EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000020565 (Gene tree)
Gene ID: 105011971
Gene Symbol: swt1
Alias: si:dkeyp-11g8.2|si:dkeyp-11g8.4|wu:fb81g09
Full Name: SWT1%2C RNA endoribonuclease homolog
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 33991 bases
Position: chrLG08:30591947-30625937
Accession: 105011971
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000021496	PIN_4	PF13638.6	1.2e-30	1	1
ENSELUP00000021502	PIN_4	PF13638.6	1.4e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000032228	-	3392	XM_010872490	ENSELUP00000021502	1019 (aa)	XP_010870792	UPI000577431D
ENSELUT00000032192	-	3257	-	ENSELUP00000021496	974 (aa)	-	-

Gene Model

Click here to download ENSELUG00000020565's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000020565's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000020565	swt1	58	36.789	ENSG00000116668	SWT1	63	36.455	Homo_sapiens
ENSELUG00000020565	swt1	57	50.000	ENSAPOG00000014897	-	59	50.171	Acanthochromis_polyacanthus
ENSELUG00000020565	swt1	57	37.925	ENSAMEG00000013585	SWT1	62	37.669	Ailuropoda_melanoleuca
ENSELUG00000020565	swt1	56	51.712	ENSAOCG00000013932	swt1	59	51.712	Amphiprion_ocellaris
ENSELUG00000020565	swt1	56	51.712	ENSAPEG00000009613	-	59	51.712	Amphiprion_percula
ENSELUG00000020565	swt1	56	40.484	ENSAPLG00000008607	SWT1	75	39.619	Anas_platyrhynchos
ENSELUG00000020565	swt1	56	35.678	ENSACAG00000002276	SWT1	64	35.678	Anolis_carolinensis
ENSELUG00000020565	swt1	58	36.957	ENSANAG00000027068	SWT1	63	36.957	Aotus_nancymaae
ENSELUG00000020565	swt1	53	52.622	ENSACLG00000009742	swt1	67	52.087	Astatotilapia_calliptera
ENSELUG00000020565	swt1	77	44.848	ENSAMXG00000010971	swt1	78	45.499	Astyanax_mexicanus
ENSELUG00000020565	swt1	58	36.455	ENSCJAG00000005544	SWT1	63	36.288	Callithrix_jacchus
ENSELUG00000020565	swt1	57	36.457	ENSCAFG00000013543	SWT1	63	35.889	Canis_familiaris
ENSELUG00000020565	swt1	57	36.457	ENSCAFG00020015648	SWT1	65	35.945	Canis_lupus_dingo
ENSELUG00000020565	swt1	58	36.895	ENSCHIG00000023511	SWT1	95	36.471	Capra_hircus
ENSELUG00000020565	swt1	57	36.797	ENSTSYG00000010470	SWT1	62	36.286	Carlito_syrichta
ENSELUG00000020565	swt1	52	35.490	ENSCPOG00000014251	SWT1	63	35.675	Cavia_porcellus
ENSELUG00000020565	swt1	58	37.209	ENSCCAG00000033926	SWT1	63	36.789	Cebus_capucinus
ENSELUG00000020565	swt1	60	37.138	ENSCATG00000042210	SWT1	95	37.225	Cercocebus_atys
ENSELUG00000020565	swt1	58	35.821	ENSCLAG00000013959	SWT1	64	35.489	Chinchilla_lanigera
ENSELUG00000020565	swt1	60	36.859	ENSCSAG00000012895	SWT1	65	36.538	Chlorocebus_sabaeus
ENSELUG00000020565	swt1	57	41.077	ENSCPBG00000015691	SWT1	62	41.077	Chrysemys_picta_bellii
