EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000019560 (Gene tree)
Gene ID: 105016629
Gene Symbol: rnaseh2b
Alias: zgc:56602
Full Name: ribonuclease H2 subunit B
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 11220 bases
Position: chrLG16:31379152-31390371
Accession: 105016629
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000039413	RNase_H2-Ydr279	PF09468.10	7.8e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000030758	-	3510	XM_010880585	ENSELUP00000039413	307 (aa)	XP_010878887	UPI000576A9E3

Gene Model

Click here to download ENSELUG00000019560's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000019560's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000019560	rnaseh2b	93	48.621	ENSG00000136104	RNASEH2B	92	60.345	Homo_sapiens
ENSELUG00000019560	rnaseh2b	100	76.547	ENSAPOG00000010496	rnaseh2b	100	76.547	Acanthochromis_polyacanthus
ENSELUG00000019560	rnaseh2b	91	48.239	ENSAMEG00000012040	RNASEH2B	95	48.582	Ailuropoda_melanoleuca
ENSELUG00000019560	rnaseh2b	100	65.147	ENSACIG00000021991	rnaseh2b	100	67.476	Amphilophus_citrinellus
ENSELUG00000019560	rnaseh2b	100	76.221	ENSAOCG00000013398	rnaseh2b	100	76.221	Amphiprion_ocellaris
ENSELUG00000019560	rnaseh2b	100	75.896	ENSAPEG00000006033	rnaseh2b	100	75.896	Amphiprion_percula
ENSELUG00000019560	rnaseh2b	100	76.547	ENSATEG00000008370	rnaseh2b	100	76.547	Anabas_testudineus
ENSELUG00000019560	rnaseh2b	83	61.089	ENSAPLG00000008955	RNASEH2B	99	61.397	Anas_platyrhynchos
ENSELUG00000019560	rnaseh2b	93	54.483	ENSACAG00000011679	RNASEH2B	97	54.483	Anolis_carolinensis
ENSELUG00000019560	rnaseh2b	93	48.966	ENSANAG00000020662	RNASEH2B	93	48.966	Aotus_nancymaae
ENSELUG00000019560	rnaseh2b	100	73.290	ENSACLG00000000467	rnaseh2b	100	73.290	Astatotilapia_calliptera
ENSELUG00000019560	rnaseh2b	99	71.569	ENSAMXG00000014351	rnaseh2b	99	71.569	Astyanax_mexicanus
ENSELUG00000019560	rnaseh2b	89	49.643	ENSBTAG00000020149	RNASEH2B	90	49.643	Bos_taurus
ENSELUG00000019560	rnaseh2b	93	48.264	ENSCJAG00000008585	-	94	48.264	Callithrix_jacchus
ENSELUG00000019560	rnaseh2b	75	44.206	ENSCJAG00000003822	-	86	44.206	Callithrix_jacchus
ENSELUG00000019560	rnaseh2b	91	47.670	ENSCAFG00000004295	RNASEH2B	90	48.736	Canis_familiaris
ENSELUG00000019560	rnaseh2b	94	46.552	ENSCAFG00020000250	RNASEH2B	95	47.241	Canis_lupus_dingo
ENSELUG00000019560	rnaseh2b	75	49.138	ENSCHIG00000012982	-	82	49.138	Capra_hircus
ENSELUG00000019560	rnaseh2b	90	49.821	ENSCHIG00000018220	RNASEH2B	97	47.157	Capra_hircus
ENSELUG00000019560	rnaseh2b	91	49.466	ENSTSYG00000009176	-	91	49.466	Carlito_syrichta
ENSELUG00000019560	rnaseh2b	90	42.294	ENSTSYG00000031177	-	90	42.294	Carlito_syrichta
ENSELUG00000019560	rnaseh2b	91	42.294	ENSCAPG00000009978	RNASEH2B	94	42.857	Cavia_aperea
