EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000019499 (Gene tree)
Gene ID: -
Gene Symbol: chd3
Alias: -
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 15632 bases
Position: chrLG24:10534377-10550008
Accession: 105031481
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000039322	ResIII	PF04851.15	2.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000030542	-	4704	XM_020043328	ENSELUP00000039322	1567 (aa)	XP_019898887	-

Gene Model

Click here to download ENSELUG00000019499's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000019499's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000019499	chd3	99	76.190	ENSELUG00000018086	-	84	76.190
ENSELUG00000019499	chd3	99	80.952	ENSELUG00000021276	chd4a	84	80.952
ENSELUG00000019499	chd3	60	36.054	ENSELUG00000017981	chd2	52	35.656
ENSELUG00000019499	chd3	98	89.116	ENSELUG00000010742	chd5	83	89.116

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000019499	chd3	99	90.476	ENSG00000170004	CHD3	78	90.476	Homo_sapiens
ENSELUG00000019499	chd3	99	96.644	ENSAPOG00000005614	chd3	96	96.644	Acanthochromis_polyacanthus
ENSELUG00000019499	chd3	69	83.636	ENSAMEG00000003025	-	78	83.636	Ailuropoda_melanoleuca
ENSELUG00000019499	chd3	99	83.767	ENSACIG00000019671	chd3	100	83.045	Amphilophus_citrinellus
ENSELUG00000019499	chd3	99	97.279	ENSAOCG00000023784	chd3	99	82.001	Amphiprion_ocellaris
ENSELUG00000019499	chd3	99	97.279	ENSAPEG00000006341	chd3	75	97.279	Amphiprion_percula
ENSELUG00000019499	chd3	99	96.622	ENSATEG00000000848	chd3	92	96.622	Anabas_testudineus
ENSELUG00000019499	chd3	99	91.837	ENSACAG00000004276	CHD3	74	91.837	Anolis_carolinensis
ENSELUG00000019499	chd3	99	90.476	ENSANAG00000034323	CHD3	83	90.476	Aotus_nancymaae
ENSELUG00000019499	chd3	99	80.367	ENSACLG00000009222	chd3	87	80.269	Astatotilapia_calliptera
ENSELUG00000019499	chd3	99	77.528	ENSBTAG00000014377	CHD3	81	77.512	Bos_taurus
ENSELUG00000019499	chd3	99	90.476	ENSCJAG00000014766	CHD3	78	90.476	Callithrix_jacchus
ENSELUG00000019499	chd3	99	90.476	ENSCAFG00000016859	CHD3	77	90.476	Canis_familiaris
ENSELUG00000019499	chd3	99	90.476	ENSCAFG00020007422	CHD3	84	90.476	Canis_lupus_dingo
ENSELUG00000019499	chd3	99	90.476	ENSCHIG00000016737	CHD3	79	77.435	Capra_hircus
ENSELUG00000019499	chd3	99	77.311	ENSTSYG00000035658	CHD3	86	77.049	Carlito_syrichta
ENSELUG00000019499	chd3	99	73.880	ENSCAPG00000014864	CHD3	80	73.548	Cavia_aperea
ENSELUG00000019499	chd3	99	77.101	ENSCPOG00000022653	CHD3	80	76.767	Cavia_porcellus
ENSELUG00000019499	chd3	99	90.476	ENSCCAG00000034792	CHD3	77	90.476	Cebus_capucinus
ENSELUG00000019499	chd3	99	90.476	ENSCATG00000041717	CHD3	78	90.476	Cercocebus_atys
ENSELUG00000019499	chd3	99	90.476	ENSCLAG00000010523	CHD3	79	90.476	Chinchilla_lanigera
ENSELUG00000019499	chd3	99	90.476	ENSCSAG00000011122	CHD3	78	90.476	Chlorocebus_sabaeus
