EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000020072 (Gene tree)
Gene ID: 105011013
Gene Symbol: smfn
Alias: zgc:73191
Full Name: RNA exonuclease 2
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 21715 bases
Position: chrLG07:24273711-24295425
Accession: 105011013
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000020878	RNase_T	PF00929.24	4.4e-34	1	1
ENSELUP00000039767	RNase_T	PF00929.24	2.1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000041616	-	1719	-	ENSELUP00000039767	235 (aa)	-	-
ENSELUT00000031593	-	1881	XM_010870740	ENSELUP00000020878	289 (aa)	XP_010869042	UPI0005766240

Gene Model

Click here to download ENSELUG00000020072's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000020072's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000020072	smfn	69	79.293	ENSG00000076043	REXO2	99	78.610	Homo_sapiens
ENSELUG00000020072	smfn	69	79.293	ENSAMEG00000013263	REXO2	84	79.293	Ailuropoda_melanoleuca
ENSELUG00000020072	smfn	64	81.522	ENSACIG00000023553	smfn	99	81.522	Amphilophus_citrinellus
ENSELUG00000020072	smfn	57	81.203	ENSAOCG00000011565	smfn	99	69.939	Amphiprion_ocellaris
ENSELUG00000020072	smfn	70	81.592	ENSAPEG00000012435	smfn	74	81.592	Amphiprion_percula
ENSELUG00000020072	smfn	99	62.199	ENSATEG00000015385	smfn	99	62.199	Anabas_testudineus
ENSELUG00000020072	smfn	66	78.010	ENSAPLG00000005045	REXO2	93	78.010	Anas_platyrhynchos
ENSELUG00000020072	smfn	71	64.078	ENSACAG00000011631	REXO2	96	64.078	Anolis_carolinensis
ENSELUG00000020072	smfn	69	79.798	ENSANAG00000020834	REXO2	84	79.798	Aotus_nancymaae
ENSELUG00000020072	smfn	69	78.392	ENSACLG00000024566	smfn	96	78.689	Astatotilapia_calliptera
ENSELUG00000020072	smfn	69	79.293	ENSBTAG00000005843	REXO2	84	79.293	Bos_taurus
ENSELUG00000020072	smfn	63	46.703	WBGene00007429	C08B6.8	88	55.072	Caenorhabditis_elegans
ENSELUG00000020072	smfn	69	78.788	ENSCJAG00000012434	REXO2	84	78.788	Callithrix_jacchus
ENSELUG00000020072	smfn	69	78.283	ENSCAFG00000013511	REXO2	83	78.283	Canis_familiaris
ENSELUG00000020072	smfn	69	79.293	ENSCAFG00020002513	REXO2	84	79.293	Canis_lupus_dingo
ENSELUG00000020072	smfn	69	79.293	ENSCHIG00000009264	REXO2	84	79.293	Capra_hircus
ENSELUG00000020072	smfn	67	68.557	ENSTSYG00000027948	-	99	68.557	Carlito_syrichta
ENSELUG00000020072	smfn	71	76.699	ENSTSYG00000002237	REXO2	87	76.699	Carlito_syrichta
ENSELUG00000020072	smfn	65	78.610	ENSCAPG00000006093	REXO2	99	78.610	Cavia_aperea
ENSELUG00000020072	smfn	69	79.798	ENSCPOG00000010548	REXO2	84	79.798	Cavia_porcellus
ENSELUG00000020072	smfn	69	79.798	ENSCCAG00000034979	REXO2	84	79.798	Cebus_capucinus
ENSELUG00000020072	smfn	69	79.293	ENSCATG00000015278	REXO2	84	79.293	Cercocebus_atys
