EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000019240 (Gene tree)
Gene ID: 105026501
Gene Symbol: -
Alias: -
Full Name: ras-related protein Rab-11A
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 6989 bases
Position: chrLG02:31317364-31324352
Accession: 105026501
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000039179	MMR_HSR1	PF01926.23	3e-07	1	1
ENSELUP00000039172	MMR_HSR1	PF01926.23	3.5e-07	1	1
ENSELUP00000039168	MMR_HSR1	PF01926.23	5.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000030265	-	540	-	ENSELUP00000039179	179 (aa)	-	-
ENSELUT00000030394	-	729	XM_013137080	ENSELUP00000039172	195 (aa)	XP_012992534	UPI00066195FF
ENSELUT00000041245	-	822	-	ENSELUP00000039168	226 (aa)	-	-

Gene Model

Click here to download ENSELUG00000019240's gene model file

Pathways

Pathway ID	Pathway Name	Source
els04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000019240's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000019240	-	86	47.337	ENSELUG00000013957	-	79	47.337
ENSELUG00000019240	-	97	67.895	ENSELUG00000006604	rab25a	89	67.895
ENSELUG00000019240	-	87	52.941	ENSELUG00000015413	rab1ab	84	52.941
ENSELUG00000019240	-	76	36.000	ENSELUG00000004712	HRAS	85	37.037
ENSELUG00000019240	-	84	42.424	ENSELUG00000007123	rab12	69	42.424
ENSELUG00000019240	-	88	34.302	ENSELUG00000001257	rab6ba	83	34.302
ENSELUG00000019240	-	82	31.875	ENSELUG00000006480	rheb	86	31.875
ENSELUG00000019240	-	88	45.930	ENSELUG00000010439	-	78	45.930
ENSELUG00000019240	-	99	89.175	ENSELUG00000012035	rab11al	90	89.175
ENSELUG00000019240	-	86	30.178	ENSELUG00000008604	rras2	91	30.366
ENSELUG00000019240	-	87	45.614	ENSELUG00000016450	rab18b	83	45.614
ENSELUG00000019240	-	88	36.957	ENSELUG00000002575	rab33ba	75	37.500
ENSELUG00000019240	-	92	41.667	ENSELUG00000005989	RAB15	83	41.667
ENSELUG00000019240	-	65	41.880	ENSELUG00000005597	rab34b	50	39.231
ENSELUG00000019240	-	83	30.061	ENSELUG00000016028	rhebl1	88	30.061
ENSELUG00000019240	-	83	42.236	ENSELUG00000015343	rab22a	83	42.236
ENSELUG00000019240	-	87	52.941	ENSELUG00000012428	-	85	52.941
ENSELUG00000019240	-	99	90.722	ENSELUG00000000916	-	96	95.489
ENSELUG00000019240	-	78	39.873	ENSELUG00000018921	rab36	59	39.873
ENSELUG00000019240	-	84	46.626	ENSELUG00000006462	rab5aa	75	46.626
ENSELUG00000019240	-	89	52.874	ENSELUG00000013571	-	81	52.874
ENSELUG00000019240	-	84	47.853	ENSELUG00000018516	rab5c	75	47.853
ENSELUG00000019240	-	83	33.129	ENSELUG00000005090	si:ch73-116o1.2	71	34.857
ENSELUG00000019240	-	83	32.948	ENSELUG00000013206	rasl11a	73	32.941
ENSELUG00000019240	-	86	52.976	ENSELUG00000023815	-	84	52.976
ENSELUG00000019240	-	86	47.337	ENSELUG00000005304	rab39ba	79	47.337