ENSELUG00000019499	chd3	99	92.466	ENSCPBG00000011966	CHD3	92	91.946	Chrysemys_picta_bellii
ENSELUG00000019499	chd3	99	90.476	ENSCANG00000037641	CHD3	84	90.476	Colobus_angolensis_palliatus
ENSELUG00000019499	chd3	99	90.476	ENSCGRG00001011306	Chd3	79	90.476	Cricetulus_griseus_chok1gshd
ENSELUG00000019499	chd3	88	89.157	ENSCGRG00000007878	Chd3	75	89.157	Cricetulus_griseus_crigri
ENSELUG00000019499	chd3	99	97.279	ENSCSEG00000004489	chd3	84	97.279	Cynoglossus_semilaevis
ENSELUG00000019499	chd3	99	95.946	ENSCVAG00000007293	chd3	85	95.946	Cyprinodon_variegatus
ENSELUG00000019499	chd3	99	94.558	ENSDARG00000021405	chd3	86	94.558	Danio_rerio
ENSELUG00000019499	chd3	88	84.764	ENSDNOG00000047846	CHD3	69	84.764	Dasypus_novemcinctus
ENSELUG00000019499	chd3	99	90.476	ENSDORG00000010713	Chd3	80	90.476	Dipodomys_ordii
ENSELUG00000019499	chd3	99	89.116	ENSETEG00000017733	CHD3	80	89.116	Echinops_telfairi
ENSELUG00000019499	chd3	78	84.354	ENSEBUG00000008310	chd3	80	84.354	Eptatretus_burgeri
ENSELUG00000019499	chd3	99	77.311	ENSEASG00005019360	CHD3	86	77.575	Equus_asinus_asinus
ENSELUG00000019499	chd3	99	77.311	ENSECAG00000010051	CHD3	86	77.575	Equus_caballus
ENSELUG00000019499	chd3	95	90.244	ENSEEUG00000015205	CHD3	75	90.244	Erinaceus_europaeus
ENSELUG00000019499	chd3	99	89.116	ENSFCAG00000009629	CHD3	75	89.116	Felis_catus
ENSELUG00000019499	chd3	99	90.476	ENSFDAG00000008220	CHD3	77	90.476	Fukomys_damarensis
ENSELUG00000019499	chd3	99	95.238	ENSGMOG00000013599	chd3	77	95.238	Gadus_morhua
ENSELUG00000019499	chd3	69	84.516	ENSGAFG00000004055	chd3	91	84.516	Gambusia_affinis
ENSELUG00000019499	chd3	99	95.238	ENSGACG00000019275	chd3	79	95.238	Gasterosteus_aculeatus
ENSELUG00000019499	chd3	85	87.179	ENSGAGG00000013164	CHD3	99	71.693	Gopherus_agassizii
ENSELUG00000019499	chd3	99	90.476	ENSGGOG00000013496	CHD3	84	90.476	Gorilla_gorilla
ENSELUG00000019499	chd3	99	90.476	ENSHGLG00000012017	CHD3	77	90.476	Heterocephalus_glaber_female
ENSELUG00000019499	chd3	83	91.753	ENSHGLG00100013902	CHD3	76	91.753	Heterocephalus_glaber_male
ENSELUG00000019499	chd3	99	95.238	ENSHCOG00000010170	chd3	77	95.238	Hippocampus_comes
ENSELUG00000019499	chd3	99	96.732	ENSIPUG00000003271	chd3	89	96.732	Ictalurus_punctatus
ENSELUG00000019499	chd3	99	90.476	ENSSTOG00000025907	CHD3	80	90.476	Ictidomys_tridecemlineatus
ENSELUG00000019499	chd3	99	90.476	ENSJJAG00000017633	Chd3	79	90.476	Jaculus_jaculus
ENSELUG00000019499	chd3	99	95.918	ENSKMAG00000019292	chd3	83	95.918	Kryptolebias_marmoratus
ENSELUG00000019499	chd3	99	96.599	ENSLBEG00000028485	chd3	80	96.599	Labrus_bergylta
ENSELUG00000019499	chd3	98	91.837	ENSLACG00000008031	CHD3	80	91.837	Latimeria_chalumnae
ENSELUG00000019499	chd3	99	93.919	ENSLOCG00000013965	chd3	75	93.919	Lepisosteus_oculatus
ENSELUG00000019499	chd3	99	90.476	ENSLAFG00000000572	CHD3	78	90.476	Loxodonta_africana
