EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000020593 (Gene tree)
Gene ID: 105012976
Gene Symbol: ddx42
Alias: im:7148194|si:dkey-15n1.10|zgc:111815
Full Name: DEAD-box helicase 42
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 8958 bases
Position: chrLG11:26115856-26124813
Accession: 105012976
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000021487	ResIII	PF04851.15	2.5e-06	1	1
ENSELUP00000021471	ResIII	PF04851.15	2.6e-06	1	1
ENSELUP00000021471	DEAD	PF00270.29	5.2e-48	1	1
ENSELUP00000021487	DEAD	PF00270.29	5.2e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000032150	-	2724	XM_013135895	ENSELUP00000021471	907 (aa)	XP_012991349	-
ENSELUT00000032179	-	4066	XM_013135894	ENSELUP00000021487	923 (aa)	XP_012991348	UPI000661E8B7

Gene Model

Click here to download ENSELUG00000020593's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000020593's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000020593	ddx42	50	35.556	ENSELUG00000023518	-	69	35.560
ENSELUG00000020593	ddx42	55	43.738	ENSELUG00000000817	ddx46	51	43.738

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000020593	ddx42	100	70.126	ENSG00000198231	DDX42	98	76.096	Homo_sapiens
ENSELUG00000020593	ddx42	91	84.834	ENSAPOG00000017675	ddx42	99	82.986	Acanthochromis_polyacanthus
ENSELUG00000020593	ddx42	100	70.262	ENSAMEG00000003200	DDX42	100	69.511	Ailuropoda_melanoleuca
ENSELUG00000020593	ddx42	85	79.167	ENSACIG00000007376	ddx42	99	81.187	Amphilophus_citrinellus
ENSELUG00000020593	ddx42	100	80.342	ENSAOCG00000003520	ddx42	100	81.972	Amphiprion_ocellaris
ENSELUG00000020593	ddx42	100	80.256	ENSAPEG00000000984	ddx42	100	82.215	Amphiprion_percula
ENSELUG00000020593	ddx42	100	79.663	ENSATEG00000022920	ddx42	100	80.806	Anabas_testudineus
ENSELUG00000020593	ddx42	100	70.032	ENSAPLG00000010544	DDX42	99	70.545	Anas_platyrhynchos
ENSELUG00000020593	ddx42	99	71.338	ENSACAG00000003994	DDX42	99	70.308	Anolis_carolinensis
ENSELUG00000020593	ddx42	100	71.097	ENSANAG00000035693	DDX42	96	76.513	Aotus_nancymaae
ENSELUG00000020593	ddx42	91	84.024	ENSACLG00000025113	ddx42	100	80.871	Astatotilapia_calliptera
ENSELUG00000020593	ddx42	87	79.401	ENSAMXG00000011435	ddx42	100	76.694	Astyanax_mexicanus
ENSELUG00000020593	ddx42	100	69.348	ENSBTAG00000021058	DDX42	94	76.324	Bos_taurus
ENSELUG00000020593	ddx42	64	52.590	WBGene00008119	C46F11.4	87	48.686	Caenorhabditis_elegans
ENSELUG00000020593	ddx42	99	71.036	ENSCJAG00000019649	DDX42	98	79.450	Callithrix_jacchus
ENSELUG00000020593	ddx42	100	70.483	ENSCAFG00000012818	DDX42	100	70.211	Canis_familiaris
ENSELUG00000020593	ddx42	100	70.483	ENSCAFG00020026631	DDX42	100	70.211	Canis_lupus_dingo
