EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSELUG00000019328 (Gene tree)
Gene ID
-
Gene Symbol
RBMS1 (1 of many)
Alias
C2orf12|DKFZp564H0764|HCC-4|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1
Full Name
RNA-binding motif%2C single-stranded-interacting protein 1
Gene Type
protein_coding
Species
Esox_lucius
Status
putative
Strand
Plus strand
Length
19805 bases
Position
chrLG16:16420432-16440236
Accession
105022441
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSELUP00000039233RRM_1PF00076.223.7e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSELUT00000030346RBMS1 (1 of many)-2011119XM_013137949ENSELUP00000039233372 (aa)XP_012993403-
Gene Model
Click here to download ENSELUG00000019328's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000019328's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSELUG00000019328RBMS19364.789ENSELUG00000019834rbms2a8863.559
ENSELUG00000019328RBMS19260.160ENSELUG00000018923rbms1a9561.143
ENSELUG00000019328RBMS19160.714ENSELUG00000006905-9661.290
ENSELUG00000019328RBMS19258.824ENSELUG00000002862rbms39460.163
ENSELUG00000019328RBMS19657.692ENSELUG00000007892rbms2b9957.692
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSELUG00000019328RBMS19471.053ENSG00000153250RBMS19871.053Homo_sapiens
ENSELUG00000019328RBMS18557.849ENSAPOG00000013761rbms1a8957.849Acanthochromis_polyacanthus
ENSELUG00000019328RBMS19475.526ENSAPOG00000024437-9673.947Acanthochromis_polyacanthus
ENSELUG00000019328RBMS19469.251ENSAMEG00000012661RBMS19969.531Ailuropoda_melanoleuca
ENSELUG00000019328RBMS18551.895ENSACIG00000000113rbms1a8951.895Amphilophus_citrinellus
ENSELUG00000019328RBMS19773.454ENSACIG00000021498RBMS19873.454Amphilophus_citrinellus
ENSELUG00000019328RBMS18558.140ENSAOCG00000010066rbms1a8958.140Amphiprion_ocellaris
ENSELUG00000019328RBMS19475.726ENSAOCG00000014482-9675.726Amphiprion_ocellaris
ENSELUG00000019328RBMS19475.462ENSAPEG00000018371-9675.462Amphiprion_percula
ENSELUG00000019328RBMS18558.140ENSAPEG00000023563rbms1a8958.140Amphiprion_percula
ENSELUG00000019328RBMS18956.546ENSATEG00000015450rbms1a8956.851Anabas_testudineus
ENSELUG00000019328RBMS19471.504ENSATEG00000018573RBMS19671.240Anabas_testudineus
ENSELUG00000019328RBMS19472.105ENSAPLG00000007282RBMS19572.105Anas_platyrhynchos
ENSELUG00000019328RBMS19472.468ENSACAG00000011984RBMS17970.649Anolis_carolinensis
ENSELUG00000019328RBMS17573.667ENSANAG00000024424RBMS19373.667Aotus_nancymaae
ENSELUG00000019328RBMS18557.849ENSACLG00000021512rbms1a9057.849Astatotilapia_calliptera
ENSELUG00000019328RBMS19273.118ENSACLG00000013048RBMS19473.118Astatotilapia_calliptera
ENSELUG00000019328RBMS19466.053ENSAMXG00000002146rbms1a9962.626Astyanax_mexicanus