ENSELUG00000020072	smfn	69	79.798	ENSCLAG00000011195	REXO2	84	79.798	Chinchilla_lanigera
ENSELUG00000020072	smfn	69	79.293	ENSCSAG00000002754	REXO2	84	79.293	Chlorocebus_sabaeus
ENSELUG00000020072	smfn	69	78.283	ENSCHOG00000000642	-	84	78.283	Choloepus_hoffmanni
ENSELUG00000020072	smfn	57	75.940	ENSCPBG00000009359	REXO2	99	74.306	Chrysemys_picta_bellii
ENSELUG00000020072	smfn	61	61.364	ENSCING00000009858	-	85	61.364	Ciona_intestinalis
ENSELUG00000020072	smfn	69	79.293	ENSCANG00000034756	REXO2	84	79.293	Colobus_angolensis_palliatus
ENSELUG00000020072	smfn	74	74.766	ENSCGRG00001019814	-	89	74.766	Cricetulus_griseus_chok1gshd
ENSELUG00000020072	smfn	68	78.061	ENSCGRG00001013673	-	96	78.061	Cricetulus_griseus_chok1gshd
ENSELUG00000020072	smfn	69	76.768	ENSCGRG00001010922	-	97	76.768	Cricetulus_griseus_chok1gshd
ENSELUG00000020072	smfn	74	74.766	ENSCGRG00000006235	Rexo2	89	74.766	Cricetulus_griseus_crigri
ENSELUG00000020072	smfn	66	86.316	ENSCSEG00000007214	smfn	89	71.542	Cynoglossus_semilaevis
ENSELUG00000020072	smfn	63	79.121	ENSCVAG00000012008	smfn	98	79.121	Cyprinodon_variegatus
ENSELUG00000020072	smfn	88	70.079	ENSDARG00000009806	smfn	91	70.079	Danio_rerio
ENSELUG00000020072	smfn	59	84.795	ENSDNOG00000046533	REXO2	82	84.795	Dasypus_novemcinctus
ENSELUG00000020072	smfn	69	79.798	ENSDORG00000011255	Rexo2	84	79.798	Dipodomys_ordii
ENSELUG00000020072	smfn	67	62.887	ENSDORG00000025142	-	90	60.194	Dipodomys_ordii
ENSELUG00000020072	smfn	66	52.105	FBgn0039115	CG10214	89	52.105	Drosophila_melanogaster
ENSELUG00000020072	smfn	78	64.889	ENSEBUG00000013964	REXO2	76	64.889	Eptatretus_burgeri
ENSELUG00000020072	smfn	69	79.293	ENSEASG00005006674	REXO2	84	79.293	Equus_asinus_asinus
ENSELUG00000020072	smfn	69	79.293	ENSECAG00000005988	REXO2	84	79.293	Equus_caballus
ENSELUG00000020072	smfn	69	79.293	ENSFCAG00000018632	REXO2	84	79.293	Felis_catus
ENSELUG00000020072	smfn	65	77.660	ENSFALG00000010044	REXO2	93	77.660	Ficedula_albicollis
ENSELUG00000020072	smfn	69	79.798	ENSFDAG00000011764	REXO2	84	79.798	Fukomys_damarensis
ENSELUG00000020072	smfn	66	87.435	ENSGMOG00000006370	smfn	99	87.435	Gadus_morhua
ENSELUG00000020072	smfn	67	79.897	ENSGALG00000035980	REXO2	97	71.179	Gallus_gallus
ENSELUG00000020072	smfn	86	65.267	ENSGAFG00000015349	smfn	93	65.267	Gambusia_affinis
ENSELUG00000020072	smfn	65	80.851	ENSGACG00000020096	smfn	93	80.851	Gasterosteus_aculeatus
ENSELUG00000020072	smfn	71	74.272	ENSGAGG00000021126	REXO2	90	74.272	Gopherus_agassizii
ENSELUG00000020072	smfn	69	79.293	ENSGGOG00000023267	REXO2	84	79.293	Gorilla_gorilla
ENSELUG00000020072	smfn	62	74.026	ENSHBUG00000020097	REXO2	75	74.026	Haplochromis_burtoni
ENSELUG00000020072	smfn	69	79.293	ENSHGLG00000013556	REXO2	84	79.293	Heterocephalus_glaber_female