ENSELUG00000020593	ddx42	100	70.276	ENSCHIG00000014431	DDX42	100	71.261	Capra_hircus
ENSELUG00000020593	ddx42	100	70.188	ENSTSYG00000001380	DDX42	100	70.273	Carlito_syrichta
ENSELUG00000020593	ddx42	73	59.329	ENSCAPG00000013621	DDX42	94	59.416	Cavia_aperea
ENSELUG00000020593	ddx42	100	70.675	ENSCPOG00000005633	DDX42	100	70.074	Cavia_porcellus
ENSELUG00000020593	ddx42	100	67.019	ENSCCAG00000020612	DDX42	94	76.934	Cebus_capucinus
ENSELUG00000020593	ddx42	100	70.886	ENSCATG00000030490	DDX42	100	70.222	Cercocebus_atys
ENSELUG00000020593	ddx42	100	70.768	ENSCLAG00000003497	DDX42	100	69.937	Chinchilla_lanigera
ENSELUG00000020593	ddx42	100	67.016	ENSCSAG00000003914	DDX42	100	66.353	Chlorocebus_sabaeus
ENSELUG00000020593	ddx42	62	83.929	ENSCHOG00000006241	DDX42	73	83.929	Choloepus_hoffmanni
ENSELUG00000020593	ddx42	99	69.615	ENSCPBG00000026682	DDX42	99	69.719	Chrysemys_picta_bellii
ENSELUG00000020593	ddx42	100	70.886	ENSCANG00000034663	DDX42	93	79.819	Colobus_angolensis_palliatus
ENSELUG00000020593	ddx42	100	71.217	ENSCGRG00001009775	Ddx42	100	70.794	Cricetulus_griseus_chok1gshd
ENSELUG00000020593	ddx42	100	71.217	ENSCGRG00000011718	Ddx42	100	70.794	Cricetulus_griseus_crigri
ENSELUG00000020593	ddx42	92	80.494	ENSCSEG00000021574	ddx42	97	78.070	Cynoglossus_semilaevis
ENSELUG00000020593	ddx42	100	78.088	ENSCVAG00000011404	ddx42	100	79.336	Cyprinodon_variegatus
ENSELUG00000020593	ddx42	100	77.603	ENSDARG00000037928	ddx42	100	78.413	Danio_rerio
ENSELUG00000020593	ddx42	100	67.925	ENSDNOG00000007961	DDX42	100	68.665	Dasypus_novemcinctus
ENSELUG00000020593	ddx42	100	64.421	ENSDORG00000004199	Ddx42	100	63.417	Dipodomys_ordii
ENSELUG00000020593	ddx42	66	60.841	FBgn0036104	CG6418	84	58.771	Drosophila_melanogaster
ENSELUG00000020593	ddx42	81	71.863	ENSEBUG00000001155	ddx42	88	72.840	Eptatretus_burgeri
ENSELUG00000020593	ddx42	100	70.632	ENSEASG00005013089	DDX42	89	81.377	Equus_asinus_asinus
ENSELUG00000020593	ddx42	100	68.926	ENSECAG00000022684	DDX42	100	70.211	Equus_caballus
ENSELUG00000020593	ddx42	58	83.784	ENSEEUG00000009144	DDX42	73	83.784	Erinaceus_europaeus
ENSELUG00000020593	ddx42	100	69.543	ENSFCAG00000003499	DDX42	100	70.242	Felis_catus
ENSELUG00000020593	ddx42	89	75.300	ENSFALG00000004675	DDX42	73	75.180	Ficedula_albicollis
ENSELUG00000020593	ddx42	100	70.347	ENSFDAG00000020516	DDX42	100	69.624	Fukomys_damarensis
ENSELUG00000020593	ddx42	100	78.587	ENSFHEG00000023290	ddx42	100	79.616	Fundulus_heteroclitus
ENSELUG00000020593	ddx42	76	83.921	ENSGMOG00000004595	ddx42	88	82.934	Gadus_morhua
ENSELUG00000020593	ddx42	100	69.552	ENSGALG00000000581	DDX42	100	69.864	Gallus_gallus
