EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000019784 (Gene tree)
Gene ID: 105026556
Gene Symbol: zgc:110045
Alias: -
Full Name: poly(rC)-binding protein 3-like
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 9879 bases
Position: chrLG06:1661363-1671241
Accession: 105026556
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000020558	KH_1	PF00013.29	3.2e-53	1	3
ENSELUP00000020558	KH_1	PF00013.29	3.2e-53	2	3
ENSELUP00000020558	KH_1	PF00013.29	3.2e-53	3	3
ENSELUP00000020539	KH_1	PF00013.29	4.8e-52	1	3
ENSELUP00000020539	KH_1	PF00013.29	4.8e-52	2	3
ENSELUP00000020539	KH_1	PF00013.29	4.8e-52	3	3
ENSELUP00000020558	KH_2	PF07650.17	5.6e-14	1	1
ENSELUP00000020539	KH_2	PF07650.17	7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000031003	-	1143	-	ENSELUP00000020539	380 (aa)	-	-
ENSELUT00000031022	-	2589	XM_010898083	ENSELUP00000020558	435 (aa)	XP_010896385	UPI00057794B7

Gene Model

Click here to download ENSELUG00000019784's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000019784's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000019784	zgc:110045	73	30.147	ENSELUG00000014974	igf2bp1	60	30.147
ENSELUG00000019784	zgc:110045	52	38.272	ENSELUG00000017375	nova1	85	30.159
ENSELUG00000019784	zgc:110045	61	41.667	ENSELUG00000002820	hnrnpk	59	40.909
ENSELUG00000019784	zgc:110045	67	40.625	ENSELUG00000004017	hnrpkl	65	40.000
ENSELUG00000019784	zgc:110045	76	30.573	ENSELUG00000005947	igf2bp3	64	30.573
ENSELUG00000019784	zgc:110045	71	73.633	ENSELUG00000001560	-	94	65.588
ENSELUG00000019784	zgc:110045	68	36.957	ENSELUG00000010676	igf2bp2a	65	36.957
ENSELUG00000019784	zgc:110045	72	69.470	ENSELUG00000014427	pcbp2	97	69.470
ENSELUG00000019784	zgc:110045	72	41.667	ENSELUG00000008445	-	58	37.681
ENSELUG00000019784	zgc:110045	100	56.652	ENSELUG00000001870	-	98	56.652
ENSELUG00000019784	zgc:110045	50	37.500	ENSELUG00000012346	-	83	35.821
ENSELUG00000019784	zgc:110045	72	70.192	ENSELUG00000010754	PCBP2	97	68.111
ENSELUG00000019784	zgc:110045	76	39.706	ENSELUG00000007990	fubp1	55	39.706
ENSELUG00000019784	zgc:110045	71	69.486	ENSELUG00000003521	pcbp3	93	69.486
ENSELUG00000019784	zgc:110045	99	56.277	ENSELUG00000018204	pcbp4	97	56.926

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000019784	zgc:110045	72	75.556	ENSG00000183570	PCBP3	97	67.614	Homo_sapiens
ENSELUG00000019784	zgc:110045	73	89.308	ENSAPOG00000023735	zgc:110045	97	89.308	Acanthochromis_polyacanthus
ENSELUG00000019784	zgc:110045	93	69.048	ENSACIG00000002577	zgc:110045	99	81.735	Amphilophus_citrinellus
ENSELUG00000019784	zgc:110045	100	85.355	ENSAPEG00000000729	zgc:110045	100	85.355	Amphiprion_percula
ENSELUG00000019784	zgc:110045	97	80.172	ENSATEG00000011191	zgc:110045	100	80.172	Anabas_testudineus
ENSELUG00000019784	zgc:110045	100	84.668	ENSACLG00000019285	zgc:110045	100	85.355	Astatotilapia_calliptera
ENSELUG00000019784	zgc:110045	76	83.889	ENSBTAG00000030775	PCBP3	97	67.614	Bos_taurus
ENSELUG00000019784	zgc:110045	72	71.257	ENSCAFG00000011907	PCBP3	88	71.257	Canis_familiaris
