EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000020276 (Gene tree)
Gene ID: 105022889
Gene Symbol: -
Alias: -
Full Name: pre-mRNA processing factor 19
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 5514 bases
Position: chrLG25:6928827-6934340
Accession: 105022889
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000021030	Prp19	PF08606.11	1.9e-33	1	1
ENSELUP00000039852	Prp19	PF08606.11	2.4e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000031568	-	1509	-	ENSELUP00000039852	502 (aa)	-	-
ENSELUT00000041680	-	1515	XM_010891637	ENSELUP00000021030	504 (aa)	XP_010889939	-

Gene Model

Click here to download ENSELUG00000020276's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03040	Spliceosome	KEGG
els04120	Ubiquitin mediated proteolysis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000020276's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000020276	-	56	31.395	ENSELUG00000007510	prpf4	58	31.395
ENSELUG00000020276	-	100	83.762	ENSELUG00000004578	prpf19	100	83.762

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000020276	-	100	84.554	ENSG00000110107	PRPF19	100	84.762	Homo_sapiens
ENSELUG00000020276	-	100	92.277	ENSAPOG00000017823	prpf19	100	92.277	Acanthochromis_polyacanthus
ENSELUG00000020276	-	100	84.337	ENSAMEG00000007375	PRPF19	99	84.337	Ailuropoda_melanoleuca
ENSELUG00000020276	-	99	91.270	ENSACIG00000015876	prpf19	99	91.270	Amphilophus_citrinellus
ENSELUG00000020276	-	100	91.881	ENSAOCG00000020444	prpf19	100	91.881	Amphiprion_ocellaris
ENSELUG00000020276	-	100	91.881	ENSAPEG00000016076	prpf19	100	91.881	Amphiprion_percula
ENSELUG00000020276	-	100	92.079	ENSATEG00000008840	prpf19	100	92.079	Anabas_testudineus
ENSELUG00000020276	-	100	84.950	ENSACAG00000017797	PRPF19	100	84.950	Anolis_carolinensis
ENSELUG00000020276	-	100	84.356	ENSANAG00000021762	PRPF19	100	84.356	Aotus_nancymaae
ENSELUG00000020276	-	100	91.881	ENSACLG00000009416	prpf19	100	91.881	Astatotilapia_calliptera
ENSELUG00000020276	-	100	91.881	ENSAMXG00000011547	prpf19	100	91.881	Astyanax_mexicanus
ENSELUG00000020276	-	100	84.554	ENSBTAG00000014366	PRPF19	100	84.554	Bos_taurus
ENSELUG00000020276	-	100	52.569	WBGene00020423	prp-19	100	52.569	Caenorhabditis_elegans
ENSELUG00000020276	-	100	84.356	ENSCJAG00000016509	PRPF19	100	84.356	Callithrix_jacchus
ENSELUG00000020276	-	100	84.554	ENSCAFG00000016438	PRPF19	98	84.554	Canis_familiaris
ENSELUG00000020276	-	100	84.554	ENSCAFG00020012565	PRPF19	100	84.554	Canis_lupus_dingo
ENSELUG00000020276	-	100	84.554	ENSCHIG00000018281	PRPF19	100	84.554	Capra_hircus
ENSELUG00000020276	-	99	84.369	ENSTSYG00000006860	PRPF19	99	84.369	Carlito_syrichta
