EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000019403 (Gene tree)
Gene ID: 105011192
Gene Symbol: larp1
Alias: wu:fb92d03|wu:fd15e07
Full Name: La ribonucleoprotein domain family member 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 34992 bases
Position: chrLG07:44853729-44888720
Accession: 105011192
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000020127	La	PF05383.17	1.1e-19	1	1
ENSELUP00000020147	La	PF05383.17	1.1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000030468	-	3553	XM_013134763	ENSELUP00000020127	1074 (aa)	XP_012990217	UPI000661E8E5
ENSELUT00000030486	-	3634	XM_013134760	ENSELUP00000020147	1101 (aa)	XP_012990214	UPI0006619C5C

Gene Model

Click here to download ENSELUG00000019403's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000019403's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000019403	larp1	60	51.437	ENSELUG00000023774	larp1b	84	49.714

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000019403	larp1	87	68.079	ENSG00000155506	LARP1	90	79.268	Homo_sapiens
ENSELUG00000019403	larp1	88	95.392	ENSAPOG00000020685	larp1	99	95.392	Acanthochromis_polyacanthus
ENSELUG00000019403	larp1	87	67.868	ENSAMEG00000016673	LARP1	99	67.528	Ailuropoda_melanoleuca
ENSELUG00000019403	larp1	99	70.783	ENSACIG00000012994	larp1	99	70.691	Amphilophus_citrinellus
ENSELUG00000019403	larp1	78	84.906	ENSAOCG00000007792	larp1	98	82.394	Amphiprion_ocellaris
ENSELUG00000019403	larp1	99	80.019	ENSAPEG00000022246	larp1	99	78.802	Amphiprion_percula
ENSELUG00000019403	larp1	98	77.656	ENSATEG00000013523	larp1	99	77.936	Anabas_testudineus
ENSELUG00000019403	larp1	82	71.868	ENSAPLG00000007559	LARP1	99	71.758	Anas_platyrhynchos
ENSELUG00000019403	larp1	87	69.223	ENSACAG00000004071	LARP1	97	70.667	Anolis_carolinensis
ENSELUG00000019403	larp1	87	68.079	ENSANAG00000029949	LARP1	99	64.706	Aotus_nancymaae
ENSELUG00000019403	larp1	99	78.336	ENSACLG00000015256	larp1	98	81.161	Astatotilapia_calliptera
ENSELUG00000019403	larp1	100	76.040	ENSAMXG00000000859	larp1	100	76.385	Astyanax_mexicanus
ENSELUG00000019403	larp1	97	63.570	ENSBTAG00000008443	LARP1	99	62.400	Bos_taurus
ENSELUG00000019403	larp1	99	63.191	ENSCJAG00000004454	LARP1	99	62.745	Callithrix_jacchus
ENSELUG00000019403	larp1	87	68.356	ENSCAFG00000017639	LARP1	99	66.701	Canis_familiaris
ENSELUG00000019403	larp1	81	69.855	ENSCAFG00020023860	LARP1	98	67.181	Canis_lupus_dingo
ENSELUG00000019403	larp1	97	62.778	ENSCHIG00000014414	LARP1	99	61.698	Capra_hircus
ENSELUG00000019403	larp1	87	68.672	ENSTSYG00000013732	LARP1	98	65.317	Carlito_syrichta
ENSELUG00000019403	larp1	77	68.192	ENSCAPG00000013865	LARP1	86	66.859	Cavia_aperea
ENSELUG00000019403	larp1	87	68.459	ENSCPOG00000003377	LARP1	99	67.699	Cavia_porcellus
ENSELUG00000019403	larp1	99	62.745	ENSCCAG00000025201	LARP1	99	62.210	Cebus_capucinus
ENSELUG00000019403	larp1	99	60.571	ENSCATG00000030675	LARP1	94	66.803	Cercocebus_atys
ENSELUG00000019403	larp1	90	67.100	ENSCLAG00000012755	LARP1	99	66.401	Chinchilla_lanigera
ENSELUG00000019403	larp1	81	67.076	ENSCSAG00000010800	LARP1	98	66.406	Chlorocebus_sabaeus
ENSELUG00000019403	larp1	83	63.897	ENSCHOG00000012716	LARP1	91	62.751	Choloepus_hoffmanni