ENSELUG00000019784	zgc:110045	72	68.657	ENSCHIG00000015841	PCBP3	87	68.657	Capra_hircus
ENSELUG00000019784	zgc:110045	60	66.960	ENSTSYG00000005254	PCBP3	95	65.306	Carlito_syrichta
ENSELUG00000019784	zgc:110045	72	54.354	ENSCAPG00000006767	PCBP3	81	54.354	Cavia_aperea
ENSELUG00000019784	zgc:110045	72	71.045	ENSCPOG00000003648	PCBP3	89	71.045	Cavia_porcellus
ENSELUG00000019784	zgc:110045	72	75.238	ENSCCAG00000024561	PCBP3	88	75.238	Cebus_capucinus
ENSELUG00000019784	zgc:110045	72	75.556	ENSCATG00000038419	PCBP3	88	75.556	Cercocebus_atys
ENSELUG00000019784	zgc:110045	72	71.045	ENSCLAG00000006667	PCBP3	88	71.045	Chinchilla_lanigera
ENSELUG00000019784	zgc:110045	72	75.556	ENSCANG00000026757	PCBP3	88	75.556	Colobus_angolensis_palliatus
ENSELUG00000019784	zgc:110045	72	71.045	ENSCGRG00001006836	Pcbp3	88	71.045	Cricetulus_griseus_chok1gshd
ENSELUG00000019784	zgc:110045	72	71.045	ENSCGRG00000001837	Pcbp3	88	71.045	Cricetulus_griseus_crigri
ENSELUG00000019784	zgc:110045	100	82.110	ENSCSEG00000010020	zgc:110045	99	86.154	Cynoglossus_semilaevis
ENSELUG00000019784	zgc:110045	58	78.082	ENSCVAG00000004726	zgc:110045	99	79.091	Cyprinodon_variegatus
ENSELUG00000019784	zgc:110045	52	81.818	ENSDARG00000057141	zgc:110045	97	78.995	Danio_rerio
ENSELUG00000019784	zgc:110045	72	70.746	ENSDNOG00000049518	PCBP3	89	70.746	Dasypus_novemcinctus
ENSELUG00000019784	zgc:110045	61	66.667	ENSDORG00000003640	Pcbp3	93	67.672	Dipodomys_ordii
ENSELUG00000019784	zgc:110045	50	77.249	ENSEBUG00000009697	zgc:110045	88	79.394	Eptatretus_burgeri
ENSELUG00000019784	zgc:110045	72	75.238	ENSEASG00005007068	PCBP3	88	75.238	Equus_asinus_asinus
ENSELUG00000019784	zgc:110045	72	75.238	ENSECAG00000012413	PCBP3	88	75.238	Equus_caballus
ENSELUG00000019784	zgc:110045	72	75.238	ENSFCAG00000014812	PCBP3	88	75.238	Felis_catus
ENSELUG00000019784	zgc:110045	72	75.238	ENSFDAG00000009117	PCBP3	88	75.238	Fukomys_damarensis
ENSELUG00000019784	zgc:110045	93	65.089	ENSFHEG00000018838	-	99	78.698	Fundulus_heteroclitus
ENSELUG00000019784	zgc:110045	71	87.540	ENSGMOG00000005953	zgc:110045	95	87.540	Gadus_morhua
ENSELUG00000019784	zgc:110045	73	86.364	ENSGAFG00000017864	zgc:110045	96	86.364	Gambusia_affinis
ENSELUG00000019784	zgc:110045	59	75.000	ENSGAFG00000017860	-	100	75.000	Gambusia_affinis
ENSELUG00000019784	zgc:110045	72	87.975	ENSGACG00000003044	zgc:110045	97	87.975	Gasterosteus_aculeatus
ENSELUG00000019784	zgc:110045	72	75.556	ENSGGOG00000003683	PCBP3	88	75.556	Gorilla_gorilla
ENSELUG00000019784	zgc:110045	73	89.623	ENSHBUG00000012495	zgc:110045	97	89.623	Haplochromis_burtoni
ENSELUG00000019784	zgc:110045	72	71.045	ENSHGLG00000018620	PCBP3	89	71.045	Heterocephalus_glaber_female
ENSELUG00000019784	zgc:110045	72	71.045	ENSHGLG00100013590	PCBP3	89	71.045	Heterocephalus_glaber_male
ENSELUG00000019784	zgc:110045	74	79.094	ENSHCOG00000000818	zgc:110045	99	81.818	Hippocampus_comes
ENSELUG00000019784	zgc:110045	59	66.038	ENSIPUG00000003932	zgc:110045	97	66.038	Ictalurus_punctatus
ENSELUG00000019784	zgc:110045	72	71.045	ENSSTOG00000007178	PCBP3	88	71.045	Ictidomys_tridecemlineatus