ENSELUG00000019240	-	84	46.012	ENSELUG00000013436	rab5ab	75	46.012
ENSELUG00000019240	-	84	33.939	ENSELUG00000003058	KRAS	92	35.028
ENSELUG00000019240	-	89	46.243	ENSELUG00000012801	rab13	87	46.243
ENSELUG00000019240	-	90	32.222	ENSELUG00000013666	si:cabz01085950.1	88	32.222
ENSELUG00000019240	-	85	39.412	ENSELUG00000016622	rab9a	84	39.412
ENSELUG00000019240	-	89	44.134	ENSELUG00000020012	rab15	78	44.578
ENSELUG00000019240	-	89	53.448	ENSELUG00000009832	rab14	81	53.448
ENSELUG00000019240	-	99	97.423	ENSELUG00000002999	rab11a	93	99.259
ENSELUG00000019240	-	81	36.943	ENSELUG00000008876	rab6a	75	36.306
ENSELUG00000019240	-	87	35.294	ENSELUG00000020788	rab23	80	34.921
ENSELUG00000019240	-	83	45.062	ENSELUG00000003805	rab18a	79	45.062
ENSELUG00000019240	-	81	41.104	ENSELUG00000000175	zgc:100918	79	41.104
ENSELUG00000019240	-	81	36.943	ENSELUG00000022470	rab6bb	75	36.943
ENSELUG00000019240	-	81	41.104	ENSELUG00000006539	RAB7A	78	41.104
ENSELUG00000019240	-	81	41.104	ENSELUG00000016682	-	78	41.104
ENSELUG00000019240	-	99	90.722	ENSELUG00000020948	-	98	96.875
ENSELUG00000019240	-	84	32.121	ENSELUG00000017558	mras	82	33.898
ENSELUG00000019240	-	88	40.462	ENSELUG00000023120	-	82	42.073
ENSELUG00000019240	-	86	48.810	ENSELUG00000023972	rab35	95	45.550
ENSELUG00000019240	-	89	41.011	ENSELUG00000021199	RAB9A	80	41.011
ENSELUG00000019240	-	88	50.000	ENSELUG00000011680	zgc:171927	82	50.000
ENSELUG00000019240	-	74	41.772	ENSELUG00000011352	-	61	41.772
ENSELUG00000019240	-	93	44.199	ENSELUG00000023247	si:dkey-16l2.16	86	44.199
ENSELUG00000019240	-	94	37.056	ENSELUG00000013219	rab33a	82	37.056
ENSELUG00000019240	-	87	52.353	ENSELUG00000012166	RAB1A	80	52.353
ENSELUG00000019240	-	99	91.753	ENSELUG00000021148	rab11bb	89	91.753
ENSELUG00000019240	-	93	41.530	ENSELUG00000010345	rab42a	85	41.530
ENSELUG00000019240	-	87	44.970	ENSELUG00000022997	rab30	84	44.970
ENSELUG00000019240	-	83	42.515	ENSELUG00000004378	rab9b	82	42.515
ENSELUG00000019240	-	88	54.386	ENSELUG00000023964	rab2a	81	54.386
ENSELUG00000019240	-	81	55.696	ENSELUG00000014785	rab4a	74	55.696
ENSELUG00000019240	-	84	31.098	ENSELUG00000018367	rheb	89	31.098
ENSELUG00000019240	-	93	73.077	ENSELUG00000012060	rab25b	86	73.077

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000019240	-	99	92.784	ENSG00000185236	RAB11B	100	93.478	Homo_sapiens
ENSELUG00000019240	-	99	91.371	ENSAMEG00000004955	RAB11B	89	91.371	Ailuropoda_melanoleuca
ENSELUG00000019240	-	93	90.608	ENSACIG00000024374	rab11ba	74	90.608	Amphilophus_citrinellus
ENSELUG00000019240	-	99	92.784	ENSAOCG00000018050	rab11ba	89	92.784	Amphiprion_ocellaris
ENSELUG00000019240	-	99	92.268	ENSAPEG00000009177	rab11ba	89	92.268	Amphiprion_percula