ENSELUG00000019328RBMS19474.474ENSAMXG00000009969RBMS19673.158Astyanax_mexicanus
ENSELUG00000019328RBMS19471.316ENSBTAG00000005180RBMS19770.153Bos_taurus
ENSELUG00000019328RBMS19164.770ENSCJAG00000022465-9964.508Callithrix_jacchus
ENSELUG00000019328RBMS19368.338ENSCJAG00000012871-9968.351Callithrix_jacchus
ENSELUG00000019328RBMS19471.053ENSCJAG00000014861-9769.870Callithrix_jacchus
ENSELUG00000019328RBMS19471.053ENSCAFG00000009922RBMS19769.898Canis_familiaris
ENSELUG00000019328RBMS19470.526ENSCAFG00020006120RBMS19766.667Canis_lupus_dingo
ENSELUG00000019328RBMS19470.789ENSCHIG00000023380RBMS19370.789Capra_hircus
ENSELUG00000019328RBMS19472.358ENSTSYG00000005584RBMS19972.358Carlito_syrichta
ENSELUG00000019328RBMS19470.789ENSCPOG00000012310RBMS19967.424Cavia_porcellus
ENSELUG00000019328RBMS19570.390ENSCCAG00000033841RBMS19970.390Cebus_capucinus
ENSELUG00000019328RBMS19570.390ENSCATG00000043032RBMS19971.053Cercocebus_atys
ENSELUG00000019328RBMS19471.053ENSCLAG00000003031RBMS19571.053Chinchilla_lanigera
ENSELUG00000019328RBMS19471.053ENSCSAG00000015687RBMS19371.053Chlorocebus_sabaeus
ENSELUG00000019328RBMS19473.107ENSCPBG00000026455RBMS19573.107Chrysemys_picta_bellii
ENSELUG00000019328RBMS19471.053ENSCANG00000042152RBMS19871.053Colobus_angolensis_palliatus
ENSELUG00000019328RBMS19470.789ENSCGRG00001022833Rbms19370.789Cricetulus_griseus_chok1gshd
ENSELUG00000019328RBMS19470.789ENSCGRG00000008824Rbms19967.929Cricetulus_griseus_crigri
ENSELUG00000019328RBMS19469.291ENSCSEG00000010652RBMS19667.717Cynoglossus_semilaevis
ENSELUG00000019328RBMS18955.989ENSCSEG00000000889rbms1a9056.268Cynoglossus_semilaevis
ENSELUG00000019328RBMS18556.395ENSCVAG00000014698rbms1a8956.395Cyprinodon_variegatus
ENSELUG00000019328RBMS19471.240ENSCVAG00000002027RBMS19672.206Cyprinodon_variegatus
ENSELUG00000019328RBMS19465.879ENSDARG00000074023rbms1a9564.304Danio_rerio
ENSELUG00000019328RBMS18667.391ENSDNOG00000040691RBMS19567.209Dasypus_novemcinctus
ENSELUG00000019328RBMS19570.649ENSDORG00000007103Rbms19670.649Dipodomys_ordii
ENSELUG00000019328RBMS19460.526ENSETEG00000012135RBMS19960.526Echinops_telfairi
ENSELUG00000019328RBMS19470.789ENSEASG00005023132RBMS19769.643Equus_asinus_asinus
ENSELUG00000019328RBMS19470.789ENSECAG00000019894RBMS19370.789Equus_caballus
ENSELUG00000019328RBMS17382.759ENSEEUG00000005628RBMS16882.759Erinaceus_europaeus
ENSELUG00000019328RBMS19470.789ENSFCAG00000012524RBMS19569.405Felis_catus
ENSELUG00000019328RBMS18671.591ENSFALG00000004440RBMS19571.388Ficedula_albicollis
ENSELUG00000019328RBMS19968.395ENSFDAG00000015692RBMS19968.395Fukomys_damarensis
ENSELUG00000019328RBMS18557.267ENSFHEG00000005662rbms1a8957.143Fundulus_heteroclitus
ENSELUG00000019328RBMS19468.602ENSFHEG00000000720RBMS19668.865Fundulus_heteroclitus