ENSELUG00000020072	smfn	69	79.798	ENSHGLG00100005257	REXO2	84	79.798	Heterocephalus_glaber_male
ENSELUG00000020072	smfn	58	80.240	ENSHCOG00000007122	smfn	94	80.240	Hippocampus_comes
ENSELUG00000020072	smfn	67	85.567	ENSIPUG00000020440	rexo2	74	84.577	Ictalurus_punctatus
ENSELUG00000020072	smfn	69	79.798	ENSSTOG00000012465	REXO2	84	79.798	Ictidomys_tridecemlineatus
ENSELUG00000020072	smfn	69	56.566	ENSJJAG00000022605	-	79	56.566	Jaculus_jaculus
ENSELUG00000020072	smfn	69	79.798	ENSJJAG00000013710	-	84	79.798	Jaculus_jaculus
ENSELUG00000020072	smfn	67	81.347	ENSKMAG00000016795	smfn	74	77.143	Kryptolebias_marmoratus
ENSELUG00000020072	smfn	64	82.609	ENSLBEG00000006021	smfn	97	82.609	Labrus_bergylta
ENSELUG00000020072	smfn	70	69.608	ENSLACG00000018623	REXO2	83	69.608	Latimeria_chalumnae
ENSELUG00000020072	smfn	71	82.353	ENSLOCG00000002389	smfn	97	82.353	Lepisosteus_oculatus
ENSELUG00000020072	smfn	69	79.293	ENSLAFG00000012451	REXO2	91	72.603	Loxodonta_africana
ENSELUG00000020072	smfn	69	79.293	ENSMFAG00000041155	REXO2	84	79.293	Macaca_fascicularis
ENSELUG00000020072	smfn	69	79.293	ENSMMUG00000012269	REXO2	84	79.293	Macaca_mulatta
ENSELUG00000020072	smfn	69	79.293	ENSMNEG00000033379	REXO2	84	79.293	Macaca_nemestrina
ENSELUG00000020072	smfn	69	79.293	ENSMLEG00000036571	REXO2	84	79.293	Mandrillus_leucophaeus
ENSELUG00000020072	smfn	94	65.568	ENSMAMG00000021209	smfn	93	65.568	Mastacembelus_armatus
ENSELUG00000020072	smfn	69	78.392	ENSMZEG00005023224	-	76	78.392	Maylandia_zebra
ENSELUG00000020072	smfn	69	78.392	ENSMZEG00005020730	REXO2	76	78.392	Maylandia_zebra
ENSELUG00000020072	smfn	56	77.444	ENSMGAG00000003026	REXO2	99	75.926	Meleagris_gallopavo
ENSELUG00000020072	smfn	74	74.766	ENSMAUG00000014576	Rexo2	89	74.766	Mesocricetus_auratus
ENSELUG00000020072	smfn	69	79.798	ENSMICG00000010094	REXO2	84	79.798	Microcebus_murinus
ENSELUG00000020072	smfn	74	74.766	ENSMOCG00000009016	Rexo2	89	74.766	Microtus_ochrogaster
ENSELUG00000020072	smfn	72	76.812	ENSMMOG00000006430	smfn	75	76.812	Mola_mola
ENSELUG00000020072	smfn	69	79.293	ENSMODG00000013913	REXO2	84	79.293	Monodelphis_domestica
ENSELUG00000020072	smfn	98	62.456	ENSMALG00000018130	smfn	80	62.456	Monopterus_albus
ENSELUG00000020072	smfn	79	69.737	MGP_CAROLIEiJ_G0032166	Rexo2	88	74.057	Mus_caroli
ENSELUG00000020072	smfn	74	73.832	ENSMUSG00000032026	Rexo2	89	73.832	Mus_musculus
ENSELUG00000020072	smfn	74	73.832	MGP_PahariEiJ_G0015034	Rexo2	89	73.832	Mus_pahari
ENSELUG00000020072	smfn	74	73.832	MGP_SPRETEiJ_G0033305	Rexo2	89	73.832	Mus_spretus
ENSELUG00000020072	smfn	69	79.293	ENSMPUG00000003947	REXO2	84	79.293	Mustela_putorius_furo
ENSELUG00000020072	smfn	69	78.788	ENSMLUG00000009030	REXO2	84	78.788	Myotis_lucifugus