ENSELUG00000019560	rnaseh2b	91	48.214	ENSCPOG00000032527	RNASEH2B	90	48.214	Cavia_porcellus
ENSELUG00000019560	rnaseh2b	93	49.306	ENSCCAG00000026979	RNASEH2B	94	49.306	Cebus_capucinus
ENSELUG00000019560	rnaseh2b	91	48.410	ENSCATG00000031336	RNASEH2B	79	48.410	Cercocebus_atys
ENSELUG00000019560	rnaseh2b	90	51.625	ENSCLAG00000003517	RNASEH2B	76	51.625	Chinchilla_lanigera
ENSELUG00000019560	rnaseh2b	89	49.104	ENSCSAG00000017701	RNASEH2B	87	47.917	Chlorocebus_sabaeus
ENSELUG00000019560	rnaseh2b	95	39.189	ENSCHOG00000013688	RNASEH2B	96	40.541	Choloepus_hoffmanni
ENSELUG00000019560	rnaseh2b	99	56.818	ENSCPBG00000008684	RNASEH2B	95	56.818	Chrysemys_picta_bellii
ENSELUG00000019560	rnaseh2b	87	34.164	ENSCING00000016454	-	90	34.164	Ciona_intestinalis
ENSELUG00000019560	rnaseh2b	91	49.296	ENSCANG00000041511	-	93	48.123	Colobus_angolensis_palliatus
ENSELUG00000019560	rnaseh2b	91	50.896	ENSCGRG00001000611	Rnaseh2b	94	50.000	Cricetulus_griseus_chok1gshd
ENSELUG00000019560	rnaseh2b	91	50.896	ENSCGRG00000006077	Rnaseh2b	94	50.000	Cricetulus_griseus_crigri
ENSELUG00000019560	rnaseh2b	100	74.267	ENSCSEG00000004910	rnaseh2b	100	74.267	Cynoglossus_semilaevis
ENSELUG00000019560	rnaseh2b	100	73.616	ENSCVAG00000005212	rnaseh2b	100	73.616	Cyprinodon_variegatus
ENSELUG00000019560	rnaseh2b	99	69.935	ENSDARG00000005128	rnaseh2b	99	69.935	Danio_rerio
ENSELUG00000019560	rnaseh2b	90	49.097	ENSDNOG00000049666	-	89	49.097	Dasypus_novemcinctus
ENSELUG00000019560	rnaseh2b	98	43.421	ENSDNOG00000034290	-	98	43.421	Dasypus_novemcinctus
ENSELUG00000019560	rnaseh2b	90	51.254	ENSDORG00000010708	Rnaseh2b	89	51.254	Dipodomys_ordii
ENSELUG00000019560	rnaseh2b	83	40.392	ENSEBUG00000005965	rnaseh2b	97	40.234	Eptatretus_burgeri
ENSELUG00000019560	rnaseh2b	91	50.178	ENSEASG00005017323	RNASEH2B	90	50.178	Equus_asinus_asinus
ENSELUG00000019560	rnaseh2b	91	50.178	ENSECAG00000014262	RNASEH2B	90	50.178	Equus_caballus
ENSELUG00000019560	rnaseh2b	88	47.985	ENSFCAG00000014257	RNASEH2B	84	48.162	Felis_catus
ENSELUG00000019560	rnaseh2b	93	59.375	ENSFALG00000008435	RNASEH2B	98	59.375	Ficedula_albicollis
ENSELUG00000019560	rnaseh2b	91	49.104	ENSFDAG00000009920	RNASEH2B	97	49.104	Fukomys_damarensis
ENSELUG00000019560	rnaseh2b	100	75.570	ENSFHEG00000012160	rnaseh2b	100	75.570	Fundulus_heteroclitus
ENSELUG00000019560	rnaseh2b	100	65.495	ENSGMOG00000016830	rnaseh2b	100	65.495	Gadus_morhua
ENSELUG00000019560	rnaseh2b	95	56.803	ENSGALG00000017015	RNASEH2B	100	57.282	Gallus_gallus
ENSELUG00000019560	rnaseh2b	100	73.290	ENSGAFG00000021222	rnaseh2b	100	73.290	Gambusia_affinis
ENSELUG00000019560	rnaseh2b	100	70.607	ENSGACG00000002821	rnaseh2b	100	70.607	Gasterosteus_aculeatus
ENSELUG00000019560	rnaseh2b	90	60.215	ENSGAGG00000014722	RNASEH2B	99	60.215	Gopherus_agassizii
ENSELUG00000019560	rnaseh2b	91	49.296	ENSGGOG00000001044	RNASEH2B	93	48.123	Gorilla_gorilla
