	Propithecus_coquereli
ENSELUG00000019033	GFI1	100	58.907	ENSPVAG00000006928	GFI1	100	58.962	Pteropus_vampyrus
ENSELUG00000019033	GFI1	100	62.255	ENSPNYG00000021183	gfi1ab	100	62.010	Pundamilia_nyererei
ENSELUG00000019033	GFI1	100	57.074	ENSPNAG00000028014	GFI1	100	55.990	Pygocentrus_nattereri
ENSELUG00000019033	GFI1	100	62.500	ENSPNAG00000027258	gfi1ab	100	62.250	Pygocentrus_nattereri
ENSELUG00000019033	GFI1	100	57.506	ENSRNOG00000002042	Gfi1	100	57.506	Rattus_norvegicus
ENSELUG00000019033	GFI1	100	59.390	ENSRBIG00000036467	GFI1	100	59.390	Rhinopithecus_bieti
ENSELUG00000019033	GFI1	100	59.390	ENSRROG00000031687	GFI1	100	59.390	Rhinopithecus_roxellana
ENSELUG00000019033	GFI1	100	59.390	ENSSBOG00000031300	GFI1	100	59.859	Saimiri_boliviensis_boliviensis
ENSELUG00000019033	GFI1	100	66.915	ENSSFOG00015020295	gfi1	100	66.667	Scleropages_formosus
ENSELUG00000019033	GFI1	100	61.029	ENSSMAG00000002782	gfi1ab	100	60.784	Scophthalmus_maximus
ENSELUG00000019033	GFI1	100	61.290	ENSSDUG00000022410	gfi1ab	100	61.290	Seriola_dumerili
ENSELUG00000019033	GFI1	100	61.042	ENSSLDG00000020163	gfi1ab	100	61.042	Seriola_lalandi_dorsalis
ENSELUG00000019033	GFI1	79	81.250	ENSSPAG00000009140	gfi1ab	99	81.250	Stegastes_partitus
ENSELUG00000019033	GFI1	100	60.238	ENSSSCG00000006902	GFI1	100	60.476	Sus_scrofa
ENSELUG00000019033	GFI1	85	63.352	ENSTGUG00000006060	GFI1	98	63.352	Taeniopygia_guttata
ENSELUG00000019033	GFI1	100	61.153	ENSTRUG00000000415	gfi1ab	100	60.902	Takifugu_rubripes
ENSELUG00000019033	GFI1	100	57.869	ENSTNIG00000000651	gfi1ab	97	60.644	Tetraodon_nigroviridis
ENSELUG00000019033	GFI1	100	58.531	ENSTTRG00000000082	GFI1	100	59.005	Tursiops_truncatus
ENSELUG00000019033	GFI1	100	59.564	ENSUAMG00000021124	GFI1	91	60.048	Ursus_americanus
ENSELUG00000019033	GFI1	100	61.386	ENSXETG00000023006	gfi1	98	61.386	Xenopus_tropicalis
ENSELUG00000019033	GFI1	100	59.544	ENSXMAG00000009274	GFI1	70	59.544	Xiphophorus_maculatus
ENSELUG00000019033	GFI1	100	62.250	ENSXMAG00000010523	gfi1ab	100	62.000	Xiphophorus_maculatus