EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000020301 (Gene tree)
Gene ID: 105025074
Gene Symbol: xrcc6
Alias: Ku autoantigen|Ku70|g22p1|wu:fi87b06|zgc:64131
Full Name: X-ray repair cross complementing 6
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 6969 bases
Position: chrLG05:16974520-16981488
Accession: 105025074
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000039967	SAP	PF02037.27	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000031812	-	2292	XM_010895503	ENSELUP00000039967	610 (aa)	XP_010893805	UPI000577D086

Gene Model

Click here to download ENSELUG00000020301's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03450	Non-homologous end-joining	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000020301's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000020301	xrcc6	100	54.560	ENSG00000196419	XRCC6	100	54.560	Homo_sapiens
ENSELUG00000020301	xrcc6	99	75.369	ENSAPOG00000012704	xrcc6	100	75.369	Acanthochromis_polyacanthus
ENSELUG00000020301	xrcc6	100	75.574	ENSACIG00000021277	xrcc6	100	75.574	Amphilophus_citrinellus
ENSELUG00000020301	xrcc6	100	75.246	ENSAOCG00000021344	xrcc6	100	75.246	Amphiprion_ocellaris
ENSELUG00000020301	xrcc6	100	75.246	ENSAPEG00000020712	xrcc6	100	75.246	Amphiprion_percula
ENSELUG00000020301	xrcc6	100	75.082	ENSATEG00000007119	xrcc6	100	75.082	Anabas_testudineus
ENSELUG00000020301	xrcc6	90	58.951	ENSAPLG00000004469	XRCC6	99	58.951	Anas_platyrhynchos
ENSELUG00000020301	xrcc6	100	49.593	ENSANAG00000035230	-	100	49.511	Aotus_nancymaae
ENSELUG00000020301	xrcc6	100	48.936	ENSANAG00000020017	-	100	48.609	Aotus_nancymaae
ENSELUG00000020301	xrcc6	100	46.613	ENSANAG00000023445	-	100	46.774	Aotus_nancymaae
ENSELUG00000020301	xrcc6	100	54.397	ENSANAG00000018684	XRCC6	100	54.560	Aotus_nancymaae
ENSELUG00000020301	xrcc6	100	75.410	ENSACLG00000018608	xrcc6	100	75.410	Astatotilapia_calliptera
ENSELUG00000020301	xrcc6	99	78.654	ENSAMXG00000007545	xrcc6	100	78.654	Astyanax_mexicanus
ENSELUG00000020301	xrcc6	100	54.397	ENSCJAG00000045512	XRCC6	100	54.560	Callithrix_jacchus
ENSELUG00000020301	xrcc6	99	54.412	ENSTSYG00000011348	XRCC6	99	54.575	Carlito_syrichta
ENSELUG00000020301	xrcc6	92	58.065	ENSCCAG00000030468	-	100	58.065	Cebus_capucinus
ENSELUG00000020301	xrcc6	100	43.719	ENSCCAG00000035711	-	100	43.883	Cebus_capucinus
ENSELUG00000020301	xrcc6	100	46.154	ENSCCAG00000037663	-	97	46.154	Cebus_capucinus
ENSELUG00000020301	xrcc6	100	51.792	ENSCCAG00000030041	-	95	51.792	Cebus_capucinus
ENSELUG00000020301	xrcc6	100	54.723	ENSCATG00000042366	XRCC6	100	54.723	Cercocebus_atys
ENSELUG00000020301	xrcc6	99	53.682	ENSCLAG00000016669	XRCC6	99	53.846	Chinchilla_lanigera