ENSELUG00000020565	swt1	58	37.458	ENSCANG00000032207	SWT1	95	37.138	Colobus_angolensis_palliatus
ENSELUG00000020565	swt1	67	35.447	ENSCGRG00001022955	Swt1	72	34.870	Cricetulus_griseus_chok1gshd
ENSELUG00000020565	swt1	57	37.415	ENSCGRG00000010224	Swt1	62	36.735	Cricetulus_griseus_crigri
ENSELUG00000020565	swt1	63	48.636	ENSCSEG00000017352	swt1	96	44.166	Cynoglossus_semilaevis
ENSELUG00000020565	swt1	56	52.604	ENSDARG00000094010	swt1	57	52.257	Danio_rerio
ENSELUG00000020565	swt1	51	35.953	ENSDNOG00000005254	SWT1	58	35.560	Dasypus_novemcinctus
ENSELUG00000020565	swt1	56	36.724	ENSDORG00000010531	Swt1	65	36.897	Dipodomys_ordii
ENSELUG00000020565	swt1	58	36.484	ENSEASG00005005530	SWT1	67	36.153	Equus_asinus_asinus
ENSELUG00000020565	swt1	58	35.559	ENSECAG00000012085	SWT1	67	35.225	Equus_caballus
ENSELUG00000020565	swt1	56	37.069	ENSFCAG00000011286	SWT1	61	37.069	Felis_catus
ENSELUG00000020565	swt1	56	39.451	ENSFALG00000003206	SWT1	62	38.803	Ficedula_albicollis
ENSELUG00000020565	swt1	58	36.545	ENSFDAG00000007569	SWT1	64	36.273	Fukomys_damarensis
ENSELUG00000020565	swt1	56	39.966	ENSGALG00000034230	SWT1	64	39.153	Gallus_gallus
ENSELUG00000020565	swt1	55	51.211	ENSGAFG00000007803	-	59	50.086	Gambusia_affinis
ENSELUG00000020565	swt1	57	39.691	ENSGAGG00000025050	SWT1	96	39.966	Gopherus_agassizii
ENSELUG00000020565	swt1	53	36.577	ENSGGOG00000041167	-	95	36.036	Gorilla_gorilla
ENSELUG00000020565	swt1	56	51.979	ENSHBUG00000006188	swt1	67	51.468	Haplochromis_burtoni
ENSELUG00000020565	swt1	58	37.583	ENSHGLG00000006542	SWT1	67	37.167	Heterocephalus_glaber_female
ENSELUG00000020565	swt1	58	37.583	ENSHGLG00100014408	SWT1	65	37.167	Heterocephalus_glaber_male
ENSELUG00000020565	swt1	77	44.689	ENSIPUG00000009113	-	81	44.702	Ictalurus_punctatus
ENSELUG00000020565	swt1	58	36.789	ENSSTOG00000010356	SWT1	64	36.622	Ictidomys_tridecemlineatus
ENSELUG00000020565	swt1	56	36.806	ENSJJAG00000015927	Swt1	63	36.458	Jaculus_jaculus
ENSELUG00000020565	swt1	61	47.450	ENSKMAG00000012533	swt1	65	47.132	Kryptolebias_marmoratus
ENSELUG00000020565	swt1	57	51.946	ENSLBEG00000020663	-	59	50.671	Labrus_bergylta
ENSELUG00000020565	swt1	56	40.657	ENSLACG00000009194	SWT1	80	40.311	Latimeria_chalumnae
ENSELUG00000020565	swt1	56	48.328	ENSLOCG00000001749	swt1	100	46.794	Lepisosteus_oculatus
ENSELUG00000020565	swt1	57	35.738	ENSLAFG00000004346	-	96	35.738	Loxodonta_africana
ENSELUG00000020565	swt1	60	36.656	ENSMFAG00000031793	SWT1	96	36.887	Macaca_fascicularis
ENSELUG00000020565	swt1	57	36.532	ENSMMUG00000013882	SWT1	95	35.871	Macaca_mulatta
ENSELUG00000020565	swt1	60	36.656	ENSMNEG00000035502	SWT1	96	37.056	Macaca_nemestrina