ENSELUG00000019240	-	99	92.784	ENSATEG00000023730	rab11ba	89	92.784	Anabas_testudineus
ENSELUG00000019240	-	99	92.784	ENSANAG00000037616	RAB11B	95	96.471	Aotus_nancymaae
ENSELUG00000019240	-	99	84.021	ENSACLG00000018852	-	88	84.021	Astatotilapia_calliptera
ENSELUG00000019240	-	99	91.237	ENSACLG00000005420	rab11ba	89	91.237	Astatotilapia_calliptera
ENSELUG00000019240	-	95	88.172	WBGene00004274	rab-11.1	88	88.172	Caenorhabditis_elegans
ENSELUG00000019240	-	99	92.784	ENSCJAG00000010778	RAB11B	95	96.471	Callithrix_jacchus
ENSELUG00000019240	-	99	92.784	ENSCAFG00000032060	RAB11B	89	92.784	Canis_familiaris
ENSELUG00000019240	-	99	92.784	ENSCAFG00020022184	RAB11B	89	92.784	Canis_lupus_dingo
ENSELUG00000019240	-	99	92.784	ENSTSYG00000014758	RAB11B	89	92.784	Carlito_syrichta
ENSELUG00000019240	-	99	92.784	ENSCPOG00000030154	RAB11B	89	92.784	Cavia_porcellus
ENSELUG00000019240	-	99	92.784	ENSCCAG00000031042	RAB11B	94	96.471	Cebus_capucinus
ENSELUG00000019240	-	99	92.784	ENSCLAG00000003207	RAB11B	89	92.784	Chinchilla_lanigera
ENSELUG00000019240	-	99	92.784	ENSCSAG00000008024	RAB11B	89	92.784	Chlorocebus_sabaeus
ENSELUG00000019240	-	99	76.804	ENSCHOG00000013525	RAB11B	89	76.804	Choloepus_hoffmanni
ENSELUG00000019240	-	94	92.896	ENSCING00000009526	-	84	92.896	Ciona_intestinalis
ENSELUG00000019240	-	99	92.784	ENSCANG00000040517	RAB11B	89	92.784	Colobus_angolensis_palliatus
ENSELUG00000019240	-	99	92.784	ENSCGRG00001013827	Rab11b	89	92.784	Cricetulus_griseus_chok1gshd
ENSELUG00000019240	-	99	92.784	ENSCGRG00000010967	Rab11b	89	92.784	Cricetulus_griseus_crigri
ENSELUG00000019240	-	99	92.268	ENSCSEG00000007121	rab11ba	75	92.268	Cynoglossus_semilaevis
ENSELUG00000019240	-	99	92.784	ENSDARG00000041878	rab11ba	89	92.784	Danio_rerio
ENSELUG00000019240	-	99	90.722	ENSDNOG00000004134	-	89	90.722	Dasypus_novemcinctus
ENSELUG00000019240	-	99	92.784	ENSDNOG00000014618	RAB11B	86	92.784	Dasypus_novemcinctus
ENSELUG00000019240	-	99	92.784	ENSDORG00000006304	Rab11b	89	92.784	Dipodomys_ordii
ENSELUG00000019240	-	99	92.268	ENSEBUG00000011775	rab11ba	87	92.268	Eptatretus_burgeri
ENSELUG00000019240	-	98	84.293	ENSEBUG00000015447	-	88	84.293	Eptatretus_burgeri
ENSELUG00000019240	-	73	99.301	ENSEEUG00000009165	-	100	99.301	Erinaceus_europaeus
ENSELUG00000019240	-	99	92.784	ENSFCAG00000015216	RAB11B	89	92.784	Felis_catus
ENSELUG00000019240	-	99	92.784	ENSFDAG00000019872	RAB11B	89	92.784	Fukomys_damarensis
ENSELUG00000019240	-	99	91.753	ENSFHEG00000022642	rab11ba	89	91.753	Fundulus_heteroclitus
ENSELUG00000019240	-	99	90.722	ENSGMOG00000007390	rab11ba	89	90.722	Gadus_morhua
ENSELUG00000019240	-	99	91.753	ENSGAFG00000005679	rab11ba	89	91.753	Gambusia_affinis
ENSELUG00000019240	-	99	92.268	ENSGAGG00000012557	-	89	92.268	Gopherus_agassizii