ENSELUG00000019784	zgc:110045	72	71.045	ENSJJAG00000021192	Pcbp3	88	71.045	Jaculus_jaculus
ENSELUG00000019784	zgc:110045	97	74.928	ENSKMAG00000016179	-	93	89.474	Kryptolebias_marmoratus
ENSELUG00000019784	zgc:110045	73	82.738	ENSLBEG00000023074	zgc:110045	97	82.738	Labrus_bergylta
ENSELUG00000019784	zgc:110045	72	69.552	ENSLAFG00000020835	PCBP3	96	72.458	Loxodonta_africana
ENSELUG00000019784	zgc:110045	72	75.556	ENSMFAG00000034574	PCBP3	88	75.556	Macaca_fascicularis
ENSELUG00000019784	zgc:110045	72	75.556	ENSMMUG00000003825	PCBP3	99	69.846	Macaca_mulatta
ENSELUG00000019784	zgc:110045	72	75.556	ENSMNEG00000035551	PCBP3	97	75.556	Macaca_nemestrina
ENSELUG00000019784	zgc:110045	72	75.556	ENSMLEG00000038785	PCBP3	97	67.901	Mandrillus_leucophaeus
ENSELUG00000019784	zgc:110045	73	87.975	ENSMAMG00000014389	zgc:110045	99	87.975	Mastacembelus_armatus
ENSELUG00000019784	zgc:110045	100	84.668	ENSMZEG00005011785	zgc:110045	100	85.355	Maylandia_zebra
ENSELUG00000019784	zgc:110045	71	71.386	ENSMAUG00000007036	Pcbp3	88	71.386	Mesocricetus_auratus
ENSELUG00000019784	zgc:110045	72	75.238	ENSMICG00000012679	PCBP3	88	75.238	Microcebus_murinus
ENSELUG00000019784	zgc:110045	72	71.045	ENSMOCG00000016127	Pcbp3	88	71.045	Microtus_ochrogaster
ENSELUG00000019784	zgc:110045	89	86.559	ENSMMOG00000008399	zgc:110045	99	86.559	Mola_mola
ENSELUG00000019784	zgc:110045	52	82.323	ENSMALG00000008763	zgc:110045	97	81.188	Monopterus_albus
ENSELUG00000019784	zgc:110045	72	71.257	MGP_CAROLIEiJ_G0015475	Pcbp3	99	72.727	Mus_caroli
ENSELUG00000019784	zgc:110045	72	71.257	ENSMUSG00000001120	Pcbp3	99	72.727	Mus_musculus
ENSELUG00000019784	zgc:110045	76	69.697	MGP_PahariEiJ_G0030889	Pcbp3	99	72.727	Mus_pahari
ENSELUG00000019784	zgc:110045	76	69.697	MGP_SPRETEiJ_G0016288	Pcbp3	99	72.727	Mus_spretus
ENSELUG00000019784	zgc:110045	72	71.045	ENSMLUG00000003074	PCBP3	88	71.045	Myotis_lucifugus
ENSELUG00000019784	zgc:110045	72	71.045	ENSNGAG00000005416	Pcbp3	88	71.045	Nannospalax_galili
ENSELUG00000019784	zgc:110045	100	84.668	ENSNBRG00000017646	zgc:110045	100	85.355	Neolamprologus_brichardi
ENSELUG00000019784	zgc:110045	72	75.556	ENSNLEG00000002639	PCBP3	88	75.556	Nomascus_leucogenys
ENSELUG00000019784	zgc:110045	93	65.352	ENSMEUG00000012960	PCBP3	97	65.352	Notamacropus_eugenii
ENSELUG00000019784	zgc:110045	72	68.657	ENSODEG00000012873	PCBP3	89	68.657	Octodon_degus
ENSELUG00000019784	zgc:110045	100	82.069	ENSONIG00000010370	zgc:110045	100	82.069	Oreochromis_niloticus
ENSELUG00000019784	zgc:110045	92	71.429	ENSOANG00000006265	PCBP3	90	71.429	Ornithorhynchus_anatinus
ENSELUG00000019784	zgc:110045	100	80.549	ENSORLG00000014385	-	100	81.922	Oryzias_latipes
ENSELUG00000019784	zgc:110045	100	81.651	ENSORLG00020003139	zgc:110045	100	81.651	Oryzias_latipes_hni
ENSELUG00000019784	zgc:110045	100	81.465	ENSOMEG00000015459	-	100	82.380	Oryzias_melastigma
ENSELUG00000019784	zgc:110045	72	68.769	ENSOARG00000012704	PCBP3	88	68.769	Ovis_aries
ENSELUG00000019784	zgc:110045	72	75.556	ENSPPAG00000021940	PCBP3	88	75.556	Pan_paniscus
