EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000020545 (Gene tree)
Gene ID: 105024285
Gene Symbol: ddx61
Alias: fk48d07|p54b|si:ch211-175g6.7|wu:fk48d07
Full Name: probable ATP-dependent RNA helicase ddx6
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 11863 bases
Position: chrLG20:22793869-22805731
Accession: 105024285
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000021449	DEAD	PF00270.29	3.9e-41	1	1
ENSELUP00000040128	DEAD	PF00270.29	3.9e-41	1	1
ENSELUP00000040135	DEAD	PF00270.29	3.9e-41	1	1
ENSELUP00000021410	DEAD	PF00270.29	3.9e-25	1	2
ENSELUP00000021410	DEAD	PF00270.29	3.9e-25	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000041843	-	1317	-	ENSELUP00000021410	438 (aa)	-	-
ENSELUT00000032100	-	4917	XM_010894137	ENSELUP00000040128	487 (aa)	XP_010892439	UPI000575EEA8
ENSELUT00000032126	-	5204	-	ENSELUP00000021449	487 (aa)	-	UPI000575EEA8
ENSELUT00000041850	-	5088	XM_020041439	ENSELUP00000040135	487 (aa)	XP_019896998	UPI000575EEA8

Gene Model

Click here to download ENSELUG00000020545's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000020545's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000020545	ddx61	76	30.676	ENSELUG00000015358	ddx23	54	30.676
ENSELUG00000020545	ddx61	78	36.719	ENSELUG00000017904	ddx39b	90	36.623
ENSELUG00000020545	ddx61	70	31.909	ENSELUG00000024602	-	54	31.909
ENSELUG00000020545	ddx61	81	36.341	ENSELUG00000006779	-	85	36.616
ENSELUG00000020545	ddx61	74	31.436	ENSELUG00000009107	ddx5	56	31.818
ENSELUG00000020545	ddx61	77	31.043	ENSELUG00000007424	DDX5	65	31.043
ENSELUG00000020545	ddx61	71	37.500	ENSELUG00000004740	zgc:193690	80	38.172
ENSELUG00000020545	ddx61	67	49.020	ENSELUG00000006743	ddx1	53	49.020
ENSELUG00000020545	ddx61	96	79.424	ENSELUG00000022660	ddx6	98	80.698
ENSELUG00000020545	ddx61	78	36.434	ENSELUG00000010581	DDX39A	93	36.134
ENSELUG00000020545	ddx61	69	38.983	ENSELUG00000005585	ddx59	57	30.749
ENSELUG00000020545	ddx61	75	32.000	ENSELUG00000012963	ddx49	78	32.000
ENSELUG00000020545	ddx61	78	30.900	ENSELUG00000004613	-	61	30.365
ENSELUG00000020545	ddx61	72	31.793	ENSELUG00000017328	ddx4	57	32.075
ENSELUG00000020545	ddx61	79	34.085	ENSELUG00000010260	ddx20	50	34.085
ENSELUG00000020545	ddx61	98	89.876	ENSELUG00000022538	-	98	89.876
ENSELUG00000020545	ddx61	75	35.620	ENSELUG00000000838	-	77	34.897
ENSELUG00000020545	ddx61	69	32.174	ENSELUG00000012126	ddx43	52	32.174
ENSELUG00000020545	ddx61	69	30.194	ENSELUG00000004150	ddx56	69	30.194
ENSELUG00000020545	ddx61	83	31.250	ENSELUG00000009495	ddx47	78	31.250
ENSELUG00000020545	ddx61	77	37.831	ENSELUG00000018528	eif4a3	92	37.831
ENSELUG00000020545	ddx61	76	39.247	ENSELUG00000023923	eif4a2	98	39.452
ENSELUG00000020545	ddx61	76	38.710	ENSELUG00000009963	eif4a1b	91	38.710
ENSELUG00000020545	ddx61	77	30.923	ENSELUG00000023518	-	58	30.846
ENSELUG00000020545	ddx61	72	31.944	ENSELUG00000001184	-	54	32.222
ENSELUG00000020545	ddx61	66	31.884	ENSELUG00000002616	ddx55	57	31.884

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000020545	ddx61	100	85.861	ENSAPOG00000014829	ddx61	100	85.861	Acanthochromis_polyacanthus
ENSELUG00000020545	ddx61	75	94.278	ENSAPOG00000023627	-	93	94.278	Acanthochromis_polyacanthus