ENSELUG00000020593	ddx42	93	80.641	ENSGAFG00000011846	ddx42	97	80.795	Gambusia_affinis
ENSELUG00000020593	ddx42	100	74.652	ENSGACG00000009782	ddx42	100	74.386	Gasterosteus_aculeatus
ENSELUG00000020593	ddx42	100	70.000	ENSGAGG00000024411	DDX42	99	69.583	Gopherus_agassizii
ENSELUG00000020593	ddx42	100	70.855	ENSGGOG00000006779	DDX42	95	76.778	Gorilla_gorilla
ENSELUG00000020593	ddx42	91	83.905	ENSHBUG00000008705	ddx42	100	80.765	Haplochromis_burtoni
ENSELUG00000020593	ddx42	99	68.958	ENSHGLG00000010024	DDX42	100	67.732	Heterocephalus_glaber_female
ENSELUG00000020593	ddx42	93	53.925	ENSHGLG00100007138	-	95	53.864	Heterocephalus_glaber_male
ENSELUG00000020593	ddx42	100	70.262	ENSHGLG00100004479	-	100	69.543	Heterocephalus_glaber_male
ENSELUG00000020593	ddx42	100	73.679	ENSHCOG00000003357	ddx42	100	75.270	Hippocampus_comes
ENSELUG00000020593	ddx42	100	77.350	ENSIPUG00000013327	ddx42	100	78.122	Ictalurus_punctatus
ENSELUG00000020593	ddx42	100	70.397	ENSSTOG00000008922	DDX42	100	70.137	Ictidomys_tridecemlineatus
ENSELUG00000020593	ddx42	100	70.957	ENSJJAG00000011727	Ddx42	100	70.011	Jaculus_jaculus
ENSELUG00000020593	ddx42	100	78.981	ENSKMAG00000009914	ddx42	100	81.018	Kryptolebias_marmoratus
ENSELUG00000020593	ddx42	100	72.299	ENSLBEG00000004687	ddx42	100	73.235	Labrus_bergylta
ENSELUG00000020593	ddx42	99	71.290	ENSLACG00000013476	DDX42	97	72.180	Latimeria_chalumnae
ENSELUG00000020593	ddx42	100	79.296	ENSLOCG00000011764	ddx42	100	79.211	Lepisosteus_oculatus
ENSELUG00000020593	ddx42	100	70.626	ENSLAFG00000003249	DDX42	100	70.706	Loxodonta_africana
ENSELUG00000020593	ddx42	100	70.886	ENSMFAG00000031356	DDX42	100	70.222	Macaca_fascicularis
ENSELUG00000020593	ddx42	100	70.886	ENSMMUG00000016762	DDX42	100	70.148	Macaca_mulatta
ENSELUG00000020593	ddx42	100	70.886	ENSMNEG00000038250	DDX42	100	70.222	Macaca_nemestrina
ENSELUG00000020593	ddx42	100	70.157	ENSMLEG00000043080	DDX42	100	69.780	Mandrillus_leucophaeus
ENSELUG00000020593	ddx42	91	83.234	ENSMAMG00000021888	ddx42	98	80.361	Mastacembelus_armatus
ENSELUG00000020593	ddx42	91	84.024	ENSMZEG00005023103	ddx42	100	80.871	Maylandia_zebra
ENSELUG00000020593	ddx42	100	69.637	ENSMGAG00000001822	DDX42	100	69.864	Meleagris_gallopavo
ENSELUG00000020593	ddx42	76	76.783	ENSMAUG00000020774	-	92	77.089	Mesocricetus_auratus
ENSELUG00000020593	ddx42	100	70.582	ENSMICG00000009952	DDX42	100	69.611	Microcebus_murinus
ENSELUG00000020593	ddx42	99	70.127	ENSMOCG00000015504	Ddx42	99	70.021	Microtus_ochrogaster
ENSELUG00000020593	ddx42	90	80.502	ENSMMOG00000016963	ddx42	88	79.695	Mola_mola
ENSELUG00000020593	ddx42	50	81.316	ENSMODG00000009917	-	98	80.255	Monodelphis_domestica
