EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000019953 (Gene tree)
Gene ID: 105007529
Gene Symbol: -
Alias: -
Full Name: AF4/FMR2 family member 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 72067 bases
Position: chrAZJR03001199.1:26671-98737
Accession: 105007529
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000020797	AF-4	PF05110.13	0	1	2
ENSELUP00000020797	AF-4	PF05110.13	0	2	2
ENSELUP00000039710	AF-4	PF05110.13	1.9e-227	1	3
ENSELUP00000039710	AF-4	PF05110.13	1.9e-227	2	3
ENSELUP00000039710	AF-4	PF05110.13	1.9e-227	3	3
ENSELUP00000039707	AF-4	PF05110.13	2.3e-199	1	2
ENSELUP00000039707	AF-4	PF05110.13	2.3e-199	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000031310	-	7950	XM_010866495	ENSELUP00000020797	1178 (aa)	XP_010864797	UPI000661DB1B
ENSELUT00000031272	-	2653	-	ENSELUP00000039707	833 (aa)	-	-
ENSELUT00000031295	-	2737	-	ENSELUP00000039710	899 (aa)	-	-

Gene Model

Click here to download ENSELUG00000019953's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000019953's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000019953	-	77	54.167	ENSELUG00000023871	aff4	80	59.016

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000019953	-	94	51.667	ENSAPOG00000002994	-	99	44.381	Acanthochromis_polyacanthus
ENSELUG00000019953	-	54	54.762	ENSAMEG00000017764	AFF4	56	31.114	Ailuropoda_melanoleuca
ENSELUG00000019953	-	65	46.907	ENSACIG00000021066	-	68	62.791	Amphilophus_citrinellus
ENSELUG00000019953	-	94	55.932	ENSAOCG00000020283	-	99	44.881	Amphiprion_ocellaris
ENSELUG00000019953	-	94	54.237	ENSAPEG00000018794	-	99	45.000	Amphiprion_percula
ENSELUG00000019953	-	100	45.491	ENSATEG00000015552	-	99	45.085	Anabas_testudineus
ENSELUG00000019953	-	94	43.750	ENSAPLG00000004059	AFF1	76	43.750	Anas_platyrhynchos
ENSELUG00000019953	-	83	53.333	ENSACAG00000012192	AFF1	73	53.333	Anolis_carolinensis
ENSELUG00000019953	-	99	42.023	ENSACLG00000002905	-	99	41.736	Astatotilapia_calliptera
ENSELUG00000019953	-	50	83.333	ENSAMXG00000015641	-	73	57.466	Astyanax_mexicanus
ENSELUG00000019953	-	65	35.541	ENSBTAG00000009482	AFF4	59	30.769	Bos_taurus
ENSELUG00000019953	-	54	33.921	ENSCAFG00020000956	AFF4	69	30.461	Canis_lupus_dingo
ENSELUG00000019953	-	65	35.541	ENSCHIG00000015153	AFF4	59	30.748	Capra_hircus
ENSELUG00000019953	-	50	54.762	ENSTSYG00000014713	AFF4	61	54.762	Carlito_syrichta
ENSELUG00000019953	-	56	54.762	ENSCSAG00000013682	AFF4	59	30.506	Chlorocebus_sabaeus
ENSELUG00000019953	-	57	82.500	ENSCSAG00000004333	AFF1	89	80.597	Chlorocebus_sabaeus
ENSELUG00000019953	-	74	82.500	ENSCHOG00000000041	AFF1	50	80.597	Choloepus_hoffmanni
ENSELUG00000019953	-	69	48.889	ENSCPBG00000020831	AFF2	55	44.689	Chrysemys_picta_bellii
ENSELUG00000019953	-	56	82.500	ENSCANG00000037514	AFF1	89	80.597	Colobus_angolensis_palliatus
ENSELUG00000019953	-	53	77.500	ENSCGRG00001015769	Aff1	72	77.500	Cricetulus_griseus_chok1gshd
ENSELUG00000019953	-	52	39.421	ENSCGRG00000004837	Aff1	99	33.880	Cricetulus_griseus_crigri
ENSELUG00000019953	-	91	50.909	ENSCSEG00000017002	aff4	83	33.165	Cynoglossus_semilaevis
ENSELUG00000019953	-	98	39.012	ENSCVAG00000015626	-	99	38.551	Cyprinodon_variegatus
ENSELUG00000019953	-	55	48.387	ENSCVAG00000005218	aff4	61	48.387	Cyprinodon_variegatus
ENSELUG00000019953	-	53	35.590	ENSDARG00000001857	aff4	73	31.257	Danio_rerio
