EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000019098 (Gene tree)
Gene ID: 105025675
Gene Symbol: blm
Alias: -
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 13686 bases
Position: chrLG19:22461753-22475438
Accession: 105025675
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000019799	HRDC	PF00570.23	1.1e-13	1	1
ENSELUP00000019791	HRDC	PF00570.23	1.1e-13	1	1
ENSELUP00000019799	BDHCT	PF08072.11	2.8e-17	1	1
ENSELUP00000019791	BDHCT	PF08072.11	2.9e-17	1	1
ENSELUP00000019799	DEAD	PF00270.29	4.9e-18	1	1
ENSELUP00000019791	DEAD	PF00270.29	5.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000041167	-	4659	XM_010896518	ENSELUP00000019791	1473 (aa)	XP_010894820	UPI0009732C54
ENSELUT00000030032	-	5453	-	ENSELUP00000019799	1429 (aa)	-	-

Gene Model

Click here to download ENSELUG00000019098's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03440	Homologous recombination	KEGG
els03460	Fanconi anemia pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000019098's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000019098	blm	50	75.820	ENSG00000197299	BLM	89	75.820	Homo_sapiens
ENSELUG00000019098	blm	99	58.753	ENSAPOG00000017966	blm	96	65.128	Acanthochromis_polyacanthus
ENSELUG00000019098	blm	68	66.162	ENSAMEG00000013843	BLM	76	66.162	Ailuropoda_melanoleuca
ENSELUG00000019098	blm	99	60.204	ENSACIG00000023762	blm	99	60.272	Amphilophus_citrinellus
ENSELUG00000019098	blm	99	57.114	ENSAOCG00000003318	blm	99	57.912	Amphiprion_ocellaris
ENSELUG00000019098	blm	99	58.792	ENSAPEG00000018105	blm	99	59.219	Amphiprion_percula
ENSELUG00000019098	blm	99	61.860	ENSATEG00000006421	blm	100	62.004	Anabas_testudineus
ENSELUG00000019098	blm	78	52.733	ENSAPLG00000006878	BLM	69	63.270	Anas_platyrhynchos
ENSELUG00000019098	blm	70	54.936	ENSACAG00000014275	BLM	58	62.278	Anolis_carolinensis
ENSELUG00000019098	blm	50	75.205	ENSANAG00000038415	BLM	82	75.205	Aotus_nancymaae
ENSELUG00000019098	blm	99	58.839	ENSACLG00000020354	blm	99	59.920	Astatotilapia_calliptera
ENSELUG00000019098	blm	99	58.075	ENSAMXG00000016970	blm	99	59.250	Astyanax_mexicanus
ENSELUG00000019098	blm	77	81.301	ENSBTAG00000020301	BLM	83	81.301	Bos_taurus
ENSELUG00000019098	blm	56	36.523	WBGene00001865	him-6	79	37.531	Caenorhabditis_elegans
ENSELUG00000019098	blm	78	54.537	ENSCJAG00000009803	BLM	82	75.410	Callithrix_jacchus
ENSELUG00000019098	blm	71	64.817	ENSCAFG00000012385	BLM	77	65.404	Canis_familiaris
ENSELUG00000019098	blm	62	74.795	ENSCAFG00020016111	BLM	88	68.033	Canis_lupus_dingo
ENSELUG00000019098	blm	56	81.301	ENSCHIG00000010329	BLM	83	81.301	Capra_hircus
ENSELUG00000019098	blm	84	67.044	ENSTSYG00000012368	BLM	83	75.000	Carlito_syrichta
ENSELUG00000019098	blm	58	71.057	ENSCAPG00000017976	BLM	70	71.057	Cavia_aperea
ENSELUG00000019098	blm	55	65.789	ENSCPOG00000001761	BLM	59	64.371	Cavia_porcellus
ENSELUG00000019098	blm	59	66.329	ENSCCAG00000023069	BLM	82	75.410	Cebus_capucinus
ENSELUG00000019098	blm	59	66.456	ENSCATG00000040609	BLM	87	75.410	Cercocebus_atys