ENSELUG00000019328RBMS18255.942ENSGMOG00000000525rbms1a9955.775Gadus_morhua
ENSELUG00000019328RBMS19471.802ENSGALG00000011132RBMS19571.955Gallus_gallus
ENSELUG00000019328RBMS19469.129ENSGAFG00000007708RBMS19671.240Gambusia_affinis
ENSELUG00000019328RBMS18957.222ENSGAFG00000011633rbms1a9557.558Gambusia_affinis
ENSELUG00000019328RBMS19471.240ENSGACG00000005671RBMS19671.504Gasterosteus_aculeatus
ENSELUG00000019328RBMS18954.255ENSGACG00000015174rbms1a9158.462Gasterosteus_aculeatus
ENSELUG00000019328RBMS19473.107ENSGAGG00000007866RBMS19573.107Gopherus_agassizii
ENSELUG00000019328RBMS19469.452ENSGGOG00000043756-9768.622Gorilla_gorilla
ENSELUG00000019328RBMS19569.923ENSGGOG00000001264RBMS19969.923Gorilla_gorilla
ENSELUG00000019328RBMS18774.212ENSHBUG00000004516RBMS19274.212Haplochromis_burtoni
ENSELUG00000019328RBMS18557.849ENSHBUG00000004802rbms1a9057.849Haplochromis_burtoni
ENSELUG00000019328RBMS19768.702ENSHGLG00000010387RBMS19867.519Heterocephalus_glaber_female
ENSELUG00000019328RBMS19470.526ENSHGLG00100014105RBMS19867.519Heterocephalus_glaber_male
ENSELUG00000019328RBMS18954.039ENSHCOG00000020097rbms1a8957.434Hippocampus_comes
ENSELUG00000019328RBMS19470.185ENSHCOG00000016668RBMS19670.185Hippocampus_comes
ENSELUG00000019328RBMS19466.579ENSIPUG00000010131RBMS19665.000Ictalurus_punctatus
ENSELUG00000019328RBMS19476.253ENSIPUG00000014677RBMS19676.253Ictalurus_punctatus
ENSELUG00000019328RBMS19868.514ENSSTOG00000012501RBMS19967.677Ictidomys_tridecemlineatus
ENSELUG00000019328RBMS19470.000ENSJJAG00000016543Rbms19370.000Jaculus_jaculus
ENSELUG00000019328RBMS19474.142ENSKMAG00000013911RBMS19674.142Kryptolebias_marmoratus
ENSELUG00000019328RBMS18556.686ENSKMAG00000011839-8956.686Kryptolebias_marmoratus
ENSELUG00000019328RBMS18557.267ENSLBEG00000025962rbms1a8957.267Labrus_bergylta
ENSELUG00000019328RBMS19472.751ENSLBEG00000005787RBMS19672.751Labrus_bergylta
ENSELUG00000019328RBMS19371.466ENSLACG00000004324RBMS19974.828Latimeria_chalumnae
ENSELUG00000019328RBMS19476.253ENSLOCG00000008622rbms1a9676.253Lepisosteus_oculatus
ENSELUG00000019328RBMS19469.737ENSLAFG00000017217RBMS19969.737Loxodonta_africana
ENSELUG00000019328RBMS19570.390ENSMFAG00000000274RBMS19971.053Macaca_fascicularis
ENSELUG00000019328RBMS19471.053ENSMMUG00000016825RBMS19971.053Macaca_mulatta
ENSELUG00000019328RBMS19471.053ENSMNEG00000039425RBMS19971.053Macaca_nemestrina
ENSELUG00000019328RBMS19570.130ENSMLEG00000031517RBMS19970.789Mandrillus_leucophaeus
ENSELUG00000019328RBMS19870.408ENSMAMG00000003159-9972.340Mastacembelus_armatus
ENSELUG00000019328RBMS18954.875ENSMAMG00000005018rbms1a8955.102Mastacembelus_armatus
ENSELUG00000019328RBMS18557.849ENSMZEG00005005661rbms1a9057.849Maylandia_zebra
