EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000019812 (Gene tree)
Gene ID: 105022739
Gene Symbol: pop4
Alias: zgc:110597
Full Name: POP4 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 8312 bases
Position: chrLG02:5935720-5944031
Accession: 105022739
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000039609	UPF0086	PF01868.16	1.1e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000041506	-	4940	XM_010891418	ENSELUP00000039609	219 (aa)	XP_010889720	UPI000576916E

Gene Model

Click here to download ENSELUG00000019812's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03008	Ribosome biogenesis in eukaryotes	KEGG
els03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000019812's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000019812	pop4	89	64.286	ENSG00000105171	POP4	99	74.737	Homo_sapiens
ENSELUG00000019812	pop4	89	56.345	ENSAMEG00000003172	-	89	56.345	Ailuropoda_melanoleuca
ENSELUG00000019812	pop4	89	63.265	ENSAMEG00000018329	-	89	63.265	Ailuropoda_melanoleuca
ENSELUG00000019812	pop4	99	66.210	ENSACIG00000008358	pop4	99	65.753	Amphilophus_citrinellus
ENSELUG00000019812	pop4	90	69.652	ENSAOCG00000010116	pop4	98	68.657	Amphiprion_ocellaris
ENSELUG00000019812	pop4	99	66.516	ENSAPEG00000002829	pop4	93	65.611	Amphiprion_percula
ENSELUG00000019812	pop4	100	66.216	ENSATEG00000013028	pop4	100	65.766	Anabas_testudineus
ENSELUG00000019812	pop4	90	62.312	ENSAPLG00000014051	POP4	96	62.312	Anas_platyrhynchos
ENSELUG00000019812	pop4	89	65.816	ENSANAG00000020295	POP4	89	65.816	Aotus_nancymaae
ENSELUG00000019812	pop4	99	68.037	ENSACLG00000000526	pop4	99	68.037	Astatotilapia_calliptera
ENSELUG00000019812	pop4	97	73.364	ENSAMXG00000002899	pop4	97	72.897	Astyanax_mexicanus
ENSELUG00000019812	pop4	93	63.725	ENSBTAG00000002223	POP4	93	63.725	Bos_taurus
ENSELUG00000019812	pop4	89	64.975	ENSCJAG00000046750	POP4	93	71.429	Callithrix_jacchus
ENSELUG00000019812	pop4	83	62.637	ENSCAFG00000007630	POP4	100	63.736	Canis_familiaris
ENSELUG00000019812	pop4	89	65.816	ENSCHIG00000016743	POP4	89	65.816	Capra_hircus
ENSELUG00000019812	pop4	93	61.765	ENSTSYG00000003488	POP4	93	62.745	Carlito_syrichta
ENSELUG00000019812	pop4	89	48.469	ENSCAPG00000011105	POP4	88	48.469	Cavia_aperea
ENSELUG00000019812	pop4	89	65.816	ENSCPOG00000002992	POP4	89	65.816	Cavia_porcellus
ENSELUG00000019812	pop4	87	59.375	ENSCCAG00000034244	-	88	59.375	Cebus_capucinus
ENSELUG00000019812	pop4	89	62.755	ENSCCAG00000020285	-	89	64.796	Cebus_capucinus
ENSELUG00000019812	pop4	89	65.816	ENSCATG00000036022	POP4	99	75.789	Cercocebus_atys
ENSELUG00000019812	pop4	89	63.776	ENSCLAG00000013162	POP4	89	65.306	Chinchilla_lanigera
ENSELUG00000019812	pop4	89	65.816	ENSCSAG00000004868	POP4	90	65.816	Chlorocebus_sabaeus
ENSELUG00000019812	pop4	89	46.429	ENSCHOG00000002071	POP4	89	46.907	Choloepus_hoffmanni
ENSELUG00000019812	pop4	100	61.364	ENSCPBG00000016132	POP4	100	61.364	Chrysemys_picta_bellii
ENSELUG00000019812	pop4	84	32.258	ENSCING00000023871	-	93	33.862	Ciona_intestinalis
ENSELUG00000019812	pop4	89	65.816	ENSCANG00000005924	POP4	97	65.816	Colobus_angolensis_palliatus
ENSELUG00000019812	pop4	88	63.731	ENSCGRG00001017185	Pop4	88	63.731	Cricetulus_griseus_chok1gshd