ENSELUG00000020072	smfn	69	79.293	ENSNGAG00000008819	Rexo2	97	79.293	Nannospalax_galili
ENSELUG00000020072	smfn	63	79.781	ENSNBRG00000006529	smfn	96	79.781	Neolamprologus_brichardi
ENSELUG00000020072	smfn	69	79.293	ENSNLEG00000029745	REXO2	84	79.293	Nomascus_leucogenys
ENSELUG00000020072	smfn	69	78.788	ENSMEUG00000011558	REXO2	91	78.788	Notamacropus_eugenii
ENSELUG00000020072	smfn	57	76.692	ENSOPRG00000011076	REXO2	56	76.692	Ochotona_princeps
ENSELUG00000020072	smfn	65	79.144	ENSODEG00000009750	-	99	79.144	Octodon_degus
ENSELUG00000020072	smfn	60	67.442	ENSODEG00000016046	-	86	67.442	Octodon_degus
ENSELUG00000020072	smfn	69	79.899	ENSONIG00000001954	smfn	85	79.899	Oreochromis_niloticus
ENSELUG00000020072	smfn	68	78.571	ENSOANG00000001754	REXO2	83	77.778	Ornithorhynchus_anatinus
ENSELUG00000020072	smfn	69	79.293	ENSOCUG00000004274	REXO2	79	79.293	Oryctolagus_cuniculus
ENSELUG00000020072	smfn	75	77.419	ENSORLG00000005119	smfn	70	77.419	Oryzias_latipes
ENSELUG00000020072	smfn	75	77.419	ENSORLG00020010121	smfn	70	77.419	Oryzias_latipes_hni
ENSELUG00000020072	smfn	78	76.991	ENSORLG00015015699	smfn	70	76.991	Oryzias_latipes_hsok
ENSELUG00000020072	smfn	56	82.443	ENSOMEG00000008940	-	99	82.394	Oryzias_melastigma
ENSELUG00000020072	smfn	75	76.959	ENSOMEG00000016878	REXO2	79	76.959	Oryzias_melastigma
ENSELUG00000020072	smfn	69	79.798	ENSOGAG00000016860	REXO2	84	79.798	Otolemur_garnettii
ENSELUG00000020072	smfn	69	79.293	ENSOARG00000001040	REXO2	93	79.293	Ovis_aries
ENSELUG00000020072	smfn	69	79.293	ENSPPAG00000039849	REXO2	84	79.293	Pan_paniscus
ENSELUG00000020072	smfn	69	79.293	ENSPPRG00000007255	REXO2	84	79.293	Panthera_pardus
ENSELUG00000020072	smfn	65	78.610	ENSPTIG00000015578	REXO2	99	78.610	Panthera_tigris_altaica
ENSELUG00000020072	smfn	69	79.293	ENSPTRG00000004306	REXO2	84	79.293	Pan_troglodytes
ENSELUG00000020072	smfn	69	79.293	ENSPANG00000010675	REXO2	84	79.293	Papio_anubis
ENSELUG00000020072	smfn	79	76.522	ENSPKIG00000000911	smfn	77	90.541	Paramormyrops_kingsleyae
ENSELUG00000020072	smfn	69	79.293	ENSPSIG00000005151	REXO2	72	79.293	Pelodiscus_sinensis
ENSELUG00000020072	smfn	63	83.978	ENSPMGG00000007442	smfn	96	83.978	Periophthalmus_magnuspinnatus
ENSELUG00000020072	smfn	74	60.280	ENSPEMG00000001421	Rexo2	88	60.280	Peromyscus_maniculatus_bairdii
ENSELUG00000020072	smfn	69	78.000	ENSPCIG00000011227	REXO2	53	78.000	Phascolarctos_cinereus
ENSELUG00000020072	smfn	86	67.050	ENSPFOG00000017861	smfn	98	80.303	Poecilia_formosa
ENSELUG00000020072	smfn	73	67.411	ENSPLAG00000007327	REXO2	86	67.411	Poecilia_latipinna
ENSELUG00000020072	smfn	86	67.050	ENSPMEG00000017343	smfn	93	67.050	Poecilia_mexicana
ENSELUG00000020072	smfn	86	66.284	ENSPREG00000016438	smfn	93	66.284	Poecilia_reticulata