ENSELUG00000019098	blm	56	64.388	ENSCLAG00000012111	BLM	82	52.322	Chinchilla_lanigera
ENSELUG00000019098	blm	59	65.704	ENSCSAG00000017040	BLM	88	66.625	Chlorocebus_sabaeus
ENSELUG00000019098	blm	55	59.722	ENSCHOG00000006255	BLM	59	59.722	Choloepus_hoffmanni
ENSELUG00000019098	blm	78	52.600	ENSCPBG00000025000	BLM	80	64.034	Chrysemys_picta_bellii
ENSELUG00000019098	blm	54	67.424	ENSCGRG00001024897	Blm	84	67.424	Cricetulus_griseus_chok1gshd
ENSELUG00000019098	blm	93	57.803	ENSCSEG00000013483	blm	99	57.567	Cynoglossus_semilaevis
ENSELUG00000019098	blm	65	71.951	ENSCVAG00000017583	blm	83	90.909	Cyprinodon_variegatus
ENSELUG00000019098	blm	99	59.331	ENSDARG00000077089	blm	100	59.227	Danio_rerio
ENSELUG00000019098	blm	59	67.901	ENSDNOG00000010159	BLM	83	65.365	Dasypus_novemcinctus
ENSELUG00000019098	blm	50	42.375	FBgn0002906	Blm	52	41.080	Drosophila_melanogaster
ENSELUG00000019098	blm	51	65.021	ENSEASG00005006727	BLM	80	49.744	Equus_asinus_asinus
ENSELUG00000019098	blm	51	69.136	ENSECAG00000011405	BLM	55	66.413	Equus_caballus
ENSELUG00000019098	blm	60	66.892	ENSEEUG00000001434	BLM	66	64.392	Erinaceus_europaeus
ENSELUG00000019098	blm	59	74.795	ENSFCAG00000006087	BLM	74	74.795	Felis_catus
ENSELUG00000019098	blm	58	59.659	ENSFALG00000010981	BLM	77	61.374	Ficedula_albicollis
ENSELUG00000019098	blm	92	61.980	ENSFDAG00000012658	BLM	99	59.672	Fukomys_damarensis
ENSELUG00000019098	blm	99	57.324	ENSFHEG00000002553	blm	99	57.940	Fundulus_heteroclitus
ENSELUG00000019098	blm	99	55.601	ENSGMOG00000016431	blm	98	67.349	Gadus_morhua
ENSELUG00000019098	blm	78	51.525	ENSGALG00000008256	BLM	57	64.250	Gallus_gallus
ENSELUG00000019098	blm	85	73.585	ENSGAFG00000001117	blm	93	73.585	Gambusia_affinis
ENSELUG00000019098	blm	99	57.764	ENSGACG00000010863	blm	99	84.030	Gasterosteus_aculeatus
ENSELUG00000019098	blm	63	56.940	ENSGAGG00000005383	BLM	82	72.964	Gopherus_agassizii
ENSELUG00000019098	blm	59	66.877	ENSGGOG00000007710	BLM	82	75.820	Gorilla_gorilla
ENSELUG00000019098	blm	99	58.890	ENSHBUG00000015943	blm	99	59.906	Haplochromis_burtoni
ENSELUG00000019098	blm	59	66.080	ENSHGLG00000013231	BLM	84	66.080	Heterocephalus_glaber_female
ENSELUG00000019098	blm	71	65.819	ENSHCOG00000011455	blm	99	65.921	Hippocampus_comes
ENSELUG00000019098	blm	60	75.845	ENSIPUG00000000529	blm	77	73.436	Ictalurus_punctatus
ENSELUG00000019098	blm	50	69.764	ENSSTOG00000005000	BLM	86	69.764	Ictidomys_tridecemlineatus
ENSELUG00000019098	blm	51	62.517	ENSJJAG00000016322	Blm	74	60.000	Jaculus_jaculus
ENSELUG00000019098	blm	99	57.923	ENSKMAG00000016608	blm	99	58.942	Kryptolebias_marmoratus
ENSELUG00000019098	blm	59	71.429	ENSLBEG00000018729	blm	96	71.429	Labrus_bergylta
ENSELUG00000019098	blm	83	68.546	ENSLACG00000006490	BLM	89	68.546	Latimeria_chalumnae
ENSELUG00000019098	blm	99	51.912	ENSLOCG00000014302	blm	96	58.844	Lepisosteus_oculatus
ENSELUG00000019098	blm	50	75.410	ENSMFAG00000042982	BLM	87	75.410	Macaca_fascicularis
ENSELUG00000019098	blm	50	75.410	ENSMMUG00000019526	BLM	87	75.410	Macaca_mulatta