ENSELUG00000020301	xrcc6	100	54.723	ENSCSAG00000005784	XRCC6	100	54.723	Chlorocebus_sabaeus
ENSELUG00000020301	xrcc6	99	58.007	ENSCPBG00000020535	XRCC6	99	58.007	Chrysemys_picta_bellii
ENSELUG00000020301	xrcc6	97	34.167	ENSCING00000000633	-	95	34.536	Ciona_intestinalis
ENSELUG00000020301	xrcc6	100	54.723	ENSCANG00000031032	XRCC6	100	54.723	Colobus_angolensis_palliatus
ENSELUG00000020301	xrcc6	99	50.082	ENSCGRG00001019029	Xrcc6	99	50.082	Cricetulus_griseus_chok1gshd
ENSELUG00000020301	xrcc6	99	54.036	ENSCGRG00000001528	Xrcc6	99	54.036	Cricetulus_griseus_crigri
ENSELUG00000020301	xrcc6	100	70.492	ENSCSEG00000020434	xrcc6	100	70.492	Cynoglossus_semilaevis
ENSELUG00000020301	xrcc6	100	73.934	ENSCVAG00000002189	xrcc6	100	73.934	Cyprinodon_variegatus
ENSELUG00000020301	xrcc6	99	75.410	ENSDARG00000071551	xrcc6	99	75.246	Danio_rerio
ENSELUG00000020301	xrcc6	78	50.769	ENSETEG00000015333	-	77	52.308	Echinops_telfairi
ENSELUG00000020301	xrcc6	99	53.846	ENSEASG00005001514	XRCC6	99	54.664	Equus_asinus_asinus
ENSELUG00000020301	xrcc6	99	53.846	ENSECAG00000017563	XRCC6	99	54.513	Equus_caballus
ENSELUG00000020301	xrcc6	99	58.170	ENSFALG00000011908	XRCC6	96	58.660	Ficedula_albicollis
ENSELUG00000020301	xrcc6	100	73.607	ENSFHEG00000016833	xrcc6	100	73.607	Fundulus_heteroclitus
ENSELUG00000020301	xrcc6	99	65.961	ENSGMOG00000013524	xrcc6	100	65.961	Gadus_morhua
ENSELUG00000020301	xrcc6	99	57.586	ENSGALG00000011932	XRCC6	99	57.749	Gallus_gallus
ENSELUG00000020301	xrcc6	100	73.279	ENSGAFG00000008130	xrcc6	100	73.279	Gambusia_affinis
ENSELUG00000020301	xrcc6	99	73.453	ENSGACG00000004868	xrcc6	99	73.453	Gasterosteus_aculeatus
ENSELUG00000020301	xrcc6	99	58.170	ENSGAGG00000017518	XRCC6	99	58.170	Gopherus_agassizii
ENSELUG00000020301	xrcc6	100	54.560	ENSGGOG00000015885	XRCC6	100	54.560	Gorilla_gorilla
ENSELUG00000020301	xrcc6	93	75.265	ENSHBUG00000023281	xrcc6	100	75.265	Haplochromis_burtoni
ENSELUG00000020301	xrcc6	99	53.443	ENSHGLG00000018078	XRCC6	99	53.279	Heterocephalus_glaber_female
ENSELUG00000020301	xrcc6	99	53.443	ENSHGLG00100011264	XRCC6	99	53.279	Heterocephalus_glaber_male
ENSELUG00000020301	xrcc6	100	70.492	ENSHCOG00000009821	xrcc6	100	70.492	Hippocampus_comes
ENSELUG00000020301	xrcc6	99	75.534	ENSIPUG00000000767	xrcc6	99	75.534	Ictalurus_punctatus
ENSELUG00000020301	xrcc6	99	54.337	ENSSTOG00000009490	XRCC6	99	54.828	Ictidomys_tridecemlineatus
ENSELUG00000020301	xrcc6	99	49.100	ENSJJAG00000017136	Xrcc6	99	50.412	Jaculus_jaculus
ENSELUG00000020301	xrcc6	99	74.548	ENSKMAG00000002141	xrcc6	99	74.548	Kryptolebias_marmoratus
ENSELUG00000020301	xrcc6	100	73.115	ENSLBEG00000002691	xrcc6	99	73.115	Labrus_bergylta
ENSELUG00000020301	xrcc6	84	68.269	ENSLOCG00000011533	xrcc6	99	71.000	Lepisosteus_oculatus