ENSELUG00000020276	-	99	84.800	ENSCAPG00000016225	PRPF19	100	84.800	Cavia_aperea
ENSELUG00000020276	-	100	84.752	ENSCPOG00000020688	PRPF19	100	84.752	Cavia_porcellus
ENSELUG00000020276	-	100	84.356	ENSCCAG00000025839	PRPF19	100	84.356	Cebus_capucinus
ENSELUG00000020276	-	100	84.554	ENSCATG00000041921	PRPF19	100	84.554	Cercocebus_atys
ENSELUG00000020276	-	99	84.940	ENSCLAG00000003338	PRPF19	100	84.940	Chinchilla_lanigera
ENSELUG00000020276	-	100	84.554	ENSCSAG00000006254	PRPF19	100	84.554	Chlorocebus_sabaeus
ENSELUG00000020276	-	62	73.077	ENSCHOG00000005840	PRPF19	100	73.077	Choloepus_hoffmanni
ENSELUG00000020276	-	100	83.937	ENSCPBG00000027061	PRPF19	100	83.564	Chrysemys_picta_bellii
ENSELUG00000020276	-	99	68.778	ENSCING00000016625	-	99	68.778	Ciona_intestinalis
ENSELUG00000020276	-	100	69.246	ENSCSAVG00000002027	-	100	69.216	Ciona_savignyi
ENSELUG00000020276	-	99	84.967	ENSCANG00000027155	PRPF19	99	41.245	Colobus_angolensis_palliatus
ENSELUG00000020276	-	100	84.554	ENSCGRG00001002699	Prpf19	100	84.554	Cricetulus_griseus_chok1gshd
ENSELUG00000020276	-	99	84.095	ENSCGRG00000008964	Prpf19	100	84.095	Cricetulus_griseus_crigri
ENSELUG00000020276	-	100	92.277	ENSCSEG00000010411	prpf19	100	92.277	Cynoglossus_semilaevis
ENSELUG00000020276	-	100	90.099	ENSCVAG00000012011	prpf19	100	90.099	Cyprinodon_variegatus
ENSELUG00000020276	-	100	91.089	ENSDARG00000015239	prpf19	100	91.089	Danio_rerio
ENSELUG00000020276	-	100	84.554	ENSDNOG00000005797	PRPF19	100	84.554	Dasypus_novemcinctus
ENSELUG00000020276	-	100	84.752	ENSDORG00000006906	Prpf19	100	84.752	Dipodomys_ordii
ENSELUG00000020276	-	100	65.941	FBgn0261119	Prp19	99	65.941	Drosophila_melanogaster
ENSELUG00000020276	-	90	85.446	ENSETEG00000012295	PRPF19	87	85.514	Echinops_telfairi
ENSELUG00000020276	-	83	75.772	ENSEBUG00000013075	prpf19	100	75.772	Eptatretus_burgeri
ENSELUG00000020276	-	100	84.277	ENSEASG00005008056	PRPF19	98	84.277	Equus_asinus_asinus
ENSELUG00000020276	-	100	84.356	ENSECAG00000007322	PRPF19	100	84.356	Equus_caballus
ENSELUG00000020276	-	100	84.554	ENSFCAG00000013668	PRPF19	100	84.554	Felis_catus
ENSELUG00000020276	-	100	83.960	ENSFALG00000012084	PRPF19	100	83.960	Ficedula_albicollis
ENSELUG00000020276	-	88	81.390	ENSFDAG00000009420	PRPF19	99	81.390	Fukomys_damarensis
ENSELUG00000020276	-	100	90.297	ENSFHEG00000022135	prpf19	100	90.297	Fundulus_heteroclitus
ENSELUG00000020276	-	100	91.881	ENSGMOG00000014756	prpf19	100	91.881	Gadus_morhua
ENSELUG00000020276	-	100	83.564	ENSGALG00000036530	PRPF19	100	83.564	Gallus_gallus
ENSELUG00000020276	-	100	90.297	ENSGAFG00000008931	prpf19	100	90.297	Gambusia_affinis