ENSELUG00000019240	-	99	92.784	ENSHGLG00000014984	RAB11B	89	92.784	Heterocephalus_glaber_female
ENSELUG00000019240	-	99	92.784	ENSHGLG00100003638	RAB11B	89	92.784	Heterocephalus_glaber_male
ENSELUG00000019240	-	99	92.784	ENSSTOG00000031571	RAB11B	89	92.784	Ictidomys_tridecemlineatus
ENSELUG00000019240	-	99	92.784	ENSJJAG00000018891	Rab11b	89	92.784	Jaculus_jaculus
ENSELUG00000019240	-	99	92.268	ENSKMAG00000006082	-	89	92.268	Kryptolebias_marmoratus
ENSELUG00000019240	-	99	92.268	ENSLBEG00000006087	rab11ba	89	92.268	Labrus_bergylta
ENSELUG00000019240	-	87	95.882	ENSLACG00000016974	RAB11B	99	95.882	Latimeria_chalumnae
ENSELUG00000019240	-	99	92.784	ENSLAFG00000013598	RAB11B	89	92.784	Loxodonta_africana
ENSELUG00000019240	-	99	92.784	ENSMNEG00000039759	-	89	92.784	Macaca_nemestrina
ENSELUG00000019240	-	99	91.753	ENSMAMG00000018556	rab11ba	89	91.753	Mastacembelus_armatus
ENSELUG00000019240	-	99	91.237	ENSMZEG00005010947	rab11ba	89	91.237	Maylandia_zebra
ENSELUG00000019240	-	99	84.021	ENSMZEG00005019251	-	88	84.021	Maylandia_zebra
ENSELUG00000019240	-	99	92.784	ENSMAUG00000021579	Rab11b	89	92.784	Mesocricetus_auratus
ENSELUG00000019240	-	99	92.784	ENSMOCG00000012667	Rab11b	89	92.784	Microtus_ochrogaster
ENSELUG00000019240	-	99	90.206	ENSMALG00000021949	rab11ba	89	90.206	Monopterus_albus
ENSELUG00000019240	-	99	92.784	MGP_CAROLIEiJ_G0021415	Rab11b	99	97.279	Mus_caroli
ENSELUG00000019240	-	99	92.784	ENSMUSG00000077450	Rab11b	99	97.279	Mus_musculus
ENSELUG00000019240	-	99	92.784	MGP_PahariEiJ_G0020420	Rab11b	89	92.784	Mus_pahari
ENSELUG00000019240	-	99	92.784	MGP_SPRETEiJ_G0022327	Rab11b	99	97.279	Mus_spretus
ENSELUG00000019240	-	99	92.784	ENSMPUG00000007263	RAB11B	89	92.784	Mustela_putorius_furo
ENSELUG00000019240	-	99	87.817	ENSMLUG00000002308	-	89	87.817	Myotis_lucifugus
ENSELUG00000019240	-	99	92.784	ENSNGAG00000015757	Rab11b	89	92.784	Nannospalax_galili
ENSELUG00000019240	-	99	91.753	ENSNBRG00000023898	rab11ba	74	91.753	Neolamprologus_brichardi
ENSELUG00000019240	-	99	92.784	ENSNLEG00000001733	RAB11B	89	92.784	Nomascus_leucogenys
ENSELUG00000019240	-	99	92.784	ENSODEG00000011371	RAB11B	89	92.784	Octodon_degus
ENSELUG00000019240	-	99	92.268	ENSONIG00000002535	rab11ba	89	92.268	Oreochromis_niloticus
ENSELUG00000019240	-	81	96.178	ENSOCUG00000028208	RAB11B	64	94.410	Oryctolagus_cuniculus
ENSELUG00000019240	-	99	92.268	ENSORLG00000015307	rab11ba	89	92.268	Oryzias_latipes
ENSELUG00000019240	-	99	92.268	ENSORLG00020020816	rab11ba	89	92.268	Oryzias_latipes_hni
ENSELUG00000019240	-	99	92.268	ENSORLG00015016946	rab11ba	73	92.268	Oryzias_latipes_hsok
ENSELUG00000019240	-	99	92.268	ENSOMEG00000002581	rab11ba	89	92.268	Oryzias_melastigma
