EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000019154 (Gene tree)
Gene ID: 105014983
Gene Symbol: smarcad1b
Alias: si:dkey-76p7.6
Full Name: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1B
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 15712 bases
Position: chrLG14:10741231-10756942
Accession: 105014983
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000019867	ResIII	PF04851.15	1.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000041212	-	6345	XM_010877741	ENSELUP00000019867	981 (aa)	XP_010876043	-

Gene Model

Click here to download ENSELUG00000019154's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000019154's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000019154	smarcad1b	52	33.272	ENSELUG00000014909	hells	62	33.272
ENSELUG00000019154	smarcad1b	55	34.307	ENSELUG00000014653	SMARCA5	50	34.307
ENSELUG00000019154	smarcad1b	51	31.061	ENSELUG00000009287	rad54b	52	31.061
ENSELUG00000019154	smarcad1b	86	60.923	ENSELUG00000018535	smarcad1a	84	62.399

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000019154	smarcad1b	79	58.824	ENSG00000163104	SMARCAD1	98	65.812	Homo_sapiens
ENSELUG00000019154	smarcad1b	75	71.072	ENSAPOG00000011446	smarcad1a	72	71.072	Acanthochromis_polyacanthus
ENSELUG00000019154	smarcad1b	79	59.207	ENSAMEG00000005844	SMARCAD1	79	56.727	Ailuropoda_melanoleuca
ENSELUG00000019154	smarcad1b	70	75.624	ENSACIG00000018326	smarcad1a	95	70.392	Amphilophus_citrinellus
ENSELUG00000019154	smarcad1b	76	71.366	ENSAOCG00000019762	smarcad1a	72	71.366	Amphiprion_ocellaris
ENSELUG00000019154	smarcad1b	83	71.366	ENSAPEG00000003889	smarcad1a	72	71.366	Amphiprion_percula
ENSELUG00000019154	smarcad1b	76	70.160	ENSATEG00000015608	smarcad1a	89	68.892	Anabas_testudineus
ENSELUG00000019154	smarcad1b	83	56.522	ENSAPLG00000004630	SMARCAD1	84	56.988	Anas_platyrhynchos
ENSELUG00000019154	smarcad1b	83	55.893	ENSACAG00000013554	SMARCAD1	92	51.674	Anolis_carolinensis
ENSELUG00000019154	smarcad1b	79	58.440	ENSANAG00000020488	SMARCAD1	89	56.590	Aotus_nancymaae
ENSELUG00000019154	smarcad1b	78	70.235	ENSACLG00000017063	smarcad1a	84	61.700	Astatotilapia_calliptera
ENSELUG00000019154	smarcad1b	70	64.783	ENSAMXG00000015470	smarcad1a	97	64.689	Astyanax_mexicanus
ENSELUG00000019154	smarcad1b	92	63.844	ENSAMXG00000019130	smarcad1b	97	64.783	Astyanax_mexicanus
ENSELUG00000019154	smarcad1b	79	58.673	ENSBTAG00000017061	SMARCAD1	79	56.348	Bos_taurus
ENSELUG00000019154	smarcad1b	65	38.700	WBGene00010845	M03C11.8	66	38.754	Caenorhabditis_elegans
ENSELUG00000019154	smarcad1b	79	58.440	ENSCJAG00000006778	SMARCAD1	79	56.590	Callithrix_jacchus
ENSELUG00000019154	smarcad1b	79	59.335	ENSCAFG00000010026	SMARCAD1	79	56.848	Canis_familiaris
ENSELUG00000019154	smarcad1b	79	59.335	ENSCAFG00020003994	SMARCAD1	91	56.848	Canis_lupus_dingo