ENSELUG00000019560	rnaseh2b	100	73.941	ENSHBUG00000006049	rnaseh2b	100	73.941	Haplochromis_burtoni
ENSELUG00000019560	rnaseh2b	91	50.179	ENSHGLG00100015953	RNASEH2B	94	50.542	Heterocephalus_glaber_male
ENSELUG00000019560	rnaseh2b	100	68.932	ENSHCOG00000003318	rnaseh2b	100	68.932	Hippocampus_comes
ENSELUG00000019560	rnaseh2b	100	74.267	ENSIPUG00000023815	rnaseh2b	100	74.267	Ictalurus_punctatus
ENSELUG00000019560	rnaseh2b	90	51.079	ENSSTOG00000015126	RNASEH2B	94	51.449	Ictidomys_tridecemlineatus
ENSELUG00000019560	rnaseh2b	87	50.746	ENSJJAG00000013335	Rnaseh2b	90	50.746	Jaculus_jaculus
ENSELUG00000019560	rnaseh2b	100	76.221	ENSKMAG00000002198	rnaseh2b	100	76.221	Kryptolebias_marmoratus
ENSELUG00000019560	rnaseh2b	100	76.221	ENSLBEG00000019331	rnaseh2b	100	76.221	Labrus_bergylta
ENSELUG00000019560	rnaseh2b	73	59.649	ENSLACG00000010782	RNASEH2B	92	59.649	Latimeria_chalumnae
ENSELUG00000019560	rnaseh2b	100	68.078	ENSLOCG00000009296	rnaseh2b	100	68.078	Lepisosteus_oculatus
ENSELUG00000019560	rnaseh2b	91	48.387	ENSLAFG00000030158	RNASEH2B	90	48.387	Loxodonta_africana
ENSELUG00000019560	rnaseh2b	91	49.822	ENSMFAG00000038464	-	93	48.621	Macaca_fascicularis
ENSELUG00000019560	rnaseh2b	93	46.552	ENSMMUG00000021746	RNASEH2B	92	46.552	Macaca_mulatta
ENSELUG00000019560	rnaseh2b	91	49.822	ENSMNEG00000030580	RNASEH2B	93	48.621	Macaca_nemestrina
ENSELUG00000019560	rnaseh2b	91	49.296	ENSMLEG00000043911	-	93	48.123	Mandrillus_leucophaeus
ENSELUG00000019560	rnaseh2b	100	74.919	ENSMAMG00000017109	rnaseh2b	100	74.919	Mastacembelus_armatus
ENSELUG00000019560	rnaseh2b	100	68.932	ENSMZEG00005021926	rnaseh2b	100	68.932	Maylandia_zebra
ENSELUG00000019560	rnaseh2b	88	58.974	ENSMGAG00000015025	RNASEH2B	100	59.375	Meleagris_gallopavo
ENSELUG00000019560	rnaseh2b	90	50.181	ENSMAUG00000016520	Rnaseh2b	90	50.896	Mesocricetus_auratus
ENSELUG00000019560	rnaseh2b	91	48.754	ENSMICG00000000528	RNASEH2B	94	47.260	Microcebus_murinus
ENSELUG00000019560	rnaseh2b	99	71.569	ENSMMOG00000019799	rnaseh2b	100	73.868	Mola_mola
ENSELUG00000019560	rnaseh2b	98	52.145	ENSMODG00000010775	RNASEH2B	99	52.145	Monodelphis_domestica
ENSELUG00000019560	rnaseh2b	99	76.471	ENSMALG00000004463	rnaseh2b	100	76.471	Monopterus_albus
ENSELUG00000019560	rnaseh2b	72	53.333	MGP_CAROLIEiJ_G0019389	Rnaseh2b	81	54.626	Mus_caroli
ENSELUG00000019560	rnaseh2b	87	52.593	ENSMUSG00000021932	Rnaseh2b	89	52.158	Mus_musculus
ENSELUG00000019560	rnaseh2b	95	40.059	MGP_PahariEiJ_G0030407	-	96	40.059	Mus_pahari
ENSELUG00000019560	rnaseh2b	72	44.545	ENSMPUG00000018010	RNASEH2B	91	44.954	Mustela_putorius_furo
ENSELUG00000019560	rnaseh2b	91	51.601	ENSMLUG00000004065	-	93	50.345	Myotis_lucifugus
ENSELUG00000019560	rnaseh2b	100	73.941	ENSNBRG00000003253	rnaseh2b	100	73.941	Neolamprologus_brichardi