ENSELUG00000019098	blm	54	66.203	ENSMNEG00000031251	BLM	75	78.689	Macaca_nemestrina
ENSELUG00000019098	blm	59	62.817	ENSMLEG00000032934	BLM	88	63.118	Mandrillus_leucophaeus
ENSELUG00000019098	blm	99	58.464	ENSMAMG00000008726	blm	99	58.668	Mastacembelus_armatus
ENSELUG00000019098	blm	99	59.112	ENSMZEG00005022323	blm	99	59.381	Maylandia_zebra
ENSELUG00000019098	blm	58	70.166	ENSMAUG00000008953	Blm	63	66.877	Mesocricetus_auratus
ENSELUG00000019098	blm	58	74.385	ENSMICG00000034442	BLM	82	74.385	Microcebus_murinus
ENSELUG00000019098	blm	83	67.468	ENSMOCG00000016367	Blm	84	67.468	Microtus_ochrogaster
ENSELUG00000019098	blm	99	58.423	ENSMMOG00000006959	blm	99	58.423	Mola_mola
ENSELUG00000019098	blm	54	65.909	ENSMODG00000019449	BLM	54	65.909	Monodelphis_domestica
ENSELUG00000019098	blm	99	60.041	ENSMALG00000007323	blm	99	60.068	Monopterus_albus
ENSELUG00000019098	blm	58	69.848	MGP_CAROLIEiJ_G0029907	Blm	63	66.456	Mus_caroli
ENSELUG00000019098	blm	83	66.456	ENSMUSG00000030528	Blm	63	66.456	Mus_musculus
ENSELUG00000019098	blm	83	66.793	MGP_PahariEiJ_G0013129	Blm	84	67.045	Mus_pahari
ENSELUG00000019098	blm	83	66.498	MGP_SPRETEiJ_G0031009	Blm	84	66.498	Mus_spretus
ENSELUG00000019098	blm	56	69.168	ENSMLUG00000014697	BLM	67	65.829	Myotis_lucifugus
ENSELUG00000019098	blm	83	65.909	ENSNGAG00000001275	Blm	84	65.952	Nannospalax_galili
ENSELUG00000019098	blm	99	59.364	ENSNBRG00000019702	blm	99	59.635	Neolamprologus_brichardi
ENSELUG00000019098	blm	72	52.070	ENSNLEG00000012087	BLM	99	52.801	Nomascus_leucogenys
ENSELUG00000019098	blm	52	62.159	ENSMEUG00000007253	BLM	66	62.402	Notamacropus_eugenii
ENSELUG00000019098	blm	50	65.854	ENSOPRG00000011667	BLM	57	69.865	Ochotona_princeps
ENSELUG00000019098	blm	54	61.335	ENSODEG00000015373	BLM	75	61.083	Octodon_degus
ENSELUG00000019098	blm	62	70.562	ENSONIG00000015193	blm	99	58.052	Oreochromis_niloticus
ENSELUG00000019098	blm	50	68.985	ENSOANG00000009316	-	100	65.773	Ornithorhynchus_anatinus
ENSELUG00000019098	blm	83	64.943	ENSOCUG00000013969	BLM	84	65.239	Oryctolagus_cuniculus
ENSELUG00000019098	blm	99	58.744	ENSORLG00000008110	blm	99	58.990	Oryzias_latipes
ENSELUG00000019098	blm	99	58.451	ENSORLG00020004812	blm	99	58.697	Oryzias_latipes_hni
ENSELUG00000019098	blm	99	58.947	ENSORLG00015018640	blm	99	64.935	Oryzias_latipes_hsok
ENSELUG00000019098	blm	99	58.114	ENSOMEG00000023545	blm	99	58.384	Oryzias_melastigma
ENSELUG00000019098	blm	55	73.252	ENSOGAG00000005708	BLM	76	64.356	Otolemur_garnettii
ENSELUG00000019098	blm	61	68.904	ENSOARG00000012875	BLM	84	66.119	Ovis_aries
ENSELUG00000019098	blm	50	75.615	ENSPPAG00000032173	BLM	99	46.950	Pan_paniscus
ENSELUG00000019098	blm	61	68.250	ENSPPRG00000002471	BLM	75	74.795	Panthera_pardus
ENSELUG00000019098	blm	55	74.542	ENSPTIG00000016168	BLM	75	74.542	Panthera_tigris_altaica
ENSELUG00000019098	blm	50	75.359	ENSPTRG00000007460	BLM	89	75.359	Pan_troglodytes
ENSELUG00000019098	blm	59	66.456	ENSPANG00000018572	BLM	87	75.410	Papio_anubis
ENSELUG00000019098	blm	99	56.839	ENSPKIG00000008954	blm	99	57.029	Paramormyrops_kingsleyae