ENSELUG00000020565	swt1	60	37.621	ENSMLEG00000038692	SWT1	95	37.500	Mandrillus_leucophaeus
ENSELUG00000020565	swt1	56	51.979	ENSMZEG00005018489	swt1	67	51.468	Maylandia_zebra
ENSELUG00000020565	swt1	55	40.240	ENSMGAG00000000973	SWT1	94	38.908	Meleagris_gallopavo
ENSELUG00000020565	swt1	57	34.828	ENSMAUG00000007996	Swt1	59	34.664	Mesocricetus_auratus
ENSELUG00000020565	swt1	58	36.772	ENSMICG00000014975	SWT1	63	36.772	Microcebus_murinus
ENSELUG00000020565	swt1	57	37.649	ENSMOCG00000009776	Swt1	61	37.138	Microtus_ochrogaster
ENSELUG00000020565	swt1	84	31.665	ENSMODG00000007472	SWT1	87	32.160	Monodelphis_domestica
ENSELUG00000020565	swt1	56	52.348	ENSMALG00000019308	swt1	58	51.903	Monopterus_albus
ENSELUG00000020565	swt1	57	37.245	MGP_CAROLIEiJ_G0014692	Swt1	90	42.291	Mus_caroli
ENSELUG00000020565	swt1	57	37.733	ENSMUSG00000052748	Swt1	90	43.172	Mus_musculus
ENSELUG00000020565	swt1	57	37.437	MGP_PahariEiJ_G0027928	Swt1	80	45.098	Mus_pahari
ENSELUG00000020565	swt1	57	37.521	MGP_SPRETEiJ_G0015499	Swt1	90	43.172	Mus_spretus
ENSELUG00000020565	swt1	58	36.833	ENSMPUG00000011913	SWT1	63	36.833	Mustela_putorius_furo
ENSELUG00000020565	swt1	56	37.500	ENSMLUG00000001142	SWT1	60	37.326	Myotis_lucifugus
ENSELUG00000020565	swt1	56	37.782	ENSNGAG00000021080	Swt1	60	37.608	Nannospalax_galili
ENSELUG00000020565	swt1	58	37.960	ENSNLEG00000018031	SWT1	63	37.625	Nomascus_leucogenys
ENSELUG00000020565	swt1	57	49.918	ENSONIG00000009994	swt1	97	48.837	Oreochromis_niloticus
ENSELUG00000020565	swt1	70	33.650	ENSOANG00000001013	-	89	32.895	Ornithorhynchus_anatinus
ENSELUG00000020565	swt1	57	36.905	ENSOCUG00000004901	SWT1	63	36.672	Oryctolagus_cuniculus
ENSELUG00000020565	swt1	61	48.062	ENSORLG00000009682	swt1	65	47.582	Oryzias_latipes
ENSELUG00000020565	swt1	99	37.055	ENSORLG00020011654	swt1	98	36.574	Oryzias_latipes_hni
ENSELUG00000020565	swt1	61	47.907	ENSORLG00015007734	swt1	66	47.278	Oryzias_latipes_hsok
ENSELUG00000020565	swt1	58	49.668	ENSOMEG00000006607	swt1	59	49.331	Oryzias_melastigma
ENSELUG00000020565	swt1	58	36.938	ENSOGAG00000016195	SWT1	63	36.439	Otolemur_garnettii
ENSELUG00000020565	swt1	58	36.895	ENSOARG00000004156	SWT1	62	36.561	Ovis_aries
ENSELUG00000020565	swt1	58	36.789	ENSPPAG00000021400	SWT1	63	36.455	Pan_paniscus
ENSELUG00000020565	swt1	56	37.094	ENSPPRG00000023754	SWT1	61	37.094	Panthera_pardus
ENSELUG00000020565	swt1	56	37.094	ENSPTIG00000021889	SWT1	61	37.094	Panthera_tigris_altaica
ENSELUG00000020565	swt1	58	37.124	ENSPTRG00000001777	SWT1	63	36.622	Pan_troglodytes
ENSELUG00000020565	swt1	60	36.656	ENSPANG00000005099	SWT1	95	37.099	Papio_anubis