ENSELUG00000019403	larp1	94	69.981	ENSCPBG00000002173	LARP1	98	68.662	Chrysemys_picta_bellii
ENSELUG00000019403	larp1	87	68.595	ENSCANG00000037418	LARP1	93	68.182	Colobus_angolensis_palliatus
ENSELUG00000019403	larp1	99	64.072	ENSCGRG00001016913	Larp1	99	63.167	Cricetulus_griseus_chok1gshd
ENSELUG00000019403	larp1	84	66.094	ENSCGRG00000009916	Larp1	99	65.129	Cricetulus_griseus_crigri
ENSELUG00000019403	larp1	99	79.833	ENSCSEG00000016431	larp1	99	79.025	Cynoglossus_semilaevis
ENSELUG00000019403	larp1	99	76.525	ENSCVAG00000022687	larp1	99	77.778	Cyprinodon_variegatus
ENSELUG00000019403	larp1	91	74.335	ENSDARG00000101722	larp1	96	73.824	Danio_rerio
ENSELUG00000019403	larp1	99	62.244	ENSDNOG00000012073	LARP1	99	61.799	Dasypus_novemcinctus
ENSELUG00000019403	larp1	87	66.034	ENSDORG00000002897	Larp1	97	64.907	Dipodomys_ordii
ENSELUG00000019403	larp1	81	69.214	ENSETEG00000020251	LARP1	100	68.660	Echinops_telfairi
ENSELUG00000019403	larp1	99	62.533	ENSEASG00005001070	LARP1	99	61.998	Equus_asinus_asinus
ENSELUG00000019403	larp1	99	62.533	ENSECAG00000017002	LARP1	79	61.998	Equus_caballus
ENSELUG00000019403	larp1	85	64.836	ENSEEUG00000001065	LARP1	99	63.180	Erinaceus_europaeus
ENSELUG00000019403	larp1	99	62.378	ENSFCAG00000000592	LARP1	99	62.145	Felis_catus
ENSELUG00000019403	larp1	78	73.063	ENSFALG00000008335	LARP1	99	71.156	Ficedula_albicollis
ENSELUG00000019403	larp1	87	68.356	ENSFDAG00000021125	LARP1	99	67.942	Fukomys_damarensis
ENSELUG00000019403	larp1	64	68.085	ENSFHEG00000020307	larp1	97	66.525	Fundulus_heteroclitus
ENSELUG00000019403	larp1	99	68.199	ENSGALG00000040109	LARP1	99	68.169	Gallus_gallus
ENSELUG00000019403	larp1	99	67.062	ENSGAGG00000025113	LARP1	98	72.216	Gopherus_agassizii
ENSELUG00000019403	larp1	87	67.975	ENSGGOG00000006048	LARP1	94	66.768	Gorilla_gorilla
ENSELUG00000019403	larp1	99	78.788	ENSHBUG00000020762	larp1	98	82.088	Haplochromis_burtoni
ENSELUG00000019403	larp1	99	62.612	ENSHGLG00000006267	LARP1	99	62.399	Heterocephalus_glaber_female
ENSELUG00000019403	larp1	88	58.195	ENSHGLG00100003395	-	90	57.317	Heterocephalus_glaber_male
ENSELUG00000019403	larp1	87	68.111	ENSHGLG00100014230	-	99	67.456	Heterocephalus_glaber_male
ENSELUG00000019403	larp1	90	90.291	ENSHCOG00000010786	larp1	97	90.291	Hippocampus_comes
ENSELUG00000019403	larp1	99	69.991	ENSIPUG00000019105	Larp1	99	71.214	Ictalurus_punctatus
ENSELUG00000019403	larp1	87	65.942	ENSSTOG00000005678	LARP1	98	65.114	Ictidomys_tridecemlineatus
ENSELUG00000019403	larp1	99	78.413	ENSKMAG00000018468	larp1	98	81.250	Kryptolebias_marmoratus
ENSELUG00000019403	larp1	99	76.902	ENSLBEG00000027172	larp1	99	76.165	Labrus_bergylta
ENSELUG00000019403	larp1	95	75.953	ENSLOCG00000012457	larp1	99	75.953	Lepisosteus_oculatus
ENSELUG00000019403	larp1	99	62.262	ENSLAFG00000008991	LARP1	99	62.218	Loxodonta_africana
ENSELUG00000019403	larp1	88	67.897	ENSMFAG00000031651	LARP1	94	66.905	Macaca_fascicularis
ENSELUG00000019403	larp1	87	65.564	ENSMMUG00000009411	LARP1	99	64.943	Macaca_mulatta
ENSELUG00000019403	larp1	82	69.011	ENSMNEG00000039294	LARP1	98	68.896	Macaca_nemestrina
ENSELUG00000019403	larp1	88	67.897	ENSMLEG00000035142	LARP1	94	66.905	Mandrillus_leucophaeus
ENSELUG00000019403	larp1	99	78.559	ENSMAMG00000021788	larp1	99	78.488	Mastacembelus_armatus