ENSELUG00000019154	smarcad1b	79	58.951	ENSCHIG00000012905	SMARCAD1	79	56.606	Capra_hircus
ENSELUG00000019154	smarcad1b	79	58.333	ENSTSYG00000002706	SMARCAD1	79	56.364	Carlito_syrichta
ENSELUG00000019154	smarcad1b	78	52.618	ENSCAPG00000016744	SMARCAD1	94	49.661	Cavia_aperea
ENSELUG00000019154	smarcad1b	79	59.207	ENSCPOG00000011398	SMARCAD1	75	58.555	Cavia_porcellus
ENSELUG00000019154	smarcad1b	79	58.440	ENSCCAG00000022264	SMARCAD1	98	65.812	Cebus_capucinus
ENSELUG00000019154	smarcad1b	79	58.824	ENSCATG00000035663	SMARCAD1	91	56.953	Cercocebus_atys
ENSELUG00000019154	smarcad1b	79	58.824	ENSCSAG00000004186	SMARCAD1	96	56.953	Chlorocebus_sabaeus
ENSELUG00000019154	smarcad1b	93	51.141	ENSCPBG00000013203	SMARCAD1	93	50.598	Chrysemys_picta_bellii
ENSELUG00000019154	smarcad1b	65	48.466	ENSCING00000001688	-	97	48.466	Ciona_intestinalis
ENSELUG00000019154	smarcad1b	79	58.824	ENSCANG00000003556	SMARCAD1	98	65.812	Colobus_angolensis_palliatus
ENSELUG00000019154	smarcad1b	83	56.848	ENSCGRG00001015056	Smarcad1	79	56.848	Cricetulus_griseus_chok1gshd
ENSELUG00000019154	smarcad1b	83	56.848	ENSCGRG00000014087	Smarcad1	79	56.848	Cricetulus_griseus_crigri
ENSELUG00000019154	smarcad1b	75	69.313	ENSCSEG00000014419	-	74	69.313	Cynoglossus_semilaevis
ENSELUG00000019154	smarcad1b	73	70.216	ENSCSEG00000017903	smarcad1a	72	70.076	Cynoglossus_semilaevis
ENSELUG00000019154	smarcad1b	92	61.489	ENSDARG00000073721	smarcad1b	96	61.653	Danio_rerio
ENSELUG00000019154	smarcad1b	79	59.950	ENSDARG00000014041	smarcad1a	84	58.463	Danio_rerio
ENSELUG00000019154	smarcad1b	79	58.696	ENSDNOG00000000806	-	79	56.832	Dasypus_novemcinctus
ENSELUG00000019154	smarcad1b	79	59.079	ENSDORG00000012331	Smarcad1	79	57.488	Dipodomys_ordii
ENSELUG00000019154	smarcad1b	63	43.222	FBgn0032157	Etl1	78	42.105	Drosophila_melanogaster
ENSELUG00000019154	smarcad1b	64	47.013	ENSEBUG00000003969	smarcad1a	98	46.226	Eptatretus_burgeri
ENSELUG00000019154	smarcad1b	87	52.525	ENSEASG00005012382	SMARCAD1	78	60.253	Equus_asinus_asinus
ENSELUG00000019154	smarcad1b	79	59.079	ENSECAG00000011562	SMARCAD1	79	56.727	Equus_caballus
ENSELUG00000019154	smarcad1b	79	59.079	ENSFCAG00000003958	SMARCAD1	98	65.983	Felis_catus
ENSELUG00000019154	smarcad1b	82	57.598	ENSFALG00000006089	SMARCAD1	78	57.475	Ficedula_albicollis
ENSELUG00000019154	smarcad1b	79	59.335	ENSFDAG00000017027	SMARCAD1	76	58.682	Fukomys_damarensis
ENSELUG00000019154	smarcad1b	78	71.061	ENSFHEG00000012778	smarcad1a	73	67.185	Fundulus_heteroclitus
ENSELUG00000019154	smarcad1b	83	63.548	ENSGMOG00000018995	smarcad1a	93	63.139	Gadus_morhua
ENSELUG00000019154	smarcad1b	79	57.161	ENSGALG00000037339	SMARCAD1	92	57.161	Gallus_gallus
ENSELUG00000019154	smarcad1b	72	73.214	ENSGAFG00000013498	smarcad1a	67	73.214	Gambusia_affinis
ENSELUG00000019154	smarcad1b	83	63.758	ENSGACG00000007327	smarcad1a	91	63.394	Gasterosteus_aculeatus
