EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000019920 (Gene tree)
Gene ID: 105013209
Gene Symbol: gpatch8
Alias: fa12a04|fb30h12|gpatc8|wu:fa12a04|wu:fb30h12|wu:fj32a09
Full Name: G-patch domain containing 8
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 43762 bases
Position: chrLG11:11441461-11485222
Accession: 105013209
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000020743	zf-C2H2_jaz	PF12171.8	3.8e-06	1	1
ENSELUP00000020752	zf-C2H2_jaz	PF12171.8	3.8e-06	1	1
ENSELUP00000020760	zf-C2H2_jaz	PF12171.8	3.8e-06	1	1
ENSELUP00000039693	zf-C2H2_jaz	PF12171.8	4e-06	1	1
ENSELUP00000020763	zf-C2H2_jaz	PF12171.8	4e-06	1	1
ENSELUP00000020763	G-patch	PF01585.23	1.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000031258	-	4455	XM_010874569	ENSELUP00000020743	1439 (aa)	XP_010872871	UPI00057760E2
ENSELUT00000031268	-	4536	XM_020050948	ENSELUP00000039693	1511 (aa)	XP_019906507	UPI0009732F29
ENSELUT00000031283	-	4451	-	ENSELUP00000020760	1455 (aa)	-	UPI0005765C51
ENSELUT00000041564	-	4763	XM_010874565	ENSELUP00000020763	1518 (aa)	XP_010872867	UPI00057634B0
ENSELUT00000041554	-	4468	-	ENSELUP00000020752	1439 (aa)	-	UPI00057760E2

Gene Model

Click here to download ENSELUG00000019920's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000019920's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000019920	gpatch8	57	66.325	ENSAPOG00000023938	gpatch8	61	66.147	Acanthochromis_polyacanthus
ENSELUG00000019920	gpatch8	57	65.148	ENSACIG00000012241	gpatch8	96	63.679	Amphilophus_citrinellus
ENSELUG00000019920	gpatch8	57	66.553	ENSAOCG00000018102	gpatch8	61	66.597	Amphiprion_ocellaris
ENSELUG00000019920	gpatch8	57	66.553	ENSAPEG00000016776	gpatch8	61	66.563	Amphiprion_percula
ENSELUG00000019920	gpatch8	57	64.786	ENSATEG00000003247	gpatch8	56	63.543	Anabas_testudineus
ENSELUG00000019920	gpatch8	57	64.432	ENSACLG00000004165	gpatch8	100	64.827	Astatotilapia_calliptera
ENSELUG00000019920	gpatch8	60	58.811	ENSAMXG00000041683	gpatch8	57	59.276	Astyanax_mexicanus
ENSELUG00000019920	gpatch8	56	61.442	ENSCSEG00000021277	gpatch8	61	61.740	Cynoglossus_semilaevis
ENSELUG00000019920	gpatch8	57	64.073	ENSCVAG00000013477	gpatch8	61	63.627	Cyprinodon_variegatus
ENSELUG00000019920	gpatch8	100	61.661	ENSDARG00000059768	gpatch8	96	58.694	Danio_rerio
ENSELUG00000019920	gpatch8	57	62.414	ENSFHEG00000005791	gpatch8	100	63.318	Fundulus_heteroclitus
ENSELUG00000019920	gpatch8	56	62.903	ENSGAFG00000018138	gpatch8	61	63.351	Gambusia_affinis
ENSELUG00000019920	gpatch8	57	64.416	ENSHBUG00000002669	gpatch8	100	64.884	Haplochromis_burtoni
ENSELUG00000019920	gpatch8	75	54.673	ENSHGLG00100010738	GPATCH8	65	58.537	Heterocephalus_glaber_male
ENSELUG00000019920	gpatch8	62	60.441	ENSHCOG00000017518	gpatch8	61	58.910	Hippocampus_comes
ENSELUG00000019920	gpatch8	60	59.957	ENSIPUG00000015431	gpatch8	55	58.025	Ictalurus_punctatus
ENSELUG00000019920	gpatch8	57	63.254	ENSKMAG00000018364	gpatch8	100	65.237	Kryptolebias_marmoratus