ENSELUG00000019560	rnaseh2b	91	49.296	ENSNLEG00000003804	RNASEH2B	93	48.123	Nomascus_leucogenys
ENSELUG00000019560	rnaseh2b	92	55.088	ENSMEUG00000003665	RNASEH2B	97	55.088	Notamacropus_eugenii
ENSELUG00000019560	rnaseh2b	52	43.210	ENSOPRG00000003695	-	51	46.341	Ochotona_princeps
ENSELUG00000019560	rnaseh2b	73	45.982	ENSODEG00000005412	-	86	48.095	Octodon_degus
ENSELUG00000019560	rnaseh2b	94	48.966	ENSODEG00000006793	-	94	48.966	Octodon_degus
ENSELUG00000019560	rnaseh2b	100	74.267	ENSONIG00000006657	rnaseh2b	100	74.267	Oreochromis_niloticus
ENSELUG00000019560	rnaseh2b	91	56.446	ENSOANG00000015537	RNASEH2B	98	56.446	Ornithorhynchus_anatinus
ENSELUG00000019560	rnaseh2b	92	45.390	ENSOCUG00000008904	RNASEH2B	88	47.500	Oryctolagus_cuniculus
ENSELUG00000019560	rnaseh2b	99	71.947	ENSORLG00000011850	rnaseh2b	100	71.947	Oryzias_latipes
ENSELUG00000019560	rnaseh2b	99	71.617	ENSORLG00020012081	rnaseh2b	100	71.617	Oryzias_latipes_hni
ENSELUG00000019560	rnaseh2b	99	70.957	ENSORLG00015015468	rnaseh2b	100	70.957	Oryzias_latipes_hsok
ENSELUG00000019560	rnaseh2b	99	71.617	ENSOMEG00000012441	rnaseh2b	100	71.617	Oryzias_melastigma
ENSELUG00000019560	rnaseh2b	87	50.549	ENSOGAG00000016486	RNASEH2B	91	50.549	Otolemur_garnettii
ENSELUG00000019560	rnaseh2b	90	49.821	ENSOARG00000008701	RNASEH2B	93	50.181	Ovis_aries
ENSELUG00000019560	rnaseh2b	87	50.549	ENSPPAG00000026374	RNASEH2B	93	47.196	Pan_paniscus
ENSELUG00000019560	rnaseh2b	91	47.018	ENSPPRG00000012450	RNASEH2B	92	47.018	Panthera_pardus
ENSELUG00000019560	rnaseh2b	87	48.540	ENSPTIG00000013918	RNASEH2B	97	48.540	Panthera_tigris_altaica
ENSELUG00000019560	rnaseh2b	93	48.123	ENSPTRG00000005886	RNASEH2B	95	52.191	Pan_troglodytes
ENSELUG00000019560	rnaseh2b	91	49.296	ENSPANG00000022424	-	93	48.123	Papio_anubis
ENSELUG00000019560	rnaseh2b	100	67.427	ENSPKIG00000013386	rnaseh2b	100	67.427	Paramormyrops_kingsleyae
ENSELUG00000019560	rnaseh2b	56	56.069	ENSPSIG00000002224	RNASEH2B	80	56.069	Pelodiscus_sinensis
ENSELUG00000019560	rnaseh2b	65	69.500	ENSPMGG00000010299	rnaseh2b	97	69.500	Periophthalmus_magnuspinnatus
ENSELUG00000019560	rnaseh2b	91	50.538	ENSPEMG00000019721	Rnaseh2b	94	49.315	Peromyscus_maniculatus_bairdii
ENSELUG00000019560	rnaseh2b	91	51.613	ENSPCIG00000014535	-	94	51.613	Phascolarctos_cinereus
ENSELUG00000019560	rnaseh2b	100	73.786	ENSPFOG00000016722	rnaseh2b	100	73.786	Poecilia_formosa
ENSELUG00000019560	rnaseh2b	100	73.941	ENSPLAG00000011755	rnaseh2b	100	73.941	Poecilia_latipinna
ENSELUG00000019560	rnaseh2b	100	74.267	ENSPMEG00000002721	rnaseh2b	100	74.267	Poecilia_mexicana
ENSELUG00000019560	rnaseh2b	100	73.616	ENSPREG00000007737	rnaseh2b	100	73.616	Poecilia_reticulata
ENSELUG00000019560	rnaseh2b	93	48.123	ENSPPYG00000005378	RNASEH2B	93	48.123	Pongo_abelii