ENSELUG00000019154	smarcad1b	93	51.182	ENSGAGG00000008582	SMARCAD1	79	56.182	Gopherus_agassizii
ENSELUG00000019154	smarcad1b	79	58.824	ENSGGOG00000023001	SMARCAD1	79	56.953	Gorilla_gorilla
ENSELUG00000019154	smarcad1b	78	70.088	ENSHBUG00000011042	smarcad1a	73	70.088	Haplochromis_burtoni
ENSELUG00000019154	smarcad1b	79	59.207	ENSHGLG00000005070	SMARCAD1	75	58.555	Heterocephalus_glaber_female
ENSELUG00000019154	smarcad1b	79	59.207	ENSHGLG00100006812	SMARCAD1	75	58.555	Heterocephalus_glaber_male
ENSELUG00000019154	smarcad1b	71	68.960	ENSHCOG00000007848	smarcad1a	72	63.329	Hippocampus_comes
ENSELUG00000019154	smarcad1b	93	64.194	ENSIPUG00000022817	smarcad1b	97	64.624	Ictalurus_punctatus
ENSELUG00000019154	smarcad1b	78	65.390	ENSIPUG00000000242	smarcad1a	86	57.683	Ictalurus_punctatus
ENSELUG00000019154	smarcad1b	79	57.854	ENSSTOG00000001227	SMARCAD1	79	56.039	Ictidomys_tridecemlineatus
ENSELUG00000019154	smarcad1b	79	59.207	ENSJJAG00000022342	Smarcad1	79	57.005	Jaculus_jaculus
ENSELUG00000019154	smarcad1b	86	71.299	ENSKMAG00000021351	smarcad1a	84	71.299	Kryptolebias_marmoratus
ENSELUG00000019154	smarcad1b	67	71.256	ENSLBEG00000008088	smarcad1a	63	71.256	Labrus_bergylta
ENSELUG00000019154	smarcad1b	80	62.359	ENSLOCG00000012909	smarcad1a	82	61.538	Lepisosteus_oculatus
ENSELUG00000019154	smarcad1b	79	57.417	ENSLAFG00000000040	SMARCAD1	75	56.654	Loxodonta_africana
ENSELUG00000019154	smarcad1b	79	58.951	ENSMFAG00000042606	SMARCAD1	91	57.074	Macaca_fascicularis
ENSELUG00000019154	smarcad1b	79	58.951	ENSMMUG00000022242	SMARCAD1	91	57.074	Macaca_mulatta
ENSELUG00000019154	smarcad1b	79	58.951	ENSMNEG00000038117	SMARCAD1	98	65.812	Macaca_nemestrina
ENSELUG00000019154	smarcad1b	79	58.824	ENSMLEG00000038333	SMARCAD1	98	65.812	Mandrillus_leucophaeus
ENSELUG00000019154	smarcad1b	82	67.500	ENSMAMG00000000933	smarcad1a	84	59.774	Mastacembelus_armatus
ENSELUG00000019154	smarcad1b	83	61.700	ENSMZEG00005005203	smarcad1a	84	61.700	Maylandia_zebra
ENSELUG00000019154	smarcad1b	83	52.899	ENSMGAG00000005577	SMARCAD1	84	52.771	Meleagris_gallopavo
ENSELUG00000019154	smarcad1b	79	58.559	ENSMAUG00000008417	Smarcad1	79	56.727	Mesocricetus_auratus
ENSELUG00000019154	smarcad1b	79	59.056	ENSMICG00000009746	SMARCAD1	79	56.590	Microcebus_murinus
ENSELUG00000019154	smarcad1b	81	57.038	ENSMOCG00000017142	Smarcad1	79	56.953	Microtus_ochrogaster
ENSELUG00000019154	smarcad1b	80	64.557	ENSMMOG00000000275	smarcad1a	89	73.113	Mola_mola
ENSELUG00000019154	smarcad1b	93	52.724	ENSMODG00000019268	SMARCAD1	79	57.831	Monodelphis_domestica
ENSELUG00000019154	smarcad1b	83	56.569	MGP_CAROLIEiJ_G0028458	-	64	56.569	Mus_caroli
ENSELUG00000019154	smarcad1b	83	56.485	ENSMUSG00000029920	Smarcad1	79	56.485	Mus_musculus
ENSELUG00000019154	smarcad1b	83	56.569	MGP_PahariEiJ_G0022198	Smarcad1	79	56.569	Mus_pahari
ENSELUG00000019154	smarcad1b	93	51.033	MGP_SPRETEiJ_G0029462	Smarcad1	79	56.569	Mus_spretus