ENSELUG00000020545	ddx61	99	82.365	ENSACIG00000018355	-	99	82.365	Amphilophus_citrinellus
ENSELUG00000020545	ddx61	100	86.885	ENSAOCG00000007627	ddx61	100	86.885	Amphiprion_ocellaris
ENSELUG00000020545	ddx61	99	88.589	ENSAOCG00000006269	-	98	88.589	Amphiprion_ocellaris
ENSELUG00000020545	ddx61	100	86.885	ENSAPEG00000007293	ddx61	100	86.885	Amphiprion_percula
ENSELUG00000020545	ddx61	99	88.589	ENSAPEG00000020642	-	98	88.589	Amphiprion_percula
ENSELUG00000020545	ddx61	99	88.589	ENSAPEG00000021368	-	98	88.589	Amphiprion_percula
ENSELUG00000020545	ddx61	98	88.565	ENSATEG00000011302	ddx61	99	88.565	Anabas_testudineus
ENSELUG00000020545	ddx61	99	87.344	ENSATEG00000005424	-	98	87.344	Anabas_testudineus
ENSELUG00000020545	ddx61	98	88.679	ENSACLG00000027620	ddx61	99	88.679	Astatotilapia_calliptera
ENSELUG00000020545	ddx61	99	89.004	ENSACLG00000003260	-	99	89.004	Astatotilapia_calliptera
ENSELUG00000020545	ddx61	99	86.680	ENSAMXG00000033980	-	98	86.680	Astyanax_mexicanus
ENSELUG00000020545	ddx61	97	88.842	ENSAMXG00000032542	ddx61	98	88.333	Astyanax_mexicanus
ENSELUG00000020545	ddx61	99	88.981	ENSCSEG00000009893	-	98	88.981	Cynoglossus_semilaevis
ENSELUG00000020545	ddx61	99	87.759	ENSCVAG00000011006	-	98	87.759	Cyprinodon_variegatus
ENSELUG00000020545	ddx61	97	87.448	ENSDARG00000018425	ddx61	98	87.448	Danio_rerio
ENSELUG00000020545	ddx61	99	87.967	ENSFHEG00000015487	-	98	87.967	Fundulus_heteroclitus
ENSELUG00000020545	ddx61	97	89.937	ENSGMOG00000013762	ddx61	99	89.234	Gadus_morhua
ENSELUG00000020545	ddx61	66	85.933	ENSGMOG00000003561	-	100	86.626	Gadus_morhua
ENSELUG00000020545	ddx61	98	88.150	ENSGAFG00000015865	-	98	88.150	Gambusia_affinis
ENSELUG00000020545	ddx61	99	88.406	ENSGACG00000002413	-	99	88.406	Gasterosteus_aculeatus
ENSELUG00000020545	ddx61	98	86.912	ENSGACG00000003401	ddx61	99	86.912	Gasterosteus_aculeatus
ENSELUG00000020545	ddx61	99	89.004	ENSHBUG00000017033	-	99	89.004	Haplochromis_burtoni
ENSELUG00000020545	ddx61	98	88.889	ENSHBUG00000017832	ddx61	99	88.889	Haplochromis_burtoni
ENSELUG00000020545	ddx61	98	86.722	ENSHCOG00000012238	-	98	86.722	Hippocampus_comes
ENSELUG00000020545	ddx61	100	84.836	ENSHCOG00000008184	ddx61	100	84.836	Hippocampus_comes
ENSELUG00000020545	ddx61	97	87.131	ENSIPUG00000008367	-	99	86.848	Ictalurus_punctatus
ENSELUG00000020545	ddx61	96	86.469	ENSIPUG00000012823	DDX6	99	85.417	Ictalurus_punctatus
ENSELUG00000020545	ddx61	98	88.750	ENSKMAG00000007213	-	98	88.750	Kryptolebias_marmoratus
ENSELUG00000020545	ddx61	99	87.730	ENSLBEG00000016890	-	98	88.235	Labrus_bergylta
ENSELUG00000020545	ddx61	98	90.126	ENSLBEG00000001740	ddx61	99	90.126	Labrus_bergylta
ENSELUG00000020545	ddx61	98	83.471	ENSLACG00000015214	ddx61	100	83.471	Latimeria_chalumnae
ENSELUG00000020545	ddx61	96	48.822	ENSLOCG00000004352	ddx61	94	49.679	Lepisosteus_oculatus
ENSELUG00000020545	ddx61	98	89.397	ENSMAMG00000005559	-	98	89.397	Mastacembelus_armatus
ENSELUG00000020545	ddx61	100	87.705	ENSMAMG00000005321	ddx61	100	87.705	Mastacembelus_armatus
ENSELUG00000020545	ddx61	98	88.889	ENSMZEG00005003556	ddx61	99	88.889	Maylandia_zebra