ENSELUG00000020276	-	100	91.485	ENSGACG00000017976	prpf19	100	91.485	Gasterosteus_aculeatus
ENSELUG00000020276	-	100	83.762	ENSGAGG00000013328	PRPF19	100	83.762	Gopherus_agassizii
ENSELUG00000020276	-	100	84.554	ENSGGOG00000008648	PRPF19	100	84.554	Gorilla_gorilla
ENSELUG00000020276	-	100	91.881	ENSHBUG00000008394	prpf19	100	91.881	Haplochromis_burtoni
ENSELUG00000020276	-	100	84.752	ENSHGLG00000003934	PRPF19	100	84.752	Heterocephalus_glaber_female
ENSELUG00000020276	-	99	68.810	ENSHGLG00100010649	PRPF19	100	68.273	Heterocephalus_glaber_male
ENSELUG00000020276	-	100	90.693	ENSHCOG00000016720	prpf19	100	90.891	Hippocampus_comes
ENSELUG00000020276	-	100	90.891	ENSIPUG00000013084	prpf19	100	90.891	Ictalurus_punctatus
ENSELUG00000020276	-	100	84.158	ENSSTOG00000001598	PRPF19	100	84.158	Ictidomys_tridecemlineatus
ENSELUG00000020276	-	100	84.752	ENSJJAG00000020609	Prpf19	100	84.752	Jaculus_jaculus
ENSELUG00000020276	-	100	90.495	ENSKMAG00000010257	prpf19	100	90.495	Kryptolebias_marmoratus
ENSELUG00000020276	-	100	91.683	ENSLBEG00000027436	prpf19	100	91.683	Labrus_bergylta
ENSELUG00000020276	-	100	83.929	ENSLACG00000003434	PRPF19	100	83.929	Latimeria_chalumnae
ENSELUG00000020276	-	91	78.252	ENSLOCG00000008123	prpf19	100	78.252	Lepisosteus_oculatus
ENSELUG00000020276	-	100	81.801	ENSLAFG00000002644	PRPF19	100	81.801	Loxodonta_africana
ENSELUG00000020276	-	100	84.554	ENSMFAG00000036743	PRPF19	100	84.554	Macaca_fascicularis
ENSELUG00000020276	-	100	84.554	ENSMMUG00000014530	PRPF19	100	84.554	Macaca_mulatta
ENSELUG00000020276	-	100	84.554	ENSMNEG00000044485	PRPF19	100	84.554	Macaca_nemestrina
ENSELUG00000020276	-	100	84.554	ENSMLEG00000043312	PRPF19	100	84.554	Mandrillus_leucophaeus
ENSELUG00000020276	-	100	91.881	ENSMAMG00000006843	prpf19	100	91.881	Mastacembelus_armatus
ENSELUG00000020276	-	100	91.881	ENSMZEG00005013356	prpf19	100	91.881	Maylandia_zebra
ENSELUG00000020276	-	98	79.000	ENSMGAG00000003180	PRPF19	100	79.000	Meleagris_gallopavo
ENSELUG00000020276	-	99	84.569	ENSMAUG00000012585	Prpf19	99	84.569	Mesocricetus_auratus
ENSELUG00000020276	-	100	84.554	ENSMICG00000011236	PRPF19	100	84.554	Microcebus_murinus
ENSELUG00000020276	-	100	84.554	ENSMOCG00000010383	Prpf19	100	84.554	Microtus_ochrogaster
ENSELUG00000020276	-	100	92.262	ENSMMOG00000003138	prpf19	100	92.262	Mola_mola
ENSELUG00000020276	-	100	84.554	ENSMODG00000020338	PRPF19	100	84.554	Monodelphis_domestica
ENSELUG00000020276	-	99	84.241	ENSMALG00000010981	prpf19	99	84.241	Monopterus_albus
ENSELUG00000020276	-	100	84.554	MGP_CAROLIEiJ_G0022704	Prpf19	100	84.554	Mus_caroli
ENSELUG00000020276	-	100	84.554	ENSMUSG00000024735	Prpf19	100	84.554	Mus_musculus