ENSELUG00000020301	xrcc6	100	54.723	ENSMFAG00000003352	XRCC6	100	54.723	Macaca_fascicularis
ENSELUG00000020301	xrcc6	100	54.723	ENSMMUG00000001856	XRCC6	100	54.723	Macaca_mulatta
ENSELUG00000020301	xrcc6	100	54.723	ENSMNEG00000035076	XRCC6	100	54.723	Macaca_nemestrina
ENSELUG00000020301	xrcc6	100	54.723	ENSMLEG00000019869	XRCC6	100	54.723	Mandrillus_leucophaeus
ENSELUG00000020301	xrcc6	96	72.867	ENSMAMG00000003405	xrcc6	97	72.867	Mastacembelus_armatus
ENSELUG00000020301	xrcc6	100	73.650	ENSMAMG00000003368	xrcc6	100	73.650	Mastacembelus_armatus
ENSELUG00000020301	xrcc6	100	75.246	ENSMZEG00005028080	xrcc6	100	75.246	Maylandia_zebra
ENSELUG00000020301	xrcc6	99	57.586	ENSMGAG00000012146	XRCC6	99	57.749	Meleagris_gallopavo
ENSELUG00000020301	xrcc6	99	54.530	ENSMAUG00000017340	Xrcc6	99	54.530	Mesocricetus_auratus
ENSELUG00000020301	xrcc6	99	54.695	ENSMOCG00000015717	Xrcc6	99	54.860	Microtus_ochrogaster
ENSELUG00000020301	xrcc6	99	72.817	ENSMMOG00000003536	xrcc6	99	72.817	Mola_mola
ENSELUG00000020301	xrcc6	100	73.770	ENSMALG00000013912	xrcc6	95	73.770	Monopterus_albus
ENSELUG00000020301	xrcc6	99	51.311	MGP_CAROLIEiJ_G0020067	Xrcc6	99	51.311	Mus_caroli
ENSELUG00000020301	xrcc6	99	55.082	ENSMUSG00000022471	Xrcc6	99	57.034	Mus_musculus
ENSELUG00000020301	xrcc6	99	55.082	MGP_PahariEiJ_G0020069	Xrcc6	99	55.082	Mus_pahari
ENSELUG00000020301	xrcc6	96	56.164	MGP_SPRETEiJ_G0020967	Xrcc6	99	56.164	Mus_spretus
ENSELUG00000020301	xrcc6	99	53.377	ENSNGAG00000013750	Xrcc6	99	53.618	Nannospalax_galili
ENSELUG00000020301	xrcc6	100	75.738	ENSNBRG00000004125	xrcc6	100	75.738	Neolamprologus_brichardi
ENSELUG00000020301	xrcc6	95	56.110	ENSOPRG00000002386	XRCC6	99	56.110	Ochotona_princeps
ENSELUG00000020301	xrcc6	99	54.010	ENSODEG00000015847	XRCC6	99	53.846	Octodon_degus
ENSELUG00000020301	xrcc6	99	76.480	ENSONIG00000019715	xrcc6	99	76.480	Oreochromis_niloticus
ENSELUG00000020301	xrcc6	67	58.151	ENSOANG00000011328	XRCC6	98	58.151	Ornithorhynchus_anatinus
ENSELUG00000020301	xrcc6	100	53.997	ENSOCUG00000006948	XRCC6	100	54.486	Oryctolagus_cuniculus
ENSELUG00000020301	xrcc6	100	75.450	ENSORLG00020007820	xrcc6	100	75.450	Oryzias_latipes_hni
ENSELUG00000020301	xrcc6	100	75.450	ENSORLG00015006406	xrcc6	100	75.450	Oryzias_latipes_hsok
ENSELUG00000020301	xrcc6	100	75.450	ENSOMEG00000008998	xrcc6	100	75.450	Oryzias_melastigma
ENSELUG00000020301	xrcc6	99	54.664	ENSOGAG00000008821	XRCC6	99	54.992	Otolemur_garnettii
ENSELUG00000020301	xrcc6	90	55.932	ENSPPAG00000037167	XRCC6	100	55.932	Pan_paniscus
ENSELUG00000020301	xrcc6	100	54.560	ENSPTRG00000022548	XRCC6	99	55.631	Pan_troglodytes
ENSELUG00000020301	xrcc6	100	54.560	ENSPTRG00000045824	XRCC6	99	55.631	Pan_troglodytes