ENSELUG00000020072	smfn	69	79.293	ENSPPYG00000003895	REXO2	84	79.293	Pongo_abelii
ENSELUG00000020072	smfn	69	78.788	ENSPCAG00000005237	REXO2	84	78.788	Procavia_capensis
ENSELUG00000020072	smfn	60	77.011	ENSPCOG00000027639	REXO2	89	77.011	Propithecus_coquereli
ENSELUG00000020072	smfn	69	67.500	ENSPVAG00000005295	REXO2	84	67.500	Pteropus_vampyrus
ENSELUG00000020072	smfn	69	77.889	ENSPNYG00000018401	smfn	76	77.889	Pundamilia_nyererei
ENSELUG00000020072	smfn	69	87.879	ENSPNAG00000005290	smfn	79	83.645	Pygocentrus_nattereri
ENSELUG00000020072	smfn	74	73.832	ENSRNOG00000018939	Rexo2	89	73.832	Rattus_norvegicus
ENSELUG00000020072	smfn	69	79.293	ENSRBIG00000037809	REXO2	84	79.293	Rhinopithecus_bieti
ENSELUG00000020072	smfn	69	79.293	ENSRROG00000038928	REXO2	84	79.293	Rhinopithecus_roxellana
ENSELUG00000020072	smfn	62	44.086	YLR059C	REX2	69	44.086	Saccharomyces_cerevisiae
ENSELUG00000020072	smfn	69	79.798	ENSSBOG00000028651	REXO2	84	79.798	Saimiri_boliviensis_boliviensis
ENSELUG00000020072	smfn	68	79.592	ENSSHAG00000008008	REXO2	84	79.592	Sarcophilus_harrisii
ENSELUG00000020072	smfn	65	83.422	ENSSFOG00015022414	smfn	99	83.422	Scleropages_formosus
ENSELUG00000020072	smfn	98	63.763	ENSSMAG00000003168	smfn	99	63.763	Scophthalmus_maximus
ENSELUG00000020072	smfn	69	81.500	ENSSDUG00000015624	smfn	70	81.500	Seriola_dumerili
ENSELUG00000020072	smfn	98	63.028	ENSSLDG00000014005	smfn	98	63.028	Seriola_lalandi_dorsalis
ENSELUG00000020072	smfn	57	72.180	ENSSPUG00000006005	REXO2	85	72.956	Sphenodon_punctatus
ENSELUG00000020072	smfn	64	85.484	ENSSPAG00000001530	smfn	100	85.484	Stegastes_partitus
ENSELUG00000020072	smfn	69	79.293	ENSSSCG00000015056	REXO2	84	79.293	Sus_scrofa
ENSELUG00000020072	smfn	69	77.778	ENSTGUG00000000121	REXO2	90	73.333	Taeniopygia_guttata
ENSELUG00000020072	smfn	67	77.949	ENSTRUG00000021529	smfn	81	71.239	Takifugu_rubripes
ENSELUG00000020072	smfn	66	82.105	ENSTNIG00000008588	smfn	88	80.000	Tetraodon_nigroviridis
ENSELUG00000020072	smfn	69	79.798	ENSTBEG00000017040	REXO2	84	79.798	Tupaia_belangeri
ENSELUG00000020072	smfn	69	78.788	ENSTTRG00000014928	REXO2	84	78.788	Tursiops_truncatus
ENSELUG00000020072	smfn	69	72.000	ENSUAMG00000019096	REXO2	81	84.076	Ursus_americanus
ENSELUG00000020072	smfn	69	79.293	ENSUMAG00000003770	REXO2	84	79.293	Ursus_maritimus
ENSELUG00000020072	smfn	65	60.428	ENSVPAG00000006301	REXO2	99	60.428	Vicugna_pacos
ENSELUG00000020072	smfn	69	79.293	ENSVVUG00000025223	REXO2	84	79.293	Vulpes_vulpes
ENSELUG00000020072	smfn	69	81.910	ENSXETG00000012648	rexo2	80	82.653	Xenopus_tropicalis
ENSELUG00000020072	smfn	66	77.368	ENSXCOG00000018838	smfn	92	81.111	Xiphophorus_couchianus
ENSELUG00000020072	smfn	66	80.628	ENSXMAG00000021125	smfn	61	80.628	Xiphophorus_maculatus