ENSELUG00000019328RBMS18072.086ENSMZEG00005007313RBMS19172.086Maylandia_zebra
ENSELUG00000019328RBMS18672.159ENSMGAG00000011054RBMS19176.000Meleagris_gallopavo
ENSELUG00000019328RBMS19470.526ENSMAUG00000008550Rbms19370.526Mesocricetus_auratus
ENSELUG00000019328RBMS19471.316ENSMICG00000008325RBMS19971.316Microcebus_murinus
ENSELUG00000019328RBMS19470.526ENSMOCG00000022617Rbms19370.526Microtus_ochrogaster
ENSELUG00000019328RBMS18553.216ENSMMOG00000018249rbms1a8953.216Mola_mola
ENSELUG00000019328RBMS19473.351ENSMMOG00000003707RBMS19673.351Mola_mola
ENSELUG00000019328RBMS19472.105ENSMODG00000005250RBMS19372.105Monodelphis_domestica
ENSELUG00000019328RBMS18556.851ENSMALG00000014235rbms1a8956.851Monopterus_albus
ENSELUG00000019328RBMS19069.697ENSMALG00000015715-9670.449Monopterus_albus
ENSELUG00000019328RBMS19271.011MGP_CAROLIEiJ_G0023586Rbms19271.011Mus_caroli
ENSELUG00000019328RBMS19271.277ENSMUSG00000026970Rbms19271.277Mus_musculus
ENSELUG00000019328RBMS19271.277MGP_PahariEiJ_G0025037Rbms19470.789Mus_pahari
ENSELUG00000019328RBMS19271.277MGP_SPRETEiJ_G0024508Rbms19271.277Mus_spretus
ENSELUG00000019328RBMS19467.424ENSMPUG00000000539RBMS19467.424Mustela_putorius_furo
ENSELUG00000019328RBMS19665.610ENSMLUG00000008762RBMS19765.610Myotis_lucifugus
ENSELUG00000019328RBMS19470.263ENSNGAG00000013636Rbms19370.263Nannospalax_galili
ENSELUG00000019328RBMS17458.472ENSNBRG00000020217rbms1a8558.472Neolamprologus_brichardi
ENSELUG00000019328RBMS18668.768ENSNBRG00000015151RBMS19468.768Neolamprologus_brichardi
ENSELUG00000019328RBMS19471.053ENSNLEG00000001667RBMS19671.053Nomascus_leucogenys
ENSELUG00000019328RBMS17562.667ENSMEUG00000000746RBMS19362.667Notamacropus_eugenii
ENSELUG00000019328RBMS19464.474ENSOPRG00000012431RBMS19364.474Ochotona_princeps
ENSELUG00000019328RBMS19470.526ENSODEG00000013934RBMS19370.526Octodon_degus
ENSELUG00000019328RBMS18558.140ENSONIG00000003329rbms1a8858.140Oreochromis_niloticus
ENSELUG00000019328RBMS19273.925ENSONIG00000008934RBMS19473.925Oreochromis_niloticus
ENSELUG00000019328RBMS19473.158ENSOANG00000006166RBMS19573.158Ornithorhynchus_anatinus
ENSELUG00000019328RBMS19966.110ENSOCUG00000017365RBMS19866.110Oryctolagus_cuniculus
ENSELUG00000019328RBMS18554.942ENSORLG00000003917rbms1a9054.942Oryzias_latipes
ENSELUG00000019328RBMS18865.546ENSORLG00000016818RBMS18967.714Oryzias_latipes
ENSELUG00000019328RBMS18865.266ENSORLG00020022335RBMS18967.429Oryzias_latipes_hni
ENSELUG00000019328RBMS18955.000ENSORLG00020018663rbms1a9055.233Oryzias_latipes_hni
ENSELUG00000019328RBMS18865.826ENSORLG00015018208RBMS18968.000Oryzias_latipes_hsok
ENSELUG00000019328RBMS18554.942ENSORLG00015016556rbms1a9054.942Oryzias_latipes_hsok