ENSELUG00000019812	pop4	88	63.731	ENSCGRG00000008155	Pop4	88	63.731	Cricetulus_griseus_crigri
ENSELUG00000019812	pop4	99	59.817	ENSCSEG00000002946	pop4	99	59.817	Cynoglossus_semilaevis
ENSELUG00000019812	pop4	100	49.776	ENSCVAG00000018602	POP4	98	48.879	Cyprinodon_variegatus
ENSELUG00000019812	pop4	100	71.689	ENSDARG00000101472	pop4	100	71.689	Danio_rerio
ENSELUG00000019812	pop4	89	63.265	ENSDNOG00000047663	POP4	79	64.796	Dasypus_novemcinctus
ENSELUG00000019812	pop4	68	56.954	ENSDORG00000008577	Pop4	88	58.278	Dipodomys_ordii
ENSELUG00000019812	pop4	67	33.117	FBgn0035831	CG8038	71	32.877	Drosophila_melanogaster
ENSELUG00000019812	pop4	93	49.020	ENSETEG00000003607	POP4	94	50.490	Echinops_telfairi
ENSELUG00000019812	pop4	90	40.284	ENSEBUG00000004305	pop4	92	39.336	Eptatretus_burgeri
ENSELUG00000019812	pop4	95	41.905	ENSEBUG00000008575	pop4	93	41.905	Eptatretus_burgeri
ENSELUG00000019812	pop4	95	42.667	ENSEBUG00000010447	pop4	88	42.667	Eptatretus_burgeri
ENSELUG00000019812	pop4	93	78.846	ENSECAG00000020206	POP4	76	78.846	Equus_caballus
ENSELUG00000019812	pop4	89	45.918	ENSEEUG00000013109	POP4	98	47.449	Erinaceus_europaeus
ENSELUG00000019812	pop4	89	63.776	ENSFCAG00000001619	POP4	89	65.306	Felis_catus
ENSELUG00000019812	pop4	98	58.796	ENSFALG00000000206	POP4	96	58.796	Ficedula_albicollis
ENSELUG00000019812	pop4	89	65.306	ENSFDAG00000017859	POP4	89	66.837	Fukomys_damarensis
ENSELUG00000019812	pop4	96	61.395	ENSFHEG00000012745	pop4	97	60.465	Fundulus_heteroclitus
ENSELUG00000019812	pop4	87	66.321	ENSGMOG00000000335	pop4	95	66.321	Gadus_morhua
ENSELUG00000019812	pop4	100	57.273	ENSGALG00000041972	POP4	92	57.273	Gallus_gallus
ENSELUG00000019812	pop4	79	54.237	ENSGAFG00000003571	pop4	98	53.672	Gambusia_affinis
ENSELUG00000019812	pop4	99	67.421	ENSGACG00000014510	pop4	94	76.301	Gasterosteus_aculeatus
ENSELUG00000019812	pop4	100	59.545	ENSGAGG00000024544	POP4	79	60.909	Gopherus_agassizii
ENSELUG00000019812	pop4	89	64.796	ENSGGOG00000038346	POP4	89	64.796	Gorilla_gorilla
ENSELUG00000019812	pop4	99	67.123	ENSHBUG00000021821	pop4	99	67.123	Haplochromis_burtoni
ENSELUG00000019812	pop4	89	63.776	ENSHGLG00000015798	POP4	89	65.306	Heterocephalus_glaber_female
ENSELUG00000019812	pop4	89	63.776	ENSHGLG00100009737	POP4	89	65.306	Heterocephalus_glaber_male
ENSELUG00000019812	pop4	99	62.100	ENSHCOG00000020937	pop4	99	62.100	Hippocampus_comes
ENSELUG00000019812	pop4	100	65.000	ENSIPUG00000013652	pop4	100	65.000	Ictalurus_punctatus
ENSELUG00000019812	pop4	92	62.871	ENSSTOG00000011016	POP4	92	64.356	Ictidomys_tridecemlineatus
ENSELUG00000019812	pop4	100	57.727	ENSJJAG00000013376	Pop4	100	58.636	Jaculus_jaculus
ENSELUG00000019812	pop4	99	66.968	ENSKMAG00000012250	pop4	99	66.516	Kryptolebias_marmoratus
ENSELUG00000019812	pop4	99	61.538	ENSLBEG00000014139	pop4	99	61.991	Labrus_bergylta
ENSELUG00000019812	pop4	99	61.538	ENSLBEG00000018846	-	99	61.991	Labrus_bergylta
ENSELUG00000019812	pop4	97	61.215	ENSLACG00000008581	POP4	96	60.280	Latimeria_chalumnae
ENSELUG00000019812	pop4	100	68.182	ENSLOCG00000005597	pop4	100	68.636	Lepisosteus_oculatus
ENSELUG00000019812	pop4	89	68.367	ENSLAFG00000000084	POP4	89	68.367	Loxodonta_africana