ENSELUG00000019499	chd3	99	90.476	ENSMFAG00000020113	CHD3	83	90.476	Macaca_fascicularis
ENSELUG00000019499	chd3	99	90.476	ENSMMUG00000022221	CHD3	77	90.476	Macaca_mulatta
ENSELUG00000019499	chd3	99	90.476	ENSMNEG00000001728	CHD3	78	90.476	Macaca_nemestrina
ENSELUG00000019499	chd3	99	90.476	ENSMLEG00000032249	CHD3	78	90.476	Mandrillus_leucophaeus
ENSELUG00000019499	chd3	99	96.644	ENSMAMG00000000564	chd3	93	96.644	Mastacembelus_armatus
ENSELUG00000019499	chd3	99	90.476	ENSMAUG00000013873	Chd3	84	90.476	Mesocricetus_auratus
ENSELUG00000019499	chd3	99	90.476	ENSMICG00000008741	CHD3	76	90.476	Microcebus_murinus
ENSELUG00000019499	chd3	99	90.476	ENSMOCG00000004848	Chd3	80	90.476	Microtus_ochrogaster
ENSELUG00000019499	chd3	99	97.279	ENSMMOG00000012699	chd3	83	97.279	Mola_mola
ENSELUG00000019499	chd3	99	90.476	ENSMODG00000007509	CHD3	86	90.476	Monodelphis_domestica
ENSELUG00000019499	chd3	99	90.476	MGP_CAROLIEiJ_G0016564	Chd3	82	90.476	Mus_caroli
ENSELUG00000019499	chd3	99	90.476	ENSMUSG00000018474	Chd3	81	90.476	Mus_musculus
ENSELUG00000019499	chd3	99	90.476	MGP_PahariEiJ_G0017695	Chd3	81	90.476	Mus_pahari
ENSELUG00000019499	chd3	99	90.476	MGP_SPRETEiJ_G0017400	Chd3	81	90.476	Mus_spretus
ENSELUG00000019499	chd3	92	79.244	ENSMPUG00000008861	CHD3	87	79.289	Mustela_putorius_furo
ENSELUG00000019499	chd3	99	77.397	ENSMLUG00000014643	-	80	77.171	Myotis_lucifugus
ENSELUG00000019499	chd3	99	90.476	ENSNGAG00000000773	Chd3	76	90.476	Nannospalax_galili
ENSELUG00000019499	chd3	99	95.333	ENSNBRG00000000636	chd3	91	95.333	Neolamprologus_brichardi
ENSELUG00000019499	chd3	99	88.435	ENSNLEG00000009770	CHD3	80	88.435	Nomascus_leucogenys
ENSELUG00000019499	chd3	88	90.476	ENSMEUG00000005852	CHD3	71	90.476	Notamacropus_eugenii
ENSELUG00000019499	chd3	99	90.476	ENSOPRG00000011069	CHD3	82	90.476	Ochotona_princeps
ENSELUG00000019499	chd3	99	90.476	ENSODEG00000017785	CHD3	77	90.476	Octodon_degus
ENSELUG00000019499	chd3	99	96.599	ENSONIG00000009292	chd3	80	96.599	Oreochromis_niloticus
ENSELUG00000019499	chd3	97	76.880	ENSOCUG00000029299	CHD3	77	76.367	Oryctolagus_cuniculus
ENSELUG00000019499	chd3	90	81.716	ENSORLG00000007107	chd3	82	81.123	Oryzias_latipes
ENSELUG00000019499	chd3	66	80.962	ENSORLG00020008387	chd3	86	79.943	Oryzias_latipes_hni
ENSELUG00000019499	chd3	99	84.278	ENSOMEG00000013691	chd3	94	85.149	Oryzias_melastigma
ENSELUG00000019499	chd3	99	77.311	ENSOGAG00000003216	CHD3	80	77.101	Otolemur_garnettii
ENSELUG00000019499	chd3	99	77.189	ENSOARG00000017855	CHD3	80	77.119	Ovis_aries
ENSELUG00000019499	chd3	99	90.476	ENSPPAG00000032886	CHD3	83	90.476	Pan_paniscus
ENSELUG00000019499	chd3	99	89.796	ENSPPRG00000000626	CHD3	78	89.796	Panthera_pardus
ENSELUG00000019499	chd3	99	90.476	ENSPTRG00000008714	CHD3	84	90.476	Pan_troglodytes
ENSELUG00000019499	chd3	99	90.476	ENSPANG00000023938	CHD3	83	90.476	Papio_anubis
ENSELUG00000019499	chd3	99	95.918	ENSPKIG00000006305	chd3	80	95.946	Paramormyrops_kingsleyae
