EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000019582 (Gene tree)
Gene ID: 105028709
Gene Symbol: -
Alias: -
Full Name: ADP-ribosylation factor 4
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 5746 bases
Position: chrLG19:22022616-22028361
Accession: 105028709
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000039428	MMR_HSR1	PF01926.23	4.6e-05	1	1
ENSELUP00000039432	MMR_HSR1	PF01926.23	5.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000041391	-	462	-	ENSELUP00000020327	153 (aa)	-	-
ENSELUT00000030752	-	829	-	ENSELUP00000039432	224 (aa)	-	-
ENSELUT00000030746	-	697	XM_010901630	ENSELUP00000039428	180 (aa)	XP_010899932	UPI000576DB20

Gene Model

Click here to download ENSELUG00000019582's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000019582's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000019582	-	96	45.506	ENSELUG00000004400	arl4cb	93	45.506
ENSELUG00000019582	-	94	42.222	ENSELUG00000023460	-	88	42.222
ENSELUG00000019582	-	100	83.333	ENSELUG00000022533	arf1	79	83.333
ENSELUG00000019582	-	97	46.286	ENSELUG00000022956	arl8	98	46.471
ENSELUG00000019582	-	100	45.604	ENSELUG00000016704	arl2	97	45.604
ENSELUG00000019582	-	100	56.667	ENSELUG00000018440	arl1	99	56.667
ENSELUG00000019582	-	95	42.775	ENSELUG00000003904	arl3l1	92	42.775
ENSELUG00000019582	-	98	83.051	ENSELUG00000019848	arf2a	98	83.051
ENSELUG00000019582	-	92	33.133	ENSELUG00000003984	arl8bb	68	33.133
ENSELUG00000019582	-	100	82.222	ENSELUG00000007225	-	99	82.222
ENSELUG00000019582	-	89	30.814	ENSELUG00000013652	sar1a	87	30.814
ENSELUG00000019582	-	99	39.444	ENSELUG00000013130	-	98	39.444
ENSELUG00000019582	-	89	31.977	ENSELUG00000020912	sar1b	87	31.977
ENSELUG00000019582	-	92	46.784	ENSELUG00000015699	arl4ca	90	46.784
ENSELUG00000019582	-	94	40.351	ENSELUG00000000140	arl11	94	40.351
ENSELUG00000019582	-	100	79.444	ENSELUG00000008395	ARF3	99	79.444
ENSELUG00000019582	-	99	75.419	ENSELUG00000014428	arf4	99	75.419
ENSELUG00000019582	-	79	33.333	ENSELUG00000010736	arl8a	77	33.333
ENSELUG00000019582	-	98	46.328	ENSELUG00000007052	arl5a	98	46.328
ENSELUG00000019582	-	98	41.899	ENSELUG00000016208	arl3l2	94	41.899
ENSELUG00000019582	-	86	46.203	ENSELUG00000024060	-	56	46.203
ENSELUG00000019582	-	98	45.763	ENSELUG00000016864	arl5c	98	45.763
ENSELUG00000019582	-	98	36.316	ENSELUG00000000269	ARL6	97	36.458
ENSELUG00000019582	-	92	44.048	ENSELUG00000018031	arl3	88	42.424
ENSELUG00000019582	-	58	32.824	ENSELUG00000024279	sar1ab	66	32.824
ENSELUG00000019582	-	95	40.000	ENSELUG00000002496	-	96	39.665
ENSELUG00000019582	-	83	34.839	ENSELUG00000011113	-	69	34.839
ENSELUG00000019582	-	79	33.333	ENSELUG00000003770	arl8a	78	32.877
ENSELUG00000019582	-	92	33.735	ENSELUG00000009390	arl8ba	89	33.735
ENSELUG00000019582	-	77	64.748	ENSELUG00000000436	-	87	64.748
ENSELUG00000019582	-	98	58.192	ENSELUG00000001287	-	98	58.192
ENSELUG00000019582	-	96	37.097	ENSELUG00000013412	arfrp1	91	37.097

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000019582	-	100	89.444	ENSCAFG00000001726	ARF5	100	89.444	Canis_familiaris
ENSELUG00000019582	-	84	90.728	ENSEASG00005008504	-	68	72.889	Equus_asinus_asinus
ENSELUG00000019582	-	84	90.728	ENSECAG00000020291	ARF5	68	72.889	Equus_caballus
ENSELUG00000019582	-	84	91.391	ENSGALG00000043476	-	99	91.391	Gallus_gallus
ENSELUG00000019582	-	84	93.377	ENSKMAG00000008864	-	94	91.195	Kryptolebias_marmoratus
ENSELUG00000019582	-	87	72.611	ENSLACG00000012168	-	97	75.658	Latimeria_chalumnae
ENSELUG00000019582	-	73	93.130	ENSMGAG00000008562	-	99	93.130	Meleagris_gallopavo
ENSELUG00000019582	-	84	94.702	ENSORLG00020003354	-	91	94.156	Oryzias_latipes_hni
ENSELUG00000019582	-	84	94.702	ENSORLG00015002471	-	91	82.967	Oryzias_latipes_hsok
ENSELUG00000019582	-	65	89.744	ENSPMAG00000005571	-	87	89.744	Petromyzon_marinus
ENSELUG00000019582	-	100	89.444	ENSSDUG00000014675	-	100	89.444	Seriola_dumerili
ENSELUG00000019582	-	62	95.495	ENSSLDG00000005491	-	98	95.495	Seriola_lalandi_dorsalis
ENSELUG00000019582	-	84	90.728	ENSSPUG00000004465	-	87	88.535	Sphenodon_punctatus
ENSELUG00000019582	-	84	88.079	ENSTBEG00000007415	-	99	88.079	Tupaia_belangeri