ENSELUG00000019812	pop4	89	65.816	ENSMFAG00000029606	POP4	89	65.816	Macaca_fascicularis
ENSELUG00000019812	pop4	89	63.959	ENSMMUG00000017424	POP4	89	63.959	Macaca_mulatta
ENSELUG00000019812	pop4	89	64.467	ENSMNEG00000031374	POP4	89	64.467	Macaca_nemestrina
ENSELUG00000019812	pop4	89	63.265	ENSMLEG00000043454	POP4	89	64.796	Mandrillus_leucophaeus
ENSELUG00000019812	pop4	99	69.231	ENSMAMG00000011716	pop4	99	68.778	Mastacembelus_armatus
ENSELUG00000019812	pop4	99	68.037	ENSMZEG00005002360	pop4	99	68.037	Maylandia_zebra
ENSELUG00000019812	pop4	99	56.881	ENSMGAG00000005337	POP4	97	57.339	Meleagris_gallopavo
ENSELUG00000019812	pop4	88	65.464	ENSMAUG00000020110	Pop4	88	65.464	Mesocricetus_auratus
ENSELUG00000019812	pop4	93	58.824	ENSMICG00000035730	POP4	91	60.784	Microcebus_murinus
ENSELUG00000019812	pop4	99	67.890	ENSMMOG00000015321	pop4	99	67.890	Mola_mola
ENSELUG00000019812	pop4	93	61.765	ENSMODG00000029406	POP4	88	62.745	Monodelphis_domestica
ENSELUG00000019812	pop4	99	68.493	ENSMALG00000012571	pop4	99	69.406	Monopterus_albus
ENSELUG00000019812	pop4	88	64.103	MGP_CAROLIEiJ_G0029600	Pop4	88	63.590	Mus_caroli
ENSELUG00000019812	pop4	88	64.615	ENSMUSG00000030423	Pop4	88	63.077	Mus_musculus
ENSELUG00000019812	pop4	88	64.767	MGP_SPRETEiJ_G0030699	Pop4	88	64.767	Mus_spretus
ENSELUG00000019812	pop4	89	54.082	ENSMPUG00000008063	-	89	54.082	Mustela_putorius_furo
ENSELUG00000019812	pop4	89	62.245	ENSMPUG00000008041	-	89	63.776	Mustela_putorius_furo
ENSELUG00000019812	pop4	93	47.317	ENSMLUG00000010774	POP4	93	47.317	Myotis_lucifugus
ENSELUG00000019812	pop4	57	71.200	ENSMEUG00000003636	-	100	71.200	Notamacropus_eugenii
ENSELUG00000019812	pop4	89	65.816	ENSOPRG00000004736	POP4	98	65.816	Ochotona_princeps
ENSELUG00000019812	pop4	89	63.776	ENSODEG00000013025	POP4	92	65.306	Octodon_degus
ENSELUG00000019812	pop4	99	68.950	ENSONIG00000003458	pop4	97	68.950	Oreochromis_niloticus
ENSELUG00000019812	pop4	89	65.816	ENSOCUG00000015974	POP4	89	65.816	Oryctolagus_cuniculus
ENSELUG00000019812	pop4	99	61.991	ENSORLG00000020317	pop4	99	61.086	Oryzias_latipes
ENSELUG00000019812	pop4	99	61.991	ENSORLG00015011624	pop4	99	61.086	Oryzias_latipes_hsok
ENSELUG00000019812	pop4	99	62.896	ENSOMEG00000002538	pop4	99	61.991	Oryzias_melastigma
ENSELUG00000019812	pop4	93	62.255	ENSOGAG00000011168	POP4	93	64.216	Otolemur_garnettii
ENSELUG00000019812	pop4	89	65.816	ENSOARG00000004041	POP4	89	65.816	Ovis_aries
ENSELUG00000019812	pop4	89	64.796	ENSPPAG00000040372	POP4	89	64.796	Pan_paniscus
ENSELUG00000019812	pop4	89	63.776	ENSPPRG00000010502	POP4	89	65.306	Panthera_pardus
ENSELUG00000019812	pop4	89	63.776	ENSPTIG00000016598	POP4	89	65.306	Panthera_tigris_altaica
ENSELUG00000019812	pop4	89	64.796	ENSPTRG00000010779	POP4	89	64.796	Pan_troglodytes
ENSELUG00000019812	pop4	89	65.816	ENSPANG00000008546	POP4	89	65.816	Papio_anubis
ENSELUG00000019812	pop4	91	70.792	ENSPKIG00000004468	pop4	89	70.792	Paramormyrops_kingsleyae
ENSELUG00000019812	pop4	100	60.909	ENSPSIG00000015690	POP4	99	65.829	Pelodiscus_sinensis
ENSELUG00000019812	pop4	90	58.824	ENSPMGG00000008608	pop4	98	58.824	Periophthalmus_magnuspinnatus
ENSELUG00000019812	pop4	97	61.502	ENSPEMG00000014034	-	95	61.502	Peromyscus_maniculatus_bairdii