ENSELUG00000020593	ddx42	100	79.721	ENSMALG00000007800	ddx42	100	80.193	Monopterus_albus
ENSELUG00000020593	ddx42	99	71.005	MGP_CAROLIEiJ_G0017314	Ddx42	99	70.231	Mus_caroli
ENSELUG00000020593	ddx42	99	70.899	ENSMUSG00000020705	Ddx42	100	70.052	Mus_musculus
ENSELUG00000020593	ddx42	73	83.013	MGP_PahariEiJ_G0018444	-	96	81.818	Mus_pahari
ENSELUG00000020593	ddx42	99	70.899	MGP_SPRETEiJ_G0018158	Ddx42	100	70.052	Mus_spretus
ENSELUG00000020593	ddx42	100	68.427	ENSMPUG00000014921	DDX42	100	69.801	Mustela_putorius_furo
ENSELUG00000020593	ddx42	100	67.930	ENSMLUG00000011645	DDX42	100	68.815	Myotis_lucifugus
ENSELUG00000020593	ddx42	99	70.570	ENSNGAG00000021897	Ddx42	100	70.347	Nannospalax_galili
ENSELUG00000020593	ddx42	91	82.206	ENSNBRG00000004466	ddx42	100	80.151	Neolamprologus_brichardi
ENSELUG00000020593	ddx42	100	71.097	ENSNLEG00000004248	DDX42	97	76.812	Nomascus_leucogenys
ENSELUG00000020593	ddx42	76	70.840	ENSMEUG00000013227	-	82	70.996	Notamacropus_eugenii
ENSELUG00000020593	ddx42	100	70.105	ENSOPRG00000014960	DDX42	100	70.409	Ochotona_princeps
ENSELUG00000020593	ddx42	100	67.542	ENSODEG00000007810	DDX42	100	66.736	Octodon_degus
ENSELUG00000020593	ddx42	91	83.669	ENSONIG00000000734	ddx42	100	80.553	Oreochromis_niloticus
ENSELUG00000020593	ddx42	58	81.852	ENSOANG00000000265	DDX42	100	80.926	Ornithorhynchus_anatinus
ENSELUG00000020593	ddx42	95	71.287	ENSOCUG00000004304	DDX42	86	71.605	Oryctolagus_cuniculus
ENSELUG00000020593	ddx42	100	78.930	ENSORLG00000002395	ddx42	100	78.105	Oryzias_latipes
ENSELUG00000020593	ddx42	100	78.205	ENSORLG00020011621	ddx42	100	79.274	Oryzias_latipes_hni
ENSELUG00000020593	ddx42	100	77.802	ENSORLG00015004487	ddx42	100	78.953	Oryzias_latipes_hsok
ENSELUG00000020593	ddx42	100	79.189	ENSOMEG00000020093	ddx42	100	79.296	Oryzias_melastigma
ENSELUG00000020593	ddx42	100	70.312	ENSOGAG00000006872	DDX42	100	70.126	Otolemur_garnettii
ENSELUG00000020593	ddx42	100	68.627	ENSOARG00000013540	DDX42	100	69.731	Ovis_aries
ENSELUG00000020593	ddx42	100	70.886	ENSPPAG00000007496	DDX42	98	74.221	Pan_paniscus
ENSELUG00000020593	ddx42	100	69.615	ENSPPRG00000002740	DDX42	100	70.316	Panthera_pardus
ENSELUG00000020593	ddx42	100	68.717	ENSPTIG00000009932	DDX42	100	70.316	Panthera_tigris_altaica
ENSELUG00000020593	ddx42	100	70.886	ENSPTRG00000009523	DDX42	98	74.221	Pan_troglodytes
ENSELUG00000020593	ddx42	100	70.992	ENSPANG00000020990	DDX42	100	70.327	Papio_anubis
ENSELUG00000020593	ddx42	100	77.063	ENSPKIG00000002901	ddx42	100	78.075	Paramormyrops_kingsleyae
ENSELUG00000020593	ddx42	86	77.556	ENSPSIG00000010289	DDX42	95	77.947	Pelodiscus_sinensis