ENSELUG00000019240	-	99	92.784	ENSOGAG00000003227	RAB11B	88	92.784	Otolemur_garnettii
ENSELUG00000019240	-	99	92.784	ENSOARG00000003801	RAB11B	86	92.784	Ovis_aries
ENSELUG00000019240	-	92	92.222	ENSPPRG00000010160	RAB11B	88	92.222	Panthera_pardus
ENSELUG00000019240	-	99	92.784	ENSPEMG00000014536	Rab11b	89	92.784	Peromyscus_maniculatus_bairdii
ENSELUG00000019240	-	87	90.588	ENSPMAG00000009335	-	82	90.588	Petromyzon_marinus
ENSELUG00000019240	-	99	92.268	ENSPFOG00000006159	rab11ba	89	92.268	Poecilia_formosa
ENSELUG00000019240	-	99	92.268	ENSPLAG00000014243	rab11ba	89	92.268	Poecilia_latipinna
ENSELUG00000019240	-	99	92.268	ENSPMEG00000007917	rab11ba	67	92.268	Poecilia_mexicana
ENSELUG00000019240	-	99	92.268	ENSPREG00000006357	rab11ba	69	92.268	Poecilia_reticulata
ENSELUG00000019240	-	99	92.784	ENSPPYG00000009504	RAB11B	89	92.784	Pongo_abelii
ENSELUG00000019240	-	99	82.990	ENSPCAG00000016118	RAB11B	89	82.990	Procavia_capensis
ENSELUG00000019240	-	75	97.260	ENSPCOG00000008655	-	100	97.260	Propithecus_coquereli
ENSELUG00000019240	-	99	92.784	ENSPCOG00000028053	RAB11B	93	96.471	Propithecus_coquereli
ENSELUG00000019240	-	99	92.784	ENSPVAG00000009645	RAB11B	89	92.784	Pteropus_vampyrus
ENSELUG00000019240	-	99	91.237	ENSPNYG00000019644	rab11ba	89	91.237	Pundamilia_nyererei
ENSELUG00000019240	-	99	75.000	ENSPNYG00000023810	-	86	75.000	Pundamilia_nyererei
ENSELUG00000019240	-	99	92.268	ENSPNAG00000020475	rab11ba	89	92.268	Pygocentrus_nattereri
ENSELUG00000019240	-	99	91.237	ENSPNAG00000006431	-	89	91.237	Pygocentrus_nattereri
ENSELUG00000019240	-	99	92.784	ENSRNOG00000007648	Rab11b	89	92.784	Rattus_norvegicus
ENSELUG00000019240	-	99	92.784	ENSSBOG00000035094	RAB11B	95	96.471	Saimiri_boliviensis_boliviensis
ENSELUG00000019240	-	99	92.268	ENSSDUG00000002965	rab11ba	89	92.268	Seriola_dumerili
ENSELUG00000019240	-	99	92.268	ENSSLDG00000005221	rab11ba	89	92.268	Seriola_lalandi_dorsalis
ENSELUG00000019240	-	99	92.784	ENSSPAG00000017313	rab11ba	89	92.784	Stegastes_partitus
ENSELUG00000019240	-	99	92.784	ENSSSCG00000013600	RAB11B	89	92.784	Sus_scrofa
ENSELUG00000019240	-	66	99.225	ENSTBEG00000014750	-	100	99.225	Tupaia_belangeri
ENSELUG00000019240	-	99	92.784	ENSTTRG00000009758	RAB11B	89	92.784	Tursiops_truncatus
ENSELUG00000019240	-	93	81.768	ENSUMAG00000014594	RAB11B	85	81.768	Ursus_maritimus
ENSELUG00000019240	-	99	92.784	ENSVVUG00000025210	RAB11B	89	92.784	Vulpes_vulpes
ENSELUG00000019240	-	99	91.753	ENSXETG00000021890	rab11b.2	88	91.753	Xenopus_tropicalis
ENSELUG00000019240	-	72	97.656	ENSXCOG00000009194	-	98	96.992	Xiphophorus_couchianus
ENSELUG00000019240	-	99	91.753	ENSXMAG00000013416	rab11ba	89	91.753	Xiphophorus_maculatus