ENSELUG00000019154	smarcad1b	79	59.207	ENSMPUG00000002111	SMARCAD1	79	56.727	Mustela_putorius_furo
ENSELUG00000019154	smarcad1b	79	59.056	ENSMLUG00000000425	SMARCAD1	77	56.815	Myotis_lucifugus
ENSELUG00000019154	smarcad1b	79	58.568	ENSNGAG00000000810	Smarcad1	79	57.021	Nannospalax_galili
ENSELUG00000019154	smarcad1b	68	70.579	ENSNBRG00000012749	smarcad1a	80	70.579	Neolamprologus_brichardi
ENSELUG00000019154	smarcad1b	79	58.824	ENSNLEG00000014225	SMARCAD1	98	65.812	Nomascus_leucogenys
ENSELUG00000019154	smarcad1b	79	58.824	ENSODEG00000004334	SMARCAD1	75	58.534	Octodon_degus
ENSELUG00000019154	smarcad1b	79	64.442	ENSONIG00000015059	smarcad1a	83	62.940	Oreochromis_niloticus
ENSELUG00000019154	smarcad1b	80	59.137	ENSOANG00000013764	SMARCAD1	98	57.399	Ornithorhynchus_anatinus
ENSELUG00000019154	smarcad1b	79	58.951	ENSOCUG00000017283	SMARCAD1	79	57.074	Oryctolagus_cuniculus
ENSELUG00000019154	smarcad1b	75	70.124	ENSORLG00000004869	smarcad1a	72	69.382	Oryzias_latipes
ENSELUG00000019154	smarcad1b	75	70.279	ENSORLG00020020569	smarcad1a	76	66.008	Oryzias_latipes_hni
ENSELUG00000019154	smarcad1b	75	70.279	ENSORLG00015009045	smarcad1a	71	69.848	Oryzias_latipes_hsok
ENSELUG00000019154	smarcad1b	76	70.266	ENSOMEG00000023032	smarcad1a	84	57.353	Oryzias_melastigma
ENSELUG00000019154	smarcad1b	79	58.801	ENSOGAG00000011444	SMARCAD1	76	58.512	Otolemur_garnettii
ENSELUG00000019154	smarcad1b	79	58.951	ENSOARG00000017851	SMARCAD1	79	56.606	Ovis_aries
ENSELUG00000019154	smarcad1b	79	58.824	ENSPPAG00000035715	SMARCAD1	79	56.953	Pan_paniscus
ENSELUG00000019154	smarcad1b	79	59.079	ENSPPRG00000024756	SMARCAD1	98	65.983	Panthera_pardus
ENSELUG00000019154	smarcad1b	79	58.929	ENSPTIG00000017868	SMARCAD1	79	56.469	Panthera_tigris_altaica
ENSELUG00000019154	smarcad1b	79	58.824	ENSPTRG00000023126	SMARCAD1	98	65.812	Pan_troglodytes
ENSELUG00000019154	smarcad1b	79	57.580	ENSPANG00000019757	SMARCAD1	79	55.901	Papio_anubis
ENSELUG00000019154	smarcad1b	79	58.131	ENSPSIG00000010255	SMARCAD1	75	58.184	Pelodiscus_sinensis
ENSELUG00000019154	smarcad1b	63	68.269	ENSPMGG00000010735	smarcad1a	95	64.845	Periophthalmus_magnuspinnatus
ENSELUG00000019154	smarcad1b	77	52.111	ENSPEMG00000001854	Smarcad1	80	49.757	Peromyscus_maniculatus_bairdii
ENSELUG00000019154	smarcad1b	86	48.059	ENSPMAG00000003516	smarcad1a	79	50.122	Petromyzon_marinus
ENSELUG00000019154	smarcad1b	83	57.333	ENSPCIG00000008137	SMARCAD1	98	60.298	Phascolarctos_cinereus
ENSELUG00000019154	smarcad1b	77	72.075	ENSPFOG00000019116	smarcad1a	72	67.278	Poecilia_formosa
ENSELUG00000019154	smarcad1b	77	71.919	ENSPLAG00000000108	smarcad1a	72	67.137	Poecilia_latipinna
ENSELUG00000019154	smarcad1b	77	72.075	ENSPMEG00000009155	smarcad1a	72	67.278	Poecilia_mexicana
ENSELUG00000019154	smarcad1b	81	69.152	ENSPREG00000018185	smarcad1a	80	67.660	Poecilia_reticulata