ENSELUG00000020545	ddx61	99	89.004	ENSMZEG00005026268	-	99	89.004	Maylandia_zebra
ENSELUG00000020545	ddx61	97	87.473	ENSMMOG00000007415	ddx61	97	87.473	Mola_mola
ENSELUG00000020545	ddx61	98	88.073	ENSMMOG00000013694	-	98	88.073	Mola_mola
ENSELUG00000020545	ddx61	72	76.487	ENSMMOG00000008825	-	99	71.186	Mola_mola
ENSELUG00000020545	ddx61	97	76.618	ENSMALG00000013776	ddx61	96	76.618	Monopterus_albus
ENSELUG00000020545	ddx61	99	87.759	ENSMALG00000013817	-	98	87.759	Monopterus_albus
ENSELUG00000020545	ddx61	99	81.950	ENSNBRG00000015075	-	99	81.950	Neolamprologus_brichardi
ENSELUG00000020545	ddx61	97	82.105	ENSNBRG00000015800	ddx61	99	82.105	Neolamprologus_brichardi
ENSELUG00000020545	ddx61	97	88.842	ENSONIG00000011418	ddx61	99	88.842	Oreochromis_niloticus
ENSELUG00000020545	ddx61	99	89.212	ENSONIG00000013748	-	99	89.212	Oreochromis_niloticus
ENSELUG00000020545	ddx61	98	88.935	ENSORLG00000009178	-	98	88.935	Oryzias_latipes
ENSELUG00000020545	ddx61	98	88.935	ENSORLG00020015515	-	98	88.935	Oryzias_latipes_hni
ENSELUG00000020545	ddx61	98	88.935	ENSORLG00015006764	-	98	88.935	Oryzias_latipes_hsok
ENSELUG00000020545	ddx61	96	89.151	ENSOMEG00000022326	-	99	89.151	Oryzias_melastigma
ENSELUG00000020545	ddx61	97	91.176	ENSPKIG00000024264	ddx61	99	90.103	Paramormyrops_kingsleyae
ENSELUG00000020545	ddx61	98	81.628	ENSPMGG00000013355	-	98	81.628	Periophthalmus_magnuspinnatus
ENSELUG00000020545	ddx61	96	89.574	ENSPFOG00000005750	-	96	89.574	Poecilia_formosa
ENSELUG00000020545	ddx61	96	89.574	ENSPLAG00000000403	-	96	89.574	Poecilia_latipinna
ENSELUG00000020545	ddx61	98	88.703	ENSPMEG00000023737	-	98	88.703	Poecilia_mexicana
ENSELUG00000020545	ddx61	98	82.490	ENSPNYG00000015045	ddx61	99	82.490	Pundamilia_nyererei
ENSELUG00000020545	ddx61	99	89.004	ENSPNYG00000003986	-	99	89.004	Pundamilia_nyererei
ENSELUG00000020545	ddx61	98	88.174	ENSPNAG00000008742	-	98	88.174	Pygocentrus_nattereri
ENSELUG00000020545	ddx61	98	88.100	ENSPNAG00000024072	ddx61	99	88.100	Pygocentrus_nattereri
ENSELUG00000020545	ddx61	96	89.451	ENSSFOG00015021404	ddx61	98	88.454	Scleropages_formosus
ENSELUG00000020545	ddx61	100	86.680	ENSSMAG00000006591	ddx61	100	86.680	Scophthalmus_maximus
ENSELUG00000020545	ddx61	99	88.981	ENSSMAG00000001793	-	98	88.981	Scophthalmus_maximus
ENSELUG00000020545	ddx61	99	88.613	ENSSDUG00000007530	-	98	88.613	Seriola_dumerili
ENSELUG00000020545	ddx61	100	89.139	ENSSDUG00000009713	ddx61	100	89.139	Seriola_dumerili
ENSELUG00000020545	ddx61	99	88.613	ENSSLDG00000007608	-	98	88.613	Seriola_lalandi_dorsalis
ENSELUG00000020545	ddx61	100	89.344	ENSSLDG00000000132	ddx61	100	89.344	Seriola_lalandi_dorsalis
ENSELUG00000020545	ddx61	99	88.589	ENSSPAG00000013878	-	99	89.598	Stegastes_partitus
ENSELUG00000020545	ddx61	100	87.064	ENSSPAG00000001578	ddx61	100	87.064	Stegastes_partitus
ENSELUG00000020545	ddx61	99	87.552	ENSTRUG00000012432	-	98	87.552	Takifugu_rubripes
ENSELUG00000020545	ddx61	98	88.309	ENSTNIG00000003560	-	99	88.309	Tetraodon_nigroviridis
ENSELUG00000020545	ddx61	97	87.731	ENSXCOG00000001406	-	98	87.731	Xiphophorus_couchianus
ENSELUG00000020545	ddx61	98	88.358	ENSXMAG00000016090	-	98	88.358	Xiphophorus_maculatus