ENSELUG00000019953	-	54	54.762	ENSDNOG00000016669	AFF4	60	54.762	Dasypus_novemcinctus
ENSELUG00000019953	-	69	85.000	ENSETEG00000014905	AFF1	64	82.090	Echinops_telfairi
ENSELUG00000019953	-	98	30.248	ENSFHEG00000004526	aff4	60	32.068	Fundulus_heteroclitus
ENSELUG00000019953	-	54	52.542	ENSFHEG00000003521	-	86	35.897	Fundulus_heteroclitus
ENSELUG00000019953	-	93	42.308	ENSGALG00000043935	AFF1	99	38.148	Gallus_gallus
ENSELUG00000019953	-	92	30.225	ENSGAFG00000005288	aff4	58	32.314	Gambusia_affinis
ENSELUG00000019953	-	78	32.473	ENSGACG00000020734	aff4	57	32.246	Gasterosteus_aculeatus
ENSELUG00000019953	-	99	40.419	ENSGACG00000016333	-	99	44.388	Gasterosteus_aculeatus
ENSELUG00000019953	-	99	41.941	ENSHBUG00000005828	-	99	41.736	Haplochromis_burtoni
ENSELUG00000019953	-	94	50.847	ENSHCOG00000000539	-	99	37.333	Hippocampus_comes
ENSELUG00000019953	-	78	32.056	ENSHCOG00000016280	aff4	61	59.524	Hippocampus_comes
ENSELUG00000019953	-	74	41.991	ENSIPUG00000015259	-	99	43.396	Ictalurus_punctatus
ENSELUG00000019953	-	51	36.322	ENSIPUG00000011689	aff4	86	57.627	Ictalurus_punctatus
ENSELUG00000019953	-	50	45.000	ENSSTOG00000012140	AFF3	60	56.923	Ictidomys_tridecemlineatus
ENSELUG00000019953	-	94	54.237	ENSKMAG00000013113	-	88	64.865	Kryptolebias_marmoratus
ENSELUG00000019953	-	94	50.847	ENSLBEG00000016928	-	99	44.020	Labrus_bergylta
ENSELUG00000019953	-	93	59.524	ENSLACG00000008849	AFF4	73	59.524	Latimeria_chalumnae
ENSELUG00000019953	-	95	72.340	ENSLACG00000007303	AFF1	71	80.000	Latimeria_chalumnae
ENSELUG00000019953	-	95	48.768	ENSLOCG00000004025	AFF1	99	49.268	Lepisosteus_oculatus
ENSELUG00000019953	-	58	49.237	ENSLOCG00000015403	aff2	60	48.855	Lepisosteus_oculatus
ENSELUG00000019953	-	53	42.857	ENSLAFG00000018691	AFF2	79	36.691	Loxodonta_africana
ENSELUG00000019953	-	94	74.359	ENSMAMG00000016189	-	71	74.359	Mastacembelus_armatus
ENSELUG00000019953	-	99	42.105	ENSMZEG00005020442	-	99	41.818	Maylandia_zebra
ENSELUG00000019953	-	94	41.584	ENSMGAG00000007646	AFF1	99	37.490	Meleagris_gallopavo
ENSELUG00000019953	-	60	65.306	ENSMAUG00000010241	Aff1	88	75.000	Mesocricetus_auratus
ENSELUG00000019953	-	58	64.815	ENSMOCG00000017389	Aff1	75	64.815	Microtus_ochrogaster
ENSELUG00000019953	-	55	59.322	ENSMMOG00000010019	aff2	71	59.322	Mola_mola
ENSELUG00000019953	-	95	68.750	ENSMODG00000020745	AFF1	69	68.750	Monodelphis_domestica
ENSELUG00000019953	-	50	59.524	ENSMODG00000013842	AFF4	59	59.524	Monodelphis_domestica
ENSELUG00000019953	-	100	44.943	ENSMALG00000002436	-	99	44.372	Monopterus_albus
ENSELUG00000019953	-	61	57.143	ENSMALG00000017690	aff4	79	33.745	Monopterus_albus
ENSELUG00000019953	-	91	77.500	MGP_CAROLIEiJ_G0027469	Aff1	73	77.500	Mus_caroli
ENSELUG00000019953	-	51	80.000	ENSMUSG00000029313	Aff1	63	80.000	Mus_musculus
ENSELUG00000019953	-	57	42.500	ENSMLUG00000010364	AFF2	50	41.429	Myotis_lucifugus
ENSELUG00000019953	-	87	38.867	ENSONIG00000007636	-	99	40.805	Oreochromis_niloticus
ENSELUG00000019953	-	81	64.815	ENSOCUG00000002105	AFF1	69	64.815	Oryctolagus_cuniculus
ENSELUG00000019953	-	80	50.000	ENSORLG00000006428	-	89	50.000	Oryzias_latipes
ENSELUG00000019953	-	94	50.000	ENSORLG00020003991	-	99	37.553	Oryzias_latipes_hni
ENSELUG00000019953	-	94	50.000	ENSORLG00015009287	-	87	50.000	Oryzias_latipes_hsok