ENSELUG00000019328RBMS19166.301ENSOMEG00000002394RBMS19568.865Oryzias_melastigma
ENSELUG00000019328RBMS18669.774ENSOGAG00000002900RBMS19569.577Otolemur_garnettii
ENSELUG00000019328RBMS19470.789ENSOARG00000006870RBMS19370.789Ovis_aries
ENSELUG00000019328RBMS19471.053ENSPPAG00000040083RBMS19971.053Pan_paniscus
ENSELUG00000019328RBMS19368.435ENSPPAG00000036520-9968.617Pan_paniscus
ENSELUG00000019328RBMS19470.789ENSPPRG00000005040RBMS19569.405Panthera_pardus
ENSELUG00000019328RBMS19470.789ENSPTIG00000021240RBMS19569.405Panthera_tigris_altaica
ENSELUG00000019328RBMS19767.766ENSPTRG00000039358-9869.211Pan_troglodytes
ENSELUG00000019328RBMS19471.053ENSPTRG00000052304RBMS19971.053Pan_troglodytes
ENSELUG00000019328RBMS19570.390ENSPANG00000001383RBMS19971.053Papio_anubis
ENSELUG00000019328RBMS18771.429ENSPKIG00000012818rbms1a9867.929Paramormyrops_kingsleyae
ENSELUG00000019328RBMS19472.149ENSPKIG00000001498rbms1a9571.088Paramormyrops_kingsleyae
ENSELUG00000019328RBMS19472.063ENSPSIG00000010240RBMS19472.063Pelodiscus_sinensis
ENSELUG00000019328RBMS18369.048ENSPMGG00000006310RBMS19570.040Periophthalmus_magnuspinnatus
ENSELUG00000019328RBMS18553.644ENSPMGG00000004341rbms1a9053.644Periophthalmus_magnuspinnatus
ENSELUG00000019328RBMS19471.053ENSPEMG00000009449Rbms19671.053Peromyscus_maniculatus_bairdii
ENSELUG00000019328RBMS19472.105ENSPCIG00000018405RBMS19571.802Phascolarctos_cinereus
ENSELUG00000019328RBMS19570.496ENSPFOG00000017483RBMS19671.240Poecilia_formosa
ENSELUG00000019328RBMS18557.558ENSPFOG00000016116rbms1a8957.558Poecilia_formosa
ENSELUG00000019328RBMS19469.393ENSPLAG00000000920RBMS19671.504Poecilia_latipinna
ENSELUG00000019328RBMS18557.558ENSPLAG00000013864rbms1a8957.558Poecilia_latipinna
ENSELUG00000019328RBMS18557.558ENSPMEG00000016185rbms1a8957.558Poecilia_mexicana
ENSELUG00000019328RBMS19471.240ENSPMEG00000015838RBMS19671.240Poecilia_mexicana
ENSELUG00000019328RBMS19471.504ENSPREG00000008146RBMS19671.504Poecilia_reticulata
ENSELUG00000019328RBMS18557.558ENSPREG00000020161rbms1a8957.558Poecilia_reticulata
ENSELUG00000019328RBMS19468.182ENSPPYG00000012879-9468.182Pongo_abelii
ENSELUG00000019328RBMS19465.526ENSPCAG00000009673RBMS19365.526Procavia_capensis
ENSELUG00000019328RBMS19471.316ENSPCOG00000027294RBMS19569.972Propithecus_coquereli
ENSELUG00000019328RBMS19460.000ENSPVAG00000010429RBMS19360.000Pteropus_vampyrus
ENSELUG00000019328RBMS19273.656ENSPNYG00000002643RBMS19473.656Pundamilia_nyererei
ENSELUG00000019328RBMS19476.579ENSPNAG00000023479RBMS19675.263Pygocentrus_nattereri
ENSELUG00000019328RBMS19865.736ENSPNAG00000010225rbms1a9962.850Pygocentrus_nattereri
ENSELUG00000019328RBMS19270.745ENSRNOG00000008482Rbms19667.857Rattus_norvegicus
ENSELUG00000019328RBMS19470.789ENSRBIG00000044262RBMS19970.604Rhinopithecus_bieti
