EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000020080 (Gene tree)
Gene ID: 105019327
Gene Symbol: znf407
Alias: si:ch73-173g15.1
Full Name: zinc finger protein 407
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 142475 bases
Position: chrLG20:4335632-4478106
Accession: 105019327
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000039796	zf-C2H2	PF00096.26	2.9e-22	1	5
ENSELUP00000039796	zf-C2H2	PF00096.26	2.9e-22	2	5
ENSELUP00000039796	zf-C2H2	PF00096.26	2.9e-22	3	5
ENSELUP00000039796	zf-C2H2	PF00096.26	2.9e-22	4	5
ENSELUP00000039796	zf-C2H2	PF00096.26	2.9e-22	5	5
ENSELUP00000039796	zf-met	PF12874.7	0.00033	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000041634	-	4527	XM_013139491	ENSELUP00000039796	1508 (aa)	XP_012994945	-

Gene Model

Click here to download ENSELUG00000020080's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000020080's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000020080	znf407	62	78.302	ENSAPOG00000004966	znf407	99	77.129	Acanthochromis_polyacanthus
ENSELUG00000020080	znf407	58	81.383	ENSACIG00000014233	znf407	98	80.674	Amphilophus_citrinellus
ENSELUG00000020080	znf407	55	78.179	ENSATEG00000024492	znf407	99	76.730	Anabas_testudineus
ENSELUG00000020080	znf407	54	69.449	ENSSPAG00000016199	znf407	98	71.090	Stegastes_partitus