EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000020261 (Gene tree)
Gene ID: 105013001
Gene Symbol: setd1a
Alias: -
Full Name: histone-lysine N-methyltransferase SETD1A
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 15979 bases
Position: chrLG11:26262656-26278634
Accession: 105013001
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000021096	RRM_1	PF00076.22	0.00022	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000041702	-	6318	XM_013135873	ENSELUP00000021096	2105 (aa)	XP_012991327	-

Gene Model

Click here to download ENSELUG00000020261's gene model file

Pathways

Pathway ID	Pathway Name	Source
els00310	Lysine degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000020261's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000020261	setd1a	55	59.831	ENSELUG00000020846	setd1ba	53	63.190

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000020261	setd1a	82	91.045	ENSAPOG00000018002	setd1a	79	89.952	Acanthochromis_polyacanthus
ENSELUG00000020261	setd1a	75	76.966	ENSACIG00000007144	setd1a	98	81.571	Amphilophus_citrinellus
ENSELUG00000020261	setd1a	55	77.044	ENSACAG00000007606	-	72	73.810	Anolis_carolinensis
ENSELUG00000020261	setd1a	72	75.455	ENSACLG00000024747	setd1a	100	60.683	Astatotilapia_calliptera
ENSELUG00000020261	setd1a	59	74.157	ENSAMXG00000009497	setd1a	95	61.532	Astyanax_mexicanus
ENSELUG00000020261	setd1a	73	73.895	ENSCSEG00000021605	setd1a	96	64.248	Cynoglossus_semilaevis
ENSELUG00000020261	setd1a	52	60.390	ENSDARG00000060030	setd1a	51	62.426	Danio_rerio
ENSELUG00000020261	setd1a	78	72.472	ENSFHEG00000023258	setd1a	96	91.379	Fundulus_heteroclitus
ENSELUG00000020261	setd1a	69	83.642	ENSGAFG00000011698	setd1a	84	83.642	Gambusia_affinis
ENSELUG00000020261	setd1a	72	74.318	ENSHBUG00000008893	setd1a	100	60.777	Haplochromis_burtoni
ENSELUG00000020261	setd1a	70	79.282	ENSHCOG00000003119	setd1a	96	79.006	Hippocampus_comes
ENSELUG00000020261	setd1a	80	59.548	ENSIPUG00000007413	setd1a	100	56.567	Ictalurus_punctatus
ENSELUG00000020261	setd1a	74	56.473	ENSKMAG00000009484	setd1a	100	59.123	Kryptolebias_marmoratus
ENSELUG00000020261	setd1a	77	83.333	ENSMAMG00000021851	setd1a	95	85.385	Mastacembelus_armatus
ENSELUG00000020261	setd1a	72	75.455	ENSMZEG00005023141	setd1a	100	60.605	Maylandia_zebra
ENSELUG00000020261	setd1a	71	83.427	ENSMMOG00000016992	setd1a	97	82.825	Mola_mola
ENSELUG00000020261	setd1a	72	73.864	ENSNBRG00000004760	setd1a	100	60.690	Neolamprologus_brichardi
ENSELUG00000020261	setd1a	84	74.503	ENSONIG00000009854	setd1a	85	74.503	Oreochromis_niloticus
ENSELUG00000020261	setd1a	100	58.425	ENSOMEG00000019732	setd1a	96	66.173	Oryzias_melastigma
ENSELUG00000020261	setd1a	53	64.309	ENSOGAG00000028006	-	50	71.429	Otolemur_garnettii
ENSELUG00000020261	setd1a	68	56.453	ENSPMEG00000005864	setd1a	100	58.049	Poecilia_mexicana
ENSELUG00000020261	setd1a	76	74.487	ENSPNYG00000014139	setd1a	100	60.664	Pundamilia_nyererei
ENSELUG00000020261	setd1a	60	70.133	ENSSFOG00015007013	setd1a	70	70.488	Scleropages_formosus
ENSELUG00000020261	setd1a	74	71.008	ENSTRUG00000008953	setd1a	85	69.263	Takifugu_rubripes
ENSELUG00000020261	setd1a	76	84.545	ENSTNIG00000014930	setd1a	52	68.644	Tetraodon_nigroviridis