ENSELUG00000020276	-	100	84.554	MGP_PahariEiJ_G0014198	Prpf19	100	84.554	Mus_pahari
ENSELUG00000020276	-	100	84.554	MGP_SPRETEiJ_G0023618	Prpf19	100	84.554	Mus_spretus
ENSELUG00000020276	-	100	84.554	ENSMPUG00000014432	PRPF19	100	84.554	Mustela_putorius_furo
ENSELUG00000020276	-	100	81.923	ENSMLUG00000017597	PRPF19	100	81.923	Myotis_lucifugus
ENSELUG00000020276	-	100	84.752	ENSNGAG00000012671	Prpf19	100	84.752	Nannospalax_galili
ENSELUG00000020276	-	100	92.079	ENSNBRG00000000055	prpf19	100	92.079	Neolamprologus_brichardi
ENSELUG00000020276	-	100	84.554	ENSNLEG00000013618	PRPF19	100	84.554	Nomascus_leucogenys
ENSELUG00000020276	-	99	81.928	ENSOPRG00000008630	PRPF19	100	81.928	Ochotona_princeps
ENSELUG00000020276	-	100	84.950	ENSODEG00000004043	PRPF19	100	84.950	Octodon_degus
ENSELUG00000020276	-	100	92.079	ENSONIG00000004880	prpf19	100	92.079	Oreochromis_niloticus
ENSELUG00000020276	-	100	81.179	ENSOCUG00000015689	PRPF19	100	81.179	Oryctolagus_cuniculus
ENSELUG00000020276	-	100	90.693	ENSORLG00000004666	prpf19	100	90.693	Oryzias_latipes
ENSELUG00000020276	-	100	90.693	ENSORLG00020013561	prpf19	100	90.693	Oryzias_latipes_hni
ENSELUG00000020276	-	100	90.693	ENSORLG00015022196	prpf19	100	90.693	Oryzias_latipes_hsok
ENSELUG00000020276	-	100	90.711	ENSOMEG00000004424	prpf19	100	90.711	Oryzias_melastigma
ENSELUG00000020276	-	100	84.356	ENSOGAG00000016756	PRPF19	100	84.356	Otolemur_garnettii
ENSELUG00000020276	-	100	84.554	ENSOARG00000015596	PRPF19	100	84.554	Ovis_aries
ENSELUG00000020276	-	99	83.104	ENSPPAG00000030246	PRPF19	100	83.104	Pan_paniscus
ENSELUG00000020276	-	100	84.554	ENSPPRG00000002470	PRPF19	100	84.554	Panthera_pardus
ENSELUG00000020276	-	99	84.739	ENSPTIG00000006541	PRPF19	99	84.739	Panthera_tigris_altaica
ENSELUG00000020276	-	100	84.554	ENSPTRG00000003724	PRPF19	100	84.554	Pan_troglodytes
ENSELUG00000020276	-	100	84.554	ENSPANG00000002762	PRPF19	100	84.554	Papio_anubis
ENSELUG00000020276	-	100	90.693	ENSPKIG00000019715	prpf19	100	90.693	Paramormyrops_kingsleyae
ENSELUG00000020276	-	83	82.857	ENSPSIG00000007497	PRPF19	100	82.857	Pelodiscus_sinensis
ENSELUG00000020276	-	100	91.287	ENSPMGG00000017527	prpf19	100	91.287	Periophthalmus_magnuspinnatus
ENSELUG00000020276	-	99	84.095	ENSPEMG00000019270	Prpf19	100	84.095	Peromyscus_maniculatus_bairdii
ENSELUG00000020276	-	99	84.615	ENSPCIG00000003485	PRPF19	79	84.615	Phascolarctos_cinereus
ENSELUG00000020276	-	100	90.297	ENSPFOG00000002558	prpf19	100	90.297	Poecilia_formosa
ENSELUG00000020276	-	100	90.297	ENSPLAG00000017942	prpf19	100	90.297	Poecilia_latipinna
ENSELUG00000020276	-	100	90.297	ENSPMEG00000008638	prpf19	100	90.297	Poecilia_mexicana
