EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000019144 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 1104 bases
Position: chrLG25:7476564-7477667
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000039118	zf-C2H2	PF00096.26	5.7e-17	1	3
ENSELUP00000039118	zf-C2H2	PF00096.26	5.7e-17	2	3
ENSELUP00000039118	zf-C2H2	PF00096.26	5.7e-17	3	3
ENSELUP00000039118	zf-met	PF12874.7	2.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000041210	-	276	-	ENSELUP00000039118	91 (aa)	-	-

Gene Model

Click here to download ENSELUG00000019144's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000019144's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000019144	-	90	50.000	ENSELUG00000021220	-	73	50.000
ENSELUG00000019144	-	97	46.269	ENSELUG00000000281	-	54	46.269
ENSELUG00000019144	-	96	45.455	ENSELUG00000010279	-	81	45.455

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000019144	-	97	48.780	ENSAMEG00000003802	-	59	48.780	Ailuropoda_melanoleuca
ENSELUG00000019144	-	96	47.253	ENSACIG00000009128	-	70	47.253	Amphilophus_citrinellus
ENSELUG00000019144	-	100	48.193	ENSACIG00000003515	-	86	45.238	Amphilophus_citrinellus
ENSELUG00000019144	-	95	44.828	ENSAOCG00000024256	-	89	44.828	Amphiprion_ocellaris
ENSELUG00000019144	-	96	41.071	ENSAPEG00000005378	-	98	41.071	Amphiprion_percula
ENSELUG00000019144	-	96	53.521	ENSACLG00000017849	-	58	48.864	Astatotilapia_calliptera
ENSELUG00000019144	-	91	50.000	ENSACLG00000004663	-	52	50.000	Astatotilapia_calliptera
ENSELUG00000019144	-	96	56.250	ENSCSEG00000007055	-	59	56.250	Cynoglossus_semilaevis
ENSELUG00000019144	-	99	49.383	ENSCVAG00000021107	-	65	49.123	Cyprinodon_variegatus
ENSELUG00000019144	-	96	44.444	ENSFHEG00000011200	-	88	44.444	Fundulus_heteroclitus
ENSELUG00000019144	-	85	45.570	ENSKMAG00000007672	-	61	45.570	Kryptolebias_marmoratus
ENSELUG00000019144	-	97	43.678	ENSMZEG00005023920	-	50	43.678	Maylandia_zebra
ENSELUG00000019144	-	92	54.545	ENSMZEG00005024426	-	61	54.545	Maylandia_zebra
ENSELUG00000019144	-	92	46.429	ENSMMOG00000002211	-	96	46.429	Mola_mola
ENSELUG00000019144	-	91	56.818	ENSPMGG00000006070	-	67	52.381	Periophthalmus_magnuspinnatus
ENSELUG00000019144	-	95	46.988	ENSPMGG00000005349	-	60	46.988	Periophthalmus_magnuspinnatus
ENSELUG00000019144	-	96	43.373	ENSPMGG00000015837	-	93	43.373	Periophthalmus_magnuspinnatus
ENSELUG00000019144	-	100	42.000	ENSPMGG00000004812	-	80	42.000	Periophthalmus_magnuspinnatus
ENSELUG00000019144	-	92	45.833	ENSPMAG00000005692	-	64	45.833	Petromyzon_marinus
ENSELUG00000019144	-	99	50.909	ENSPREG00000019161	-	91	48.000	Poecilia_reticulata
ENSELUG00000019144	-	91	46.988	ENSPREG00000021924	-	72	46.988	Poecilia_reticulata
ENSELUG00000019144	-	93	45.783	ENSPNAG00000000488	-	91	45.783	Pygocentrus_nattereri
ENSELUG00000019144	-	95	49.180	ENSSMAG00000009609	-	82	41.818	Scophthalmus_maximus
ENSELUG00000019144	-	95	44.444	ENSSDUG00000004867	-	97	44.444	Seriola_dumerili
ENSELUG00000019144	-	92	42.647	ENSSLDG00000015049	-	90	42.647	Seriola_lalandi_dorsalis
ENSELUG00000019144	-	99	48.387	ENSXMAG00000026679	-	77	45.000	Xiphophorus_maculatus