ENSELUG00000019812	pop4	88	56.186	ENSPEMG00000019982	-	87	56.186	Peromyscus_maniculatus_bairdii
ENSELUG00000019812	pop4	66	62.759	ENSPMAG00000006265	pop4	73	62.759	Petromyzon_marinus
ENSELUG00000019812	pop4	100	60.909	ENSPCIG00000024738	POP4	95	60.909	Phascolarctos_cinereus
ENSELUG00000019812	pop4	99	60.455	ENSPFOG00000000925	pop4	99	59.545	Poecilia_formosa
ENSELUG00000019812	pop4	99	60.909	ENSPLAG00000003161	pop4	99	60.000	Poecilia_latipinna
ENSELUG00000019812	pop4	99	60.455	ENSPMEG00000002475	pop4	99	59.545	Poecilia_mexicana
ENSELUG00000019812	pop4	99	60.455	ENSPREG00000022403	pop4	93	59.545	Poecilia_reticulata
ENSELUG00000019812	pop4	89	65.306	ENSPPYG00000009805	POP4	89	65.306	Pongo_abelii
ENSELUG00000019812	pop4	89	63.077	ENSPCAG00000007737	POP4	89	63.077	Procavia_capensis
ENSELUG00000019812	pop4	93	61.765	ENSPCOG00000018055	POP4	93	63.235	Propithecus_coquereli
ENSELUG00000019812	pop4	93	61.765	ENSPVAG00000006069	POP4	93	61.765	Pteropus_vampyrus
ENSELUG00000019812	pop4	99	67.580	ENSPNYG00000020038	pop4	99	67.580	Pundamilia_nyererei
ENSELUG00000019812	pop4	100	68.636	ENSPNAG00000005591	pop4	100	68.182	Pygocentrus_nattereri
ENSELUG00000019812	pop4	88	64.103	ENSRNOG00000027646	Pop4	88	64.103	Rattus_norvegicus
ENSELUG00000019812	pop4	69	60.131	ENSRBIG00000044769	POP4	89	61.594	Rhinopithecus_bieti
ENSELUG00000019812	pop4	89	65.816	ENSRROG00000028903	POP4	89	65.816	Rhinopithecus_roxellana
ENSELUG00000019812	pop4	71	30.952	YBR257W	-	50	33.813	Saccharomyces_cerevisiae
ENSELUG00000019812	pop4	95	60.731	ENSSBOG00000032445	POP4	99	60.731	Saimiri_boliviensis_boliviensis
ENSELUG00000019812	pop4	99	59.633	ENSSHAG00000016888	POP4	99	59.633	Sarcophilus_harrisii
ENSELUG00000019812	pop4	99	70.370	ENSSFOG00015014556	pop4	97	70.370	Scleropages_formosus
ENSELUG00000019812	pop4	99	66.516	ENSSMAG00000016611	pop4	99	66.063	Scophthalmus_maximus
ENSELUG00000019812	pop4	99	65.158	ENSSDUG00000019865	pop4	89	64.706	Seriola_dumerili
ENSELUG00000019812	pop4	99	65.158	ENSSLDG00000001763	pop4	99	65.158	Seriola_lalandi_dorsalis
ENSELUG00000019812	pop4	93	63.725	ENSSARG00000004748	POP4	94	64.706	Sorex_araneus
ENSELUG00000019812	pop4	99	70.588	ENSSPAG00000014364	pop4	99	69.683	Stegastes_partitus
ENSELUG00000019812	pop4	89	65.816	ENSSSCG00000002854	POP4	89	65.816	Sus_scrofa
ENSELUG00000019812	pop4	90	61.809	ENSTGUG00000008953	POP4	99	61.809	Taeniopygia_guttata
ENSELUG00000019812	pop4	91	67.662	ENSTNIG00000006401	pop4	99	67.662	Tetraodon_nigroviridis
ENSELUG00000019812	pop4	88	65.128	ENSTBEG00000002194	POP4	89	66.327	Tupaia_belangeri
ENSELUG00000019812	pop4	89	64.796	ENSTTRG00000005882	POP4	89	64.796	Tursiops_truncatus
ENSELUG00000019812	pop4	89	62.245	ENSUAMG00000003049	-	89	63.776	Ursus_americanus
ENSELUG00000019812	pop4	89	62.245	ENSUMAG00000007522	-	89	63.776	Ursus_maritimus
ENSELUG00000019812	pop4	89	62.755	ENSVVUG00000016876	-	69	62.755	Vulpes_vulpes
ENSELUG00000019812	pop4	96	59.716	ENSXETG00000017598	pop4	96	59.716	Xenopus_tropicalis
ENSELUG00000019812	pop4	99	59.910	ENSXCOG00000017695	pop4	93	59.459	Xiphophorus_couchianus
ENSELUG00000019812	pop4	99	59.910	ENSXMAG00000013862	pop4	93	59.459	Xiphophorus_maculatus