ENSELUG00000019953	-	94	38.170	ENSOMEG00000005799	-	99	38.761	Oryzias_melastigma
ENSELUG00000019953	-	92	82.500	ENSOARG00000004522	AFF1	60	82.500	Ovis_aries
ENSELUG00000019953	-	61	37.410	ENSOARG00000013406	AFF4	59	30.769	Ovis_aries
ENSELUG00000019953	-	99	32.050	ENSPKIG00000024249	AFF4	66	49.351	Paramormyrops_kingsleyae
ENSELUG00000019953	-	83	71.138	ENSPKIG00000007777	-	90	68.163	Paramormyrops_kingsleyae
ENSELUG00000019953	-	66	82.090	ENSPSIG00000003759	AFF1	99	38.395	Pelodiscus_sinensis
ENSELUG00000019953	-	50	59.524	ENSPCIG00000000197	AFF4	60	59.524	Phascolarctos_cinereus
ENSELUG00000019953	-	99	38.957	ENSPFOG00000004581	-	99	37.391	Poecilia_formosa
ENSELUG00000019953	-	53	34.286	ENSPFOG00000007079	aff4	58	33.244	Poecilia_formosa
ENSELUG00000019953	-	51	54.762	ENSPLAG00000005101	aff2	68	43.939	Poecilia_latipinna
ENSELUG00000019953	-	95	37.704	ENSPLAG00000012910	-	99	36.569	Poecilia_latipinna
ENSELUG00000019953	-	53	34.505	ENSPLAG00000001837	aff4	58	33.378	Poecilia_latipinna
ENSELUG00000019953	-	87	36.719	ENSPMEG00000020100	-	83	36.886	Poecilia_mexicana
ENSELUG00000019953	-	53	34.505	ENSPMEG00000005613	aff4	58	33.378	Poecilia_mexicana
ENSELUG00000019953	-	53	34.505	ENSPREG00000005287	aff4	58	33.111	Poecilia_reticulata
ENSELUG00000019953	-	94	53.333	ENSPREG00000003514	-	99	38.875	Poecilia_reticulata
ENSELUG00000019953	-	57	82.500	ENSPPYG00000014910	AFF1	73	82.500	Pongo_abelii
ENSELUG00000019953	-	54	54.762	ENSPCAG00000003995	AFF4	65	55.738	Procavia_capensis
ENSELUG00000019953	-	54	57.143	ENSPCOG00000023876	AFF4	65	57.377	Propithecus_coquereli
ENSELUG00000019953	-	55	34.557	ENSRROG00000033812	AFF4	86	30.603	Rhinopithecus_roxellana
ENSELUG00000019953	-	94	77.500	ENSSHAG00000004203	AFF1	84	74.627	Sarcophilus_harrisii
ENSELUG00000019953	-	50	59.524	ENSSHAG00000013198	AFF4	61	59.524	Sarcophilus_harrisii
ENSELUG00000019953	-	50	35.814	ENSSFOG00015000846	AFF4	92	34.301	Scleropages_formosus
ENSELUG00000019953	-	80	59.524	ENSSFOG00015018646	aff4	85	59.322	Scleropages_formosus
ENSELUG00000019953	-	95	71.111	ENSSFOG00015021743	-	76	71.111	Scleropages_formosus
ENSELUG00000019953	-	99	44.604	ENSSMAG00000007062	-	99	44.569	Scophthalmus_maximus
ENSELUG00000019953	-	85	43.484	ENSSDUG00000023775	-	98	42.553	Seriola_dumerili
ENSELUG00000019953	-	94	52.113	ENSSLDG00000006836	-	99	45.455	Seriola_lalandi_dorsalis
ENSELUG00000019953	-	98	46.096	ENSSPAG00000003972	-	99	45.674	Stegastes_partitus
ENSELUG00000019953	-	82	30.791	ENSSPAG00000012370	aff4	90	32.937	Stegastes_partitus
ENSELUG00000019953	-	99	41.162	ENSTRUG00000014005	-	99	40.839	Takifugu_rubripes
ENSELUG00000019953	-	94	52.542	ENSTNIG00000007537	-	92	42.654	Tetraodon_nigroviridis
ENSELUG00000019953	-	59	85.000	ENSTTRG00000005595	AFF1	64	82.090	Tursiops_truncatus
ENSELUG00000019953	-	54	54.762	ENSUAMG00000025984	AFF4	56	31.114	Ursus_americanus
ENSELUG00000019953	-	54	33.481	ENSUMAG00000017952	AFF4	85	55.738	Ursus_maritimus
ENSELUG00000019953	-	54	34.292	ENSVVUG00000024524	AFF4	59	30.124	Vulpes_vulpes
ENSELUG00000019953	-	99	38.261	ENSXETG00000019955	aff1	61	77.500	Xenopus_tropicalis
ENSELUG00000019953	-	63	30.169	ENSXCOG00000006385	aff4	97	31.877	Xiphophorus_couchianus
ENSELUG00000019953	-	85	30.311	ENSXMAG00000001642	aff4	58	32.400	Xiphophorus_maculatus
ENSELUG00000019953	-	94	51.667	ENSXMAG00000004657	-	99	38.387	Xiphophorus_maculatus