ENSELUG00000019499	chd3	69	78.494	ENSPSIG00000010177	CHD3	97	79.562	Pelodiscus_sinensis
ENSELUG00000019499	chd3	99	90.476	ENSPEMG00000014262	Chd3	77	90.476	Peromyscus_maniculatus_bairdii
ENSELUG00000019499	chd3	99	90.541	ENSPCIG00000005442	CHD3	86	90.541	Phascolarctos_cinereus
ENSELUG00000019499	chd3	99	97.279	ENSPFOG00000012464	chd3	72	97.279	Poecilia_formosa
ENSELUG00000019499	chd3	99	97.279	ENSPLAG00000002887	chd3	82	97.279	Poecilia_latipinna
ENSELUG00000019499	chd3	66	87.327	ENSPMEG00000016725	chd3	83	81.442	Poecilia_mexicana
ENSELUG00000019499	chd3	99	81.779	ENSPREG00000011044	chd3	86	82.414	Poecilia_reticulata
ENSELUG00000019499	chd3	99	74.020	ENSPPYG00000007940	CHD3	81	73.669	Pongo_abelii
ENSELUG00000019499	chd3	95	90.476	ENSPCAG00000004350	CHD3	75	90.476	Procavia_capensis
ENSELUG00000019499	chd3	99	77.381	ENSPCOG00000020952	CHD3	82	76.572	Propithecus_coquereli
ENSELUG00000019499	chd3	83	90.476	ENSPVAG00000016344	CHD3	65	90.476	Pteropus_vampyrus
ENSELUG00000019499	chd3	99	97.279	ENSPNAG00000020393	chd3	92	85.232	Pygocentrus_nattereri
ENSELUG00000019499	chd3	99	90.476	ENSRNOG00000009722	Chd3	84	90.476	Rattus_norvegicus
ENSELUG00000019499	chd3	99	90.476	ENSRBIG00000033562	CHD3	84	90.476	Rhinopithecus_bieti
ENSELUG00000019499	chd3	99	90.476	ENSRROG00000029554	CHD3	83	90.476	Rhinopithecus_roxellana
ENSELUG00000019499	chd3	99	90.476	ENSSBOG00000020719	CHD3	84	90.476	Saimiri_boliviensis_boliviensis
ENSELUG00000019499	chd3	99	80.000	ENSSHAG00000014412	CHD3	82	79.330	Sarcophilus_harrisii
ENSELUG00000019499	chd3	95	97.279	ENSSFOG00015023123	chd3	83	97.279	Scleropages_formosus
ENSELUG00000019499	chd3	99	97.279	ENSSMAG00000006451	chd3	93	96.644	Scophthalmus_maximus
ENSELUG00000019499	chd3	64	81.287	ENSSDUG00000005792	chd3	88	81.719	Seriola_dumerili
ENSELUG00000019499	chd3	99	97.279	ENSSPAG00000013694	chd3	99	82.284	Stegastes_partitus
ENSELUG00000019499	chd3	99	90.541	ENSSSCG00000021363	CHD3	90	89.933	Sus_scrofa
ENSELUG00000019499	chd3	90	82.935	ENSTRUG00000014990	chd3	83	82.679	Takifugu_rubripes
ENSELUG00000019499	chd3	99	95.918	ENSTNIG00000012998	chd3	80	95.918	Tetraodon_nigroviridis
ENSELUG00000019499	chd3	75	90.244	ENSTBEG00000011454	-	67	90.244	Tupaia_belangeri
ENSELUG00000019499	chd3	95	89.796	ENSTTRG00000010295	CHD3	75	89.796	Tursiops_truncatus
ENSELUG00000019499	chd3	99	90.476	ENSUAMG00000005475	CHD3	85	90.476	Ursus_americanus
ENSELUG00000019499	chd3	64	88.545	ENSVPAG00000010794	-	56	88.545	Vicugna_pacos
ENSELUG00000019499	chd3	99	90.476	ENSVVUG00000028011	CHD3	81	90.476	Vulpes_vulpes
ENSELUG00000019499	chd3	99	91.837	ENSXETG00000012991	chd3	75	91.837	Xenopus_tropicalis
ENSELUG00000019499	chd3	62	88.018	ENSXCOG00000000809	chd3	85	88.552	Xiphophorus_couchianus
ENSELUG00000019499	chd3	99	82.696	ENSXMAG00000016035	chd3	99	83.145	Xiphophorus_maculatus