ENSELUG00000019560	rnaseh2b	91	49.291	ENSPCOG00000026623	RNASEH2B	94	47.782	Propithecus_coquereli
ENSELUG00000019560	rnaseh2b	79	47.561	ENSPVAG00000000508	RNASEH2B	92	47.561	Pteropus_vampyrus
ENSELUG00000019560	rnaseh2b	100	73.616	ENSPNYG00000013552	rnaseh2b	100	73.616	Pundamilia_nyererei
ENSELUG00000019560	rnaseh2b	99	72.222	ENSPNAG00000024825	rnaseh2b	99	72.222	Pygocentrus_nattereri
ENSELUG00000019560	rnaseh2b	91	50.534	ENSRNOG00000009192	Rnaseh2b	94	48.973	Rattus_norvegicus
ENSELUG00000019560	rnaseh2b	91	49.466	ENSRBIG00000028928	-	93	48.276	Rhinopithecus_bieti
ENSELUG00000019560	rnaseh2b	91	45.583	ENSRBIG00000036017	-	98	44.333	Rhinopithecus_bieti
ENSELUG00000019560	rnaseh2b	79	39.676	ENSRROG00000044915	-	92	40.984	Rhinopithecus_roxellana
ENSELUG00000019560	rnaseh2b	91	49.466	ENSRROG00000018808	-	93	48.276	Rhinopithecus_roxellana
ENSELUG00000019560	rnaseh2b	93	48.958	ENSSBOG00000008081	RNASEH2B	96	51.111	Saimiri_boliviensis_boliviensis
ENSELUG00000019560	rnaseh2b	100	52.258	ENSSHAG00000016190	RNASEH2B	100	52.922	Sarcophilus_harrisii
ENSELUG00000019560	rnaseh2b	99	69.281	ENSSFOG00015010190	rnaseh2b	100	69.281	Scleropages_formosus
ENSELUG00000019560	rnaseh2b	100	77.199	ENSSMAG00000001546	rnaseh2b	100	77.199	Scophthalmus_maximus
ENSELUG00000019560	rnaseh2b	100	78.176	ENSSDUG00000007567	rnaseh2b	100	78.176	Seriola_dumerili
ENSELUG00000019560	rnaseh2b	100	75.649	ENSSLDG00000012485	rnaseh2b	100	75.649	Seriola_lalandi_dorsalis
ENSELUG00000019560	rnaseh2b	84	54.023	ENSSPUG00000006745	-	94	54.023	Sphenodon_punctatus
ENSELUG00000019560	rnaseh2b	100	77.199	ENSSPAG00000020926	rnaseh2b	100	77.199	Stegastes_partitus
ENSELUG00000019560	rnaseh2b	86	50.373	ENSSSCG00000024385	RNASEH2B	95	52.033	Sus_scrofa
ENSELUG00000019560	rnaseh2b	88	61.765	ENSTGUG00000012104	RNASEH2B	99	61.765	Taeniopygia_guttata
ENSELUG00000019560	rnaseh2b	100	74.919	ENSTRUG00000015098	rnaseh2b	100	74.919	Takifugu_rubripes
ENSELUG00000019560	rnaseh2b	100	72.816	ENSTNIG00000013861	rnaseh2b	100	72.816	Tetraodon_nigroviridis
ENSELUG00000019560	rnaseh2b	90	43.214	ENSTTRG00000010761	RNASEH2B	90	43.929	Tursiops_truncatus
ENSELUG00000019560	rnaseh2b	91	49.110	ENSUAMG00000022849	RNASEH2B	96	50.000	Ursus_americanus
ENSELUG00000019560	rnaseh2b	91	48.399	ENSUMAG00000018556	RNASEH2B	96	49.259	Ursus_maritimus
ENSELUG00000019560	rnaseh2b	90	50.357	ENSVPAG00000005679	RNASEH2B	95	50.719	Vicugna_pacos
ENSELUG00000019560	rnaseh2b	91	48.387	ENSVVUG00000024015	RNASEH2B	83	50.181	Vulpes_vulpes
ENSELUG00000019560	rnaseh2b	99	53.571	ENSXETG00000020720	rnaseh2b	100	53.571	Xenopus_tropicalis
ENSELUG00000019560	rnaseh2b	100	73.377	ENSXCOG00000018732	rnaseh2b	100	73.377	Xiphophorus_couchianus
ENSELUG00000019560	rnaseh2b	100	74.593	ENSXMAG00000022554	rnaseh2b	100	74.593	Xiphophorus_maculatus