ENSELUG00000019328RBMS19570.390ENSRROG00000043108RBMS19971.053Rhinopithecus_roxellana
ENSELUG00000019328RBMS19469.430ENSSBOG00000034705RBMS19969.430Saimiri_boliviensis_boliviensis
ENSELUG00000019328RBMS19471.842ENSSHAG00000012271RBMS19371.842Sarcophilus_harrisii
ENSELUG00000019328RBMS19773.913ENSSFOG00015022929rbms19873.913Scleropages_formosus
ENSELUG00000019328RBMS18670.115ENSSFOG00015014493rbms1a9570.201Scleropages_formosus
ENSELUG00000019328RBMS18557.434ENSSMAG00000012722rbms1a9557.434Scophthalmus_maximus
ENSELUG00000019328RBMS19472.559ENSSMAG00000012152RBMS19771.311Scophthalmus_maximus
ENSELUG00000019328RBMS19574.474ENSSDUG00000018803RBMS19674.934Seriola_dumerili
ENSELUG00000019328RBMS18957.660ENSSDUG00000020602rbms1a9558.017Seriola_dumerili
ENSELUG00000019328RBMS18957.660ENSSLDG00000009495rbms1a8958.017Seriola_lalandi_dorsalis
ENSELUG00000019328RBMS19475.198ENSSLDG00000016556RBMS19675.198Seriola_lalandi_dorsalis
ENSELUG00000019328RBMS19446.966ENSSARG00000011085RBMS19346.966Sorex_araneus
ENSELUG00000019328RBMS18672.727ENSSPUG00000017163RBMS19472.521Sphenodon_punctatus
ENSELUG00000019328RBMS18557.558ENSSPAG00000005371rbms1a8957.558Stegastes_partitus
ENSELUG00000019328RBMS19476.253ENSSPAG00000000059RBMS19676.253Stegastes_partitus
ENSELUG00000019328RBMS18670.170ENSSSCG00000015888RBMS19769.388Sus_scrofa
ENSELUG00000019328RBMS19472.105ENSTGUG00000006606RBMS19372.105Taeniopygia_guttata
ENSELUG00000019328RBMS18771.714ENSTRUG00000005466-9669.554Takifugu_rubripes
ENSELUG00000019328RBMS18456.140ENSTRUG00000017155rbms1a8956.105Takifugu_rubripes
ENSELUG00000019328RBMS19270.430ENSTNIG00000016496RBMS19772.126Tetraodon_nigroviridis
ENSELUG00000019328RBMS18754.674ENSTNIG00000009477rbms1a10053.231Tetraodon_nigroviridis
ENSELUG00000019328RBMS19263.032ENSTBEG00000016156RBMS19963.032Tupaia_belangeri
ENSELUG00000019328RBMS19470.789ENSTTRG00000011058RBMS19970.789Tursiops_truncatus
ENSELUG00000019328RBMS19470.263ENSUAMG00000022331RBMS19470.263Ursus_americanus
ENSELUG00000019328RBMS19470.263ENSUMAG00000008605RBMS19770.263Ursus_maritimus
ENSELUG00000019328RBMS18872.394ENSVPAG00000002716RBMS19372.394Vicugna_pacos
ENSELUG00000019328RBMS19467.677ENSVVUG00000018682RBMS19569.688Vulpes_vulpes
ENSELUG00000019328RBMS19470.312ENSXETG00000016204rbms110069.792Xenopus_tropicalis
ENSELUG00000019328RBMS18554.519ENSXCOG00000001659rbms1a8954.519Xiphophorus_couchianus
ENSELUG00000019328RBMS18669.914ENSXCOG00000000211RBMS19569.914Xiphophorus_couchianus
ENSELUG00000019328RBMS19470.712ENSXMAG00000011405RBMS19670.712Xiphophorus_maculatus
ENSELUG00000019328RBMS18557.558ENSXMAG00000001802rbms1a8957.558Xiphophorus_maculatus

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