ENSELUG00000019784	zgc:110045	72	75.238	ENSPPRG00000003933	PCBP3	88	75.238	Panthera_pardus
ENSELUG00000019784	zgc:110045	72	61.587	ENSPTIG00000012038	PCBP3	87	62.540	Panthera_tigris_altaica
ENSELUG00000019784	zgc:110045	72	53.968	ENSPTRG00000014010	PCBP3	97	48.870	Pan_troglodytes
ENSELUG00000019784	zgc:110045	72	75.556	ENSPANG00000023631	PCBP3	88	75.556	Papio_anubis
ENSELUG00000019784	zgc:110045	100	70.455	ENSPMGG00000021588	-	99	71.493	Periophthalmus_magnuspinnatus
ENSELUG00000019784	zgc:110045	72	71.045	ENSPEMG00000000587	Pcbp3	88	71.045	Peromyscus_maniculatus_bairdii
ENSELUG00000019784	zgc:110045	64	70.492	ENSPMAG00000004719	zgc:110045	95	70.492	Petromyzon_marinus
ENSELUG00000019784	zgc:110045	77	85.629	ENSPFOG00000002348	zgc:110045	100	85.629	Poecilia_formosa
ENSELUG00000019784	zgc:110045	52	86.364	ENSPLAG00000017488	zgc:110045	96	83.182	Poecilia_latipinna
ENSELUG00000019784	zgc:110045	73	86.364	ENSPMEG00000012762	zgc:110045	96	86.364	Poecilia_mexicana
ENSELUG00000019784	zgc:110045	100	82.759	ENSPREG00000001797	zgc:110045	100	82.759	Poecilia_reticulata
ENSELUG00000019784	zgc:110045	58	68.441	ENSPPYG00000011525	-	94	68.441	Pongo_abelii
ENSELUG00000019784	zgc:110045	91	56.647	ENSPCAG00000001454	PCBP3	98	56.647	Procavia_capensis
ENSELUG00000019784	zgc:110045	72	75.238	ENSPCOG00000013797	PCBP3	88	75.238	Propithecus_coquereli
ENSELUG00000019784	zgc:110045	56	83.333	ENSPVAG00000000832	PCBP3	73	78.788	Pteropus_vampyrus
ENSELUG00000019784	zgc:110045	50	82.648	ENSPNYG00000004637	zgc:110045	99	82.648	Pundamilia_nyererei
ENSELUG00000019784	zgc:110045	50	77.626	ENSPNAG00000004501	zgc:110045	97	77.626	Pygocentrus_nattereri
ENSELUG00000019784	zgc:110045	72	75.556	ENSRROG00000034567	PCBP3	88	75.556	Rhinopithecus_roxellana
ENSELUG00000019784	zgc:110045	72	75.556	ENSSBOG00000005789	PCBP3	88	75.556	Saimiri_boliviensis_boliviensis
ENSELUG00000019784	zgc:110045	100	85.812	ENSSMAG00000013541	zgc:110045	100	85.812	Scophthalmus_maximus
ENSELUG00000019784	zgc:110045	96	83.333	ENSSDUG00000019371	zgc:110045	100	83.333	Seriola_dumerili
ENSELUG00000019784	zgc:110045	100	85.584	ENSSLDG00000021064	zgc:110045	100	85.584	Seriola_lalandi_dorsalis
ENSELUG00000019784	zgc:110045	73	89.623	ENSSPAG00000000563	zgc:110045	97	89.623	Stegastes_partitus
ENSELUG00000019784	zgc:110045	72	75.238	ENSSSCG00000023041	PCBP3	88	75.238	Sus_scrofa
ENSELUG00000019784	zgc:110045	73	86.207	ENSTRUG00000017789	zgc:110045	100	86.207	Takifugu_rubripes
ENSELUG00000019784	zgc:110045	71	82.105	ENSTNIG00000003546	zgc:110045	94	82.105	Tetraodon_nigroviridis
ENSELUG00000019784	zgc:110045	55	58.577	ENSTBEG00000011882	-	73	58.577	Tupaia_belangeri
ENSELUG00000019784	zgc:110045	76	79.444	ENSUAMG00000006491	PCBP3	96	74.101	Ursus_americanus
ENSELUG00000019784	zgc:110045	72	62.426	ENSUMAG00000025403	PCBP3	88	62.426	Ursus_maritimus
ENSELUG00000019784	zgc:110045	72	66.361	ENSVVUG00000023862	PCBP3	97	62.462	Vulpes_vulpes
ENSELUG00000019784	zgc:110045	100	83.028	ENSXMAG00000008030	zgc:110045	100	83.028	Xiphophorus_maculatus