ENSELUG00000019403	larp1	99	78.336	ENSMZEG00005009345	larp1	98	81.161	Maylandia_zebra
ENSELUG00000019403	larp1	87	70.951	ENSMGAG00000005696	LARP1	99	70.951	Meleagris_gallopavo
ENSELUG00000019403	larp1	99	64.344	ENSMAUG00000001385	Larp1	99	63.538	Mesocricetus_auratus
ENSELUG00000019403	larp1	91	64.956	ENSMICG00000000837	LARP1	98	69.154	Microcebus_murinus
ENSELUG00000019403	larp1	99	63.891	ENSMOCG00000008920	Larp1	99	63.201	Microtus_ochrogaster
ENSELUG00000019403	larp1	96	59.325	ENSMMOG00000013364	larp1	99	60.485	Mola_mola
ENSELUG00000019403	larp1	88	68.557	ENSMODG00000008663	LARP1	99	67.732	Monodelphis_domestica
ENSELUG00000019403	larp1	99	79.152	ENSMALG00000017180	larp1	99	79.152	Monopterus_albus
ENSELUG00000019403	larp1	99	63.891	MGP_CAROLIEiJ_G0016383	Larp1	99	63.167	Mus_caroli
ENSELUG00000019403	larp1	99	64.072	ENSMUSG00000037331	Larp1	99	63.258	Mus_musculus
ENSELUG00000019403	larp1	99	63.571	MGP_PahariEiJ_G0017518	Larp1	99	62.873	Mus_pahari
ENSELUG00000019403	larp1	99	64.163	MGP_SPRETEiJ_G0017225	Larp1	99	63.348	Mus_spretus
ENSELUG00000019403	larp1	83	60.171	ENSMPUG00000013564	LARP1	99	59.743	Mustela_putorius_furo
ENSELUG00000019403	larp1	87	64.573	ENSMLUG00000002608	LARP1	99	64.264	Myotis_lucifugus
ENSELUG00000019403	larp1	87	66.737	ENSNGAG00000001098	Larp1	98	64.979	Nannospalax_galili
ENSELUG00000019403	larp1	92	80.384	ENSNBRG00000008963	larp1	98	79.960	Neolamprologus_brichardi
ENSELUG00000019403	larp1	87	67.119	ENSNLEG00000016588	LARP1	98	65.231	Nomascus_leucogenys
ENSELUG00000019403	larp1	87	64.113	ENSMEUG00000002957	LARP1	99	64.008	Notamacropus_eugenii
ENSELUG00000019403	larp1	87	68.841	ENSOPRG00000013014	LARP1	99	68.427	Ochotona_princeps
ENSELUG00000019403	larp1	88	67.788	ENSODEG00000010824	LARP1	99	67.528	Octodon_degus
ENSELUG00000019403	larp1	99	76.923	ENSONIG00000017308	larp1	99	77.347	Oreochromis_niloticus
ENSELUG00000019403	larp1	87	70.270	ENSOANG00000005096	LARP1	96	70.686	Ornithorhynchus_anatinus
ENSELUG00000019403	larp1	99	63.891	ENSOCUG00000013066	LARP1	99	63.234	Oryctolagus_cuniculus
ENSELUG00000019403	larp1	99	75.623	ENSORLG00000000824	larp1	99	78.092	Oryzias_latipes
ENSELUG00000019403	larp1	99	75.185	ENSORLG00020022241	larp1	99	74.472	Oryzias_latipes_hni
ENSELUG00000019403	larp1	99	73.684	ENSORLG00015007538	larp1	99	74.404	Oryzias_latipes_hsok
ENSELUG00000019403	larp1	99	74.235	ENSOMEG00000003134	larp1	99	75.856	Oryzias_melastigma
ENSELUG00000019403	larp1	87	68.252	ENSOGAG00000016750	LARP1	99	67.322	Otolemur_garnettii
ENSELUG00000019403	larp1	84	67.196	ENSOARG00000009893	LARP1	99	65.975	Ovis_aries
ENSELUG00000019403	larp1	87	67.975	ENSPPAG00000042993	LARP1	93	67.769	Pan_paniscus
ENSELUG00000019403	larp1	87	66.770	ENSPPRG00000009780	LARP1	93	65.528	Panthera_pardus
ENSELUG00000019403	larp1	87	66.838	ENSPTIG00000007013	LARP1	93	65.839	Panthera_tigris_altaica
ENSELUG00000019403	larp1	99	60.606	ENSPTRG00000017447	LARP1	93	67.872	Pan_troglodytes
ENSELUG00000019403	larp1	99	60.482	ENSPANG00000008080	LARP1	94	66.803	Papio_anubis
ENSELUG00000019403	larp1	99	69.123	ENSPKIG00000017153	-	99	70.352	Paramormyrops_kingsleyae
ENSELUG00000019403	larp1	99	79.275	ENSPKIG00000010096	larp1	99	79.182	Paramormyrops_kingsleyae