ENSELUG00000020565	swt1	77	44.691	ENSPKIG00000005979	swt1	79	44.074	Paramormyrops_kingsleyae
ENSELUG00000020565	swt1	57	40.401	ENSPSIG00000008961	SWT1	62	39.369	Pelodiscus_sinensis
ENSELUG00000020565	swt1	57	37.649	ENSPEMG00000008208	Swt1	61	37.138	Peromyscus_maniculatus_bairdii
ENSELUG00000020565	swt1	56	37.037	ENSPCIG00000002443	SWT1	61	37.037	Phascolarctos_cinereus
ENSELUG00000020565	swt1	56	49.660	ENSPFOG00000010988	-	70	47.430	Poecilia_formosa
ENSELUG00000020565	swt1	56	49.830	ENSPLAG00000022908	-	59	49.915	Poecilia_latipinna
ENSELUG00000020565	swt1	56	49.660	ENSPMEG00000006943	-	59	49.402	Poecilia_mexicana
ENSELUG00000020565	swt1	58	37.438	ENSPPYG00000000415	SWT1	63	37.730	Pongo_abelii
ENSELUG00000020565	swt1	57	34.175	ENSPVAG00000005968	SWT1	63	34.551	Pteropus_vampyrus
ENSELUG00000020565	swt1	56	51.979	ENSPNYG00000012934	swt1	67	51.468	Pundamilia_nyererei
ENSELUG00000020565	swt1	83	45.434	ENSPNAG00000017795	swt1	83	45.423	Pygocentrus_nattereri
ENSELUG00000020565	swt1	57	37.879	ENSRNOG00000032258	Swt1	64	37.584	Rattus_norvegicus
ENSELUG00000020565	swt1	58	36.913	ENSRBIG00000040630	SWT1	95	36.581	Rhinopithecus_bieti
ENSELUG00000020565	swt1	58	37.209	ENSSBOG00000028825	SWT1	62	36.789	Saimiri_boliviensis_boliviensis
ENSELUG00000020565	swt1	62	37.209	ENSSHAG00000009241	SWT1	66	37.209	Sarcophilus_harrisii
ENSELUG00000020565	swt1	93	41.572	ENSSFOG00015004895	swt1	92	40.829	Scleropages_formosus
ENSELUG00000020565	swt1	65	48.983	ENSSMAG00000020761	-	53	49.046	Scophthalmus_maximus
ENSELUG00000020565	swt1	98	40.622	ENSSDUG00000012345	swt1	98	40.344	Seriola_dumerili
ENSELUG00000020565	swt1	57	53.445	ENSSLDG00000003821	swt1	59	52.971	Seriola_lalandi_dorsalis
ENSELUG00000020565	swt1	57	39.832	ENSSPUG00000003899	SWT1	61	39.160	Sphenodon_punctatus
ENSELUG00000020565	swt1	56	52.686	ENSSPAG00000001030	swt1	59	51.993	Stegastes_partitus
ENSELUG00000020565	swt1	58	36.711	ENSSSCG00000015569	SWT1	64	36.877	Sus_scrofa
ENSELUG00000020565	swt1	55	38.772	ENSTGUG00000003718	-	98	38.772	Taeniopygia_guttata
ENSELUG00000020565	swt1	55	50.532	ENSTRUG00000006420	swt1	60	50.264	Takifugu_rubripes
ENSELUG00000020565	swt1	58	36.227	ENSTTRG00000005914	SWT1	63	35.809	Tursiops_truncatus
ENSELUG00000020565	swt1	58	37.667	ENSUAMG00000020937	SWT1	68	37.417	Ursus_americanus
ENSELUG00000020565	swt1	58	37.748	ENSUMAG00000021918	SWT1	64	37.329	Ursus_maritimus
ENSELUG00000020565	swt1	50	41.053	ENSVPAG00000011855	SWT1	55	41.053	Vicugna_pacos
ENSELUG00000020565	swt1	57	36.457	ENSVVUG00000009182	SWT1	64	35.945	Vulpes_vulpes
ENSELUG00000020565	swt1	56	52.062	ENSXMAG00000023472	-	60	50.761	Xiphophorus_maculatus