ENSELUG00000020301	xrcc6	100	54.886	ENSPANG00000001252	XRCC6	99	56.410	Papio_anubis
ENSELUG00000020301	xrcc6	99	71.593	ENSPKIG00000003974	xrcc6	99	71.593	Paramormyrops_kingsleyae
ENSELUG00000020301	xrcc6	99	70.598	ENSPMGG00000014220	xrcc6	100	70.764	Periophthalmus_magnuspinnatus
ENSELUG00000020301	xrcc6	99	53.871	ENSPEMG00000023446	Xrcc6	99	53.871	Peromyscus_maniculatus_bairdii
ENSELUG00000020301	xrcc6	99	55.848	ENSPCIG00000026409	XRCC6	99	55.848	Phascolarctos_cinereus
ENSELUG00000020301	xrcc6	100	74.426	ENSPFOG00000017173	xrcc6	100	74.426	Poecilia_formosa
ENSELUG00000020301	xrcc6	100	74.098	ENSPLAG00000000562	xrcc6	100	74.098	Poecilia_latipinna
ENSELUG00000020301	xrcc6	100	74.262	ENSPMEG00000018478	xrcc6	100	74.262	Poecilia_mexicana
ENSELUG00000020301	xrcc6	100	74.020	ENSPREG00000020957	xrcc6	93	74.020	Poecilia_reticulata
ENSELUG00000020301	xrcc6	100	49.674	ENSPPYG00000011876	XRCC6	100	50.000	Pongo_abelii
ENSELUG00000020301	xrcc6	99	53.279	ENSPVAG00000001168	XRCC6	99	53.279	Pteropus_vampyrus
ENSELUG00000020301	xrcc6	100	75.082	ENSPNYG00000003815	xrcc6	100	71.451	Pundamilia_nyererei
ENSELUG00000020301	xrcc6	99	54.262	ENSRNOG00000006392	Xrcc6	99	54.426	Rattus_norvegicus
ENSELUG00000020301	xrcc6	100	50.326	ENSRBIG00000039794	XRCC6	99	51.966	Rhinopithecus_bieti
ENSELUG00000020301	xrcc6	100	54.723	ENSRROG00000030297	XRCC6	100	54.723	Rhinopithecus_roxellana
ENSELUG00000020301	xrcc6	67	48.905	ENSSBOG00000024724	-	100	48.905	Saimiri_boliviensis_boliviensis
ENSELUG00000020301	xrcc6	99	54.575	ENSSHAG00000010790	XRCC6	99	54.575	Sarcophilus_harrisii
ENSELUG00000020301	xrcc6	99	75.041	ENSSFOG00015014409	xrcc6	99	75.041	Scleropages_formosus
ENSELUG00000020301	xrcc6	100	76.721	ENSSMAG00000006496	xrcc6	100	76.721	Scophthalmus_maximus
ENSELUG00000020301	xrcc6	100	75.574	ENSSDUG00000007542	xrcc6	100	75.574	Seriola_dumerili
ENSELUG00000020301	xrcc6	100	74.754	ENSSLDG00000009974	xrcc6	100	74.754	Seriola_lalandi_dorsalis
ENSELUG00000020301	xrcc6	99	57.825	ENSSPUG00000012086	XRCC6	99	57.610	Sphenodon_punctatus
ENSELUG00000020301	xrcc6	100	76.721	ENSSPAG00000015199	xrcc6	100	76.721	Stegastes_partitus
ENSELUG00000020301	xrcc6	95	60.137	ENSTGUG00000009852	-	94	60.137	Taeniopygia_guttata
ENSELUG00000020301	xrcc6	99	69.787	ENSTRUG00000017070	xrcc6	99	69.951	Takifugu_rubripes
ENSELUG00000020301	xrcc6	96	69.865	ENSTNIG00000012947	xrcc6	100	69.865	Tetraodon_nigroviridis
ENSELUG00000020301	xrcc6	96	49.658	ENSTBEG00000011736	XRCC6	99	49.658	Tupaia_belangeri
ENSELUG00000020301	xrcc6	99	44.354	ENSTTRG00000006749	XRCC6	99	45.663	Tursiops_truncatus
ENSELUG00000020301	xrcc6	100	74.754	ENSXMAG00000009691	xrcc6	100	74.754	Xiphophorus_maculatus