ENSELUG00000019098	blm	54	75.000	ENSPMGG00000006629	blm	86	75.000	Periophthalmus_magnuspinnatus
ENSELUG00000019098	blm	58	70.596	ENSPEMG00000017348	Blm	69	67.595	Peromyscus_maniculatus_bairdii
ENSELUG00000019098	blm	77	51.718	ENSPCIG00000006609	BLM	66	65.504	Phascolarctos_cinereus
ENSELUG00000019098	blm	99	53.795	ENSPFOG00000005059	blm	99	55.780	Poecilia_formosa
ENSELUG00000019098	blm	99	53.908	ENSPLAG00000017344	blm	99	55.758	Poecilia_latipinna
ENSELUG00000019098	blm	99	55.474	ENSPMEG00000000321	blm	99	56.980	Poecilia_mexicana
ENSELUG00000019098	blm	99	56.091	ENSPREG00000007715	blm	99	57.038	Poecilia_reticulata
ENSELUG00000019098	blm	59	65.063	ENSPPYG00000006784	BLM	99	46.419	Pongo_abelii
ENSELUG00000019098	blm	59	65.625	ENSPCAG00000008960	BLM	63	63.079	Procavia_capensis
ENSELUG00000019098	blm	87	50.000	ENSPCOG00000000439	BLM	82	60.656	Propithecus_coquereli
ENSELUG00000019098	blm	59	78.033	ENSPVAG00000011642	BLM	62	78.033	Pteropus_vampyrus
ENSELUG00000019098	blm	87	77.165	ENSPNYG00000010956	blm	95	73.868	Pundamilia_nyererei
ENSELUG00000019098	blm	99	58.835	ENSPNAG00000011714	blm	99	59.205	Pygocentrus_nattereri
ENSELUG00000019098	blm	83	66.498	ENSRNOG00000011213	Blm	84	66.498	Rattus_norvegicus
ENSELUG00000019098	blm	59	68.091	ENSRBIG00000029656	BLM	82	74.898	Rhinopithecus_bieti
ENSELUG00000019098	blm	59	66.751	ENSRROG00000037871	BLM	83	74.898	Rhinopithecus_roxellana
ENSELUG00000019098	blm	50	75.410	ENSSBOG00000030957	BLM	86	75.410	Saimiri_boliviensis_boliviensis
ENSELUG00000019098	blm	60	68.219	ENSSHAG00000007988	BLM	78	65.000	Sarcophilus_harrisii
ENSELUG00000019098	blm	61	72.229	ENSSFOG00015015462	blm	88	72.418	Scleropages_formosus
ENSELUG00000019098	blm	99	57.827	ENSSMAG00000001120	blm	99	58.271	Scophthalmus_maximus
ENSELUG00000019098	blm	99	59.506	ENSSDUG00000010955	blm	99	60.404	Seriola_dumerili
ENSELUG00000019098	blm	99	60.242	ENSSLDG00000000634	blm	99	60.242	Seriola_lalandi_dorsalis
ENSELUG00000019098	blm	54	60.354	ENSSARG00000006398	BLM	59	60.480	Sorex_araneus
ENSELUG00000019098	blm	73	52.355	ENSSPUG00000000013	BLM	69	64.106	Sphenodon_punctatus
ENSELUG00000019098	blm	99	60.459	ENSSPAG00000013999	blm	99	60.717	Stegastes_partitus
ENSELUG00000019098	blm	59	69.848	ENSSSCG00000001816	BLM	83	70.028	Sus_scrofa
ENSELUG00000019098	blm	82	71.429	ENSTRUG00000019860	blm	99	56.592	Takifugu_rubripes
ENSELUG00000019098	blm	92	63.762	ENSTNIG00000019246	blm	99	57.104	Tetraodon_nigroviridis
ENSELUG00000019098	blm	54	66.373	ENSTTRG00000016386	BLM	55	66.247	Tursiops_truncatus
ENSELUG00000019098	blm	58	75.410	ENSUMAG00000009105	BLM	96	68.904	Ursus_maritimus
ENSELUG00000019098	blm	60	61.923	ENSVPAG00000000085	BLM	84	62.030	Vicugna_pacos
ENSELUG00000019098	blm	64	79.675	ENSVVUG00000006402	BLM	74	79.675	Vulpes_vulpes
ENSELUG00000019098	blm	99	46.680	ENSXETG00000007847	blm	68	67.043	Xenopus_tropicalis
ENSELUG00000019098	blm	99	54.558	ENSXCOG00000020227	blm	99	55.392	Xiphophorus_couchianus
ENSELUG00000019098	blm	99	56.911	ENSXMAG00000002951	blm	99	57.404	Xiphophorus_maculatus