ENSELUG00000019920	gpatch8	57	65.114	ENSLBEG00000023352	gpatch8	61	64.382	Labrus_bergylta
ENSELUG00000019920	gpatch8	63	71.831	ENSLOCG00000012265	gpatch8	70	73.485	Lepisosteus_oculatus
ENSELUG00000019920	gpatch8	57	64.005	ENSMAMG00000001618	gpatch8	60	64.625	Mastacembelus_armatus
ENSELUG00000019920	gpatch8	57	64.188	ENSMZEG00005022584	gpatch8	100	64.827	Maylandia_zebra
ENSELUG00000019920	gpatch8	57	65.341	ENSMMOG00000020472	gpatch8	61	65.798	Mola_mola
ENSELUG00000019920	gpatch8	57	64.760	ENSMALG00000004204	gpatch8	95	64.566	Monopterus_albus
ENSELUG00000019920	gpatch8	50	59.538	ENSMLUG00000013840	GPATCH8	51	62.581	Myotis_lucifugus
ENSELUG00000019920	gpatch8	57	64.082	ENSNBRG00000016402	gpatch8	100	64.702	Neolamprologus_brichardi
ENSELUG00000019920	gpatch8	57	62.976	ENSONIG00000001292	gpatch8	100	63.245	Oreochromis_niloticus
ENSELUG00000019920	gpatch8	57	62.002	ENSORLG00000028497	gpatch8	100	63.421	Oryzias_latipes
ENSELUG00000019920	gpatch8	58	61.963	ENSORLG00020006656	gpatch8	100	61.590	Oryzias_latipes_hni
ENSELUG00000019920	gpatch8	57	62.002	ENSORLG00015019797	gpatch8	100	63.485	Oryzias_latipes_hsok
ENSELUG00000019920	gpatch8	57	62.171	ENSOMEG00000023809	gpatch8	100	63.817	Oryzias_melastigma
ENSELUG00000019920	gpatch8	57	55.747	ENSPKIG00000004860	GPATCH8	50	54.254	Paramormyrops_kingsleyae
ENSELUG00000019920	gpatch8	62	54.006	ENSPKIG00000018753	gpatch8	52	56.463	Paramormyrops_kingsleyae
ENSELUG00000019920	gpatch8	100	63.846	ENSPMGG00000000730	gpatch8	60	61.795	Periophthalmus_magnuspinnatus
ENSELUG00000019920	gpatch8	56	63.188	ENSPFOG00000014833	gpatch8	61	63.316	Poecilia_formosa
ENSELUG00000019920	gpatch8	56	63.073	ENSPLAG00000001035	gpatch8	61	63.212	Poecilia_latipinna
ENSELUG00000019920	gpatch8	56	63.073	ENSPMEG00000024032	gpatch8	61	63.420	Poecilia_mexicana
ENSELUG00000019920	gpatch8	56	62.900	ENSPREG00000008911	gpatch8	100	61.962	Poecilia_reticulata
ENSELUG00000019920	gpatch8	57	64.432	ENSPNYG00000009426	gpatch8	100	64.827	Pundamilia_nyererei
ENSELUG00000019920	gpatch8	58	62.013	ENSPNAG00000016200	gpatch8	58	62.180	Pygocentrus_nattereri
ENSELUG00000019920	gpatch8	56	54.514	ENSSFOG00015021377	-	51	55.597	Scleropages_formosus
ENSELUG00000019920	gpatch8	57	56.335	ENSSFOG00015004299	GPATCH8	51	56.501	Scleropages_formosus
ENSELUG00000019920	gpatch8	55	63.492	ENSSDUG00000018065	gpatch8	59	63.728	Seriola_dumerili
ENSELUG00000019920	gpatch8	57	66.100	ENSSLDG00000009225	gpatch8	61	65.907	Seriola_lalandi_dorsalis
ENSELUG00000019920	gpatch8	57	65.232	ENSSPAG00000011368	gpatch8	95	64.551	Stegastes_partitus
ENSELUG00000019920	gpatch8	57	61.098	ENSTRUG00000020474	gpatch8	56	60.665	Takifugu_rubripes
ENSELUG00000019920	gpatch8	60	56.320	ENSTBEG00000009486	GPATCH8	57	55.962	Tupaia_belangeri
ENSELUG00000019920	gpatch8	56	62.743	ENSXCOG00000016680	gpatch8	61	62.913	Xiphophorus_couchianus
ENSELUG00000019920	gpatch8	56	62.929	ENSXMAG00000009217	gpatch8	61	63.495	Xiphophorus_maculatus