ENSELUG00000020276	-	100	90.909	ENSPREG00000002489	prpf19	96	90.909	Poecilia_reticulata
ENSELUG00000020276	-	100	84.696	ENSPPYG00000003202	PRPF19	91	84.696	Pongo_abelii
ENSELUG00000020276	-	100	84.356	ENSPCAG00000001930	PRPF19	100	84.356	Procavia_capensis
ENSELUG00000020276	-	100	84.989	ENSPCOG00000014017	PRPF19	100	84.989	Propithecus_coquereli
ENSELUG00000020276	-	100	84.554	ENSPVAG00000014669	PRPF19	100	84.554	Pteropus_vampyrus
ENSELUG00000020276	-	100	91.881	ENSPNYG00000000859	prpf19	100	91.881	Pundamilia_nyererei
ENSELUG00000020276	-	100	91.485	ENSPNAG00000019245	prpf19	100	91.485	Pygocentrus_nattereri
ENSELUG00000020276	-	100	84.554	ENSRNOG00000020897	Prpf19	100	84.554	Rattus_norvegicus
ENSELUG00000020276	-	100	84.554	ENSRBIG00000036672	PRPF19	100	84.554	Rhinopithecus_bieti
ENSELUG00000020276	-	100	84.554	ENSRROG00000041572	PRPF19	100	84.554	Rhinopithecus_roxellana
ENSELUG00000020276	-	100	84.356	ENSSBOG00000022840	PRPF19	100	84.356	Saimiri_boliviensis_boliviensis
ENSELUG00000020276	-	100	84.554	ENSSHAG00000009462	PRPF19	100	84.554	Sarcophilus_harrisii
ENSELUG00000020276	-	100	89.683	ENSSFOG00015001236	prpf19	100	89.683	Scleropages_formosus
ENSELUG00000020276	-	100	92.673	ENSSMAG00000002273	prpf19	100	92.673	Scophthalmus_maximus
ENSELUG00000020276	-	100	92.475	ENSSDUG00000003299	prpf19	100	92.475	Seriola_dumerili
ENSELUG00000020276	-	100	92.475	ENSSLDG00000003019	prpf19	100	92.475	Seriola_lalandi_dorsalis
ENSELUG00000020276	-	100	82.970	ENSSPUG00000019328	PRPF19	100	82.970	Sphenodon_punctatus
ENSELUG00000020276	-	100	92.277	ENSSPAG00000008546	prpf19	100	92.277	Stegastes_partitus
ENSELUG00000020276	-	100	84.752	ENSSSCG00000013107	PRPF19	100	84.752	Sus_scrofa
ENSELUG00000020276	-	100	84.158	ENSTGUG00000006319	PRPF19	100	84.158	Taeniopygia_guttata
ENSELUG00000020276	-	100	91.089	ENSTRUG00000008502	prpf19	100	91.089	Takifugu_rubripes
ENSELUG00000020276	-	67	90.801	ENSTNIG00000014219	prpf19	77	90.801	Tetraodon_nigroviridis
ENSELUG00000020276	-	100	84.356	ENSTTRG00000012476	PRPF19	100	84.356	Tursiops_truncatus
ENSELUG00000020276	-	100	84.554	ENSUAMG00000011280	PRPF19	100	84.554	Ursus_americanus
ENSELUG00000020276	-	84	83.688	ENSUMAG00000011609	PRPF19	83	83.688	Ursus_maritimus
ENSELUG00000020276	-	99	84.835	ENSVPAG00000010516	PRPF19	100	84.835	Vicugna_pacos
ENSELUG00000020276	-	100	84.554	ENSVVUG00000005291	PRPF19	100	84.554	Vulpes_vulpes
ENSELUG00000020276	-	100	79.727	ENSXETG00000011938	prpf19	100	79.727	Xenopus_tropicalis
ENSELUG00000020276	-	100	90.297	ENSXCOG00000003141	prpf19	100	90.297	Xiphophorus_couchianus
ENSELUG00000020276	-	100	90.495	ENSXMAG00000008485	prpf19	100	90.495	Xiphophorus_maculatus