ENSELUG00000019403	larp1	96	73.501	ENSPMGG00000011599	larp1	98	73.888	Periophthalmus_magnuspinnatus
ENSELUG00000019403	larp1	88	66.215	ENSPEMG00000022523	Larp1	99	64.585	Peromyscus_maniculatus_bairdii
ENSELUG00000019403	larp1	97	65.238	ENSPCIG00000019242	LARP1	89	64.585	Phascolarctos_cinereus
ENSELUG00000019403	larp1	98	75.945	ENSPFOG00000005836	larp1	99	74.127	Poecilia_formosa
ENSELUG00000019403	larp1	98	76.560	ENSPLAG00000008936	larp1	99	74.771	Poecilia_latipinna
ENSELUG00000019403	larp1	98	76.357	ENSPMEG00000013656	larp1	99	74.865	Poecilia_mexicana
ENSELUG00000019403	larp1	86	80.655	ENSPREG00000005726	larp1	98	78.221	Poecilia_reticulata
ENSELUG00000019403	larp1	87	65.275	ENSPCAG00000006407	LARP1	93	79.237	Procavia_capensis
ENSELUG00000019403	larp1	87	61.427	ENSPCOG00000016949	LARP1	99	63.185	Propithecus_coquereli
ENSELUG00000019403	larp1	99	62.044	ENSPVAG00000002262	LARP1	99	61.825	Pteropus_vampyrus
ENSELUG00000019403	larp1	99	78.519	ENSPNYG00000007938	larp1	98	81.263	Pundamilia_nyererei
ENSELUG00000019403	larp1	100	74.746	ENSPNAG00000021427	larp1	100	76.596	Pygocentrus_nattereri
ENSELUG00000019403	larp1	87	66.632	ENSRNOG00000031544	Larp1	98	64.876	Rattus_norvegicus
ENSELUG00000019403	larp1	87	68.285	ENSRBIG00000038005	LARP1	93	67.562	Rhinopithecus_bieti
ENSELUG00000019403	larp1	87	68.285	ENSRROG00000034073	LARP1	98	69.008	Rhinopithecus_roxellana
ENSELUG00000019403	larp1	87	68.149	ENSSBOG00000019816	LARP1	99	65.041	Saimiri_boliviensis_boliviensis
ENSELUG00000019403	larp1	87	70.084	ENSSHAG00000011115	LARP1	99	69.247	Sarcophilus_harrisii
ENSELUG00000019403	larp1	87	78.964	ENSSFOG00015020304	larp1	94	77.823	Scleropages_formosus
ENSELUG00000019403	larp1	99	73.483	ENSSFOG00015018058	-	99	74.091	Scleropages_formosus
ENSELUG00000019403	larp1	95	76.534	ENSSMAG00000007468	larp1	98	77.595	Scophthalmus_maximus
ENSELUG00000019403	larp1	99	78.203	ENSSDUG00000000268	larp1	99	78.304	Seriola_dumerili
ENSELUG00000019403	larp1	82	79.638	ENSSLDG00000016505	larp1	98	79.299	Seriola_lalandi_dorsalis
ENSELUG00000019403	larp1	57	80.364	ENSSARG00000013907	-	87	80.364	Sorex_araneus
ENSELUG00000019403	larp1	99	66.190	ENSSPUG00000012179	-	99	66.458	Sphenodon_punctatus
ENSELUG00000019403	larp1	99	78.760	ENSSPAG00000003910	larp1	99	78.396	Stegastes_partitus
ENSELUG00000019403	larp1	99	62.567	ENSSSCG00000017069	LARP1	99	68.381	Sus_scrofa
ENSELUG00000019403	larp1	84	71.474	ENSTGUG00000000704	LARP1	100	71.383	Taeniopygia_guttata
ENSELUG00000019403	larp1	99	76.944	ENSTRUG00000009470	larp1	99	76.937	Takifugu_rubripes
ENSELUG00000019403	larp1	82	67.696	ENSTBEG00000003381	LARP1	99	66.997	Tupaia_belangeri
ENSELUG00000019403	larp1	86	68.063	ENSTTRG00000015934	LARP1	99	67.425	Tursiops_truncatus
ENSELUG00000019403	larp1	99	62.133	ENSUAMG00000019334	LARP1	99	62.109	Ursus_americanus
ENSELUG00000019403	larp1	87	65.975	ENSUMAG00000002934	LARP1	98	65.456	Ursus_maritimus
ENSELUG00000019403	larp1	81	69.855	ENSVVUG00000004644	LARP1	98	67.181	Vulpes_vulpes
ENSELUG00000019403	larp1	90	71.341	ENSXETG00000008413	larp1	93	71.136	Xenopus_tropicalis
ENSELUG00000019403	larp1	87	80.371	ENSXCOG00000004022	larp1	98	79.893	Xiphophorus_couchianus
ENSELUG00000019403	larp1	98	76.498	ENSXMAG00000018780	larp1	99	74.754	Xiphophorus_maculatus