ENSELUG00000019154	smarcad1b	79	58.418	ENSPPYG00000014935	SMARCAD1	79	56.574	Pongo_abelii
ENSELUG00000019154	smarcad1b	63	57.416	ENSPCOG00000020478	SMARCAD1	69	59.628	Propithecus_coquereli
ENSELUG00000019154	smarcad1b	79	58.771	ENSPVAG00000001760	SMARCAD1	79	56.432	Pteropus_vampyrus
ENSELUG00000019154	smarcad1b	68	69.985	ENSPNYG00000010087	smarcad1a	81	69.985	Pundamilia_nyererei
ENSELUG00000019154	smarcad1b	81	61.077	ENSPNAG00000001663	smarcad1a	83	61.077	Pygocentrus_nattereri
ENSELUG00000019154	smarcad1b	93	64.051	ENSPNAG00000010099	smarcad1b	98	65.591	Pygocentrus_nattereri
ENSELUG00000019154	smarcad1b	81	57.160	ENSRNOG00000006391	Smarcad1	78	57.160	Rattus_norvegicus
ENSELUG00000019154	smarcad1b	79	58.824	ENSRBIG00000041989	SMARCAD1	79	56.953	Rhinopithecus_bieti
ENSELUG00000019154	smarcad1b	79	58.824	ENSRROG00000035309	SMARCAD1	79	56.953	Rhinopithecus_roxellana
ENSELUG00000019154	smarcad1b	79	58.440	ENSSBOG00000032114	SMARCAD1	98	65.812	Saimiri_boliviensis_boliviensis
ENSELUG00000019154	smarcad1b	93	52.735	ENSSHAG00000001279	SMARCAD1	79	57.952	Sarcophilus_harrisii
ENSELUG00000019154	smarcad1b	93	60.958	ENSSFOG00015016814	smarcad1b	95	60.958	Scleropages_formosus
ENSELUG00000019154	smarcad1b	77	63.411	ENSSFOG00015020909	smarcad1a	98	63.316	Scleropages_formosus
ENSELUG00000019154	smarcad1b	70	69.287	ENSSMAG00000001326	smarcad1a	63	69.287	Scophthalmus_maximus
ENSELUG00000019154	smarcad1b	70	69.635	ENSSDUG00000022338	smarcad1a	84	67.893	Seriola_dumerili
ENSELUG00000019154	smarcad1b	95	69.648	ENSSLDG00000024986	smarcad1a	78	69.648	Seriola_lalandi_dorsalis
ENSELUG00000019154	smarcad1b	59	66.610	ENSSPUG00000004633	SMARCAD1	98	66.610	Sphenodon_punctatus
ENSELUG00000019154	smarcad1b	79	71.704	ENSSPAG00000001970	smarcad1a	72	71.746	Stegastes_partitus
ENSELUG00000019154	smarcad1b	79	59.207	ENSSSCG00000009193	SMARCAD1	96	56.848	Sus_scrofa
ENSELUG00000019154	smarcad1b	79	58.524	ENSTGUG00000003127	SMARCAD1	98	58.726	Taeniopygia_guttata
ENSELUG00000019154	smarcad1b	80	63.934	ENSTNIG00000017585	smarcad1a	92	62.940	Tetraodon_nigroviridis
ENSELUG00000019154	smarcad1b	69	69.777	ENSTBEG00000002789	SMARCAD1	69	69.777	Tupaia_belangeri
ENSELUG00000019154	smarcad1b	79	58.876	ENSTTRG00000000226	SMARCAD1	81	56.538	Tursiops_truncatus
ENSELUG00000019154	smarcad1b	79	59.207	ENSUAMG00000022262	SMARCAD1	79	59.115	Ursus_americanus
ENSELUG00000019154	smarcad1b	79	59.207	ENSUMAG00000004549	SMARCAD1	79	56.727	Ursus_maritimus
ENSELUG00000019154	smarcad1b	79	59.207	ENSVVUG00000007271	SMARCAD1	97	57.423	Vulpes_vulpes
ENSELUG00000019154	smarcad1b	83	51.625	ENSXETG00000019214	smarcad1	94	51.745	Xenopus_tropicalis
ENSELUG00000019154	smarcad1b	82	62.733	ENSXCOG00000005232	smarcad1a	84	68.768	Xiphophorus_couchianus
ENSELUG00000019154	smarcad1b	80	69.675	ENSXMAG00000015350	smarcad1a	72	67.751	Xiphophorus_maculatus