ENSELUG00000020593	ddx42	92	77.778	ENSPMGG00000009323	ddx42	100	75.188	Periophthalmus_magnuspinnatus
ENSELUG00000020593	ddx42	100	70.632	ENSPEMG00000006755	Ddx42	100	70.115	Peromyscus_maniculatus_bairdii
ENSELUG00000020593	ddx42	81	70.481	ENSPMAG00000005580	ddx42	99	70.312	Petromyzon_marinus
ENSELUG00000020593	ddx42	100	69.407	ENSPCIG00000009093	DDX42	100	69.199	Phascolarctos_cinereus
ENSELUG00000020593	ddx42	100	78.662	ENSPFOG00000014104	ddx42	100	80.655	Poecilia_formosa
ENSELUG00000020593	ddx42	100	78.450	ENSPLAG00000010522	ddx42	100	80.444	Poecilia_latipinna
ENSELUG00000020593	ddx42	100	77.684	ENSPMEG00000010744	ddx42	100	79.979	Poecilia_mexicana
ENSELUG00000020593	ddx42	100	77.871	ENSPREG00000009926	ddx42	100	79.002	Poecilia_reticulata
ENSELUG00000020593	ddx42	100	68.125	ENSPPYG00000008531	DDX42	100	67.883	Pongo_abelii
ENSELUG00000020593	ddx42	92	64.779	ENSPCAG00000002474	DDX42	100	65.829	Procavia_capensis
ENSELUG00000020593	ddx42	99	61.595	ENSPCOG00000001559	DDX42	90	73.125	Propithecus_coquereli
ENSELUG00000020593	ddx42	100	67.427	ENSPVAG00000000160	DDX42	100	68.139	Pteropus_vampyrus
ENSELUG00000020593	ddx42	75	82.260	ENSPNYG00000013954	ddx42	97	79.471	Pundamilia_nyererei
ENSELUG00000020593	ddx42	97	75.928	ENSPNAG00000017352	ddx42	100	78.157	Pygocentrus_nattereri
ENSELUG00000020593	ddx42	100	70.930	ENSRNOG00000009474	Ddx42	100	70.825	Rattus_norvegicus
ENSELUG00000020593	ddx42	100	70.886	ENSRBIG00000004781	DDX42	93	79.819	Rhinopithecus_bieti
ENSELUG00000020593	ddx42	100	70.886	ENSRROG00000029794	DDX42	100	70.222	Rhinopithecus_roxellana
ENSELUG00000020593	ddx42	100	70.409	ENSSBOG00000029624	DDX42	95	76.633	Saimiri_boliviensis_boliviensis
ENSELUG00000020593	ddx42	72	48.382	ENSSHAG00000007919	-	99	48.235	Sarcophilus_harrisii
ENSELUG00000020593	ddx42	100	69.665	ENSSHAG00000012896	-	100	69.456	Sarcophilus_harrisii
ENSELUG00000020593	ddx42	84	85.038	ENSSFOG00015014064	ddx42	83	84.143	Scleropages_formosus
ENSELUG00000020593	ddx42	100	78.701	ENSSMAG00000009077	ddx42	100	80.491	Scophthalmus_maximus
ENSELUG00000020593	ddx42	100	79.831	ENSSDUG00000022221	ddx42	100	80.892	Seriola_dumerili
ENSELUG00000020593	ddx42	100	79.233	ENSSLDG00000018483	ddx42	100	79.979	Seriola_lalandi_dorsalis
ENSELUG00000020593	ddx42	100	69.767	ENSSARG00000009847	DDX42	100	69.726	Sorex_araneus
ENSELUG00000020593	ddx42	99	70.632	ENSSPUG00000018806	DDX42	99	70.594	Sphenodon_punctatus
ENSELUG00000020593	ddx42	91	84.242	ENSSPAG00000013055	ddx42	100	81.296	Stegastes_partitus
ENSELUG00000020593	ddx42	85	69.082	ENSSSCG00000017289	DDX42	97	70.013	Sus_scrofa
ENSELUG00000020593	ddx42	100	71.081	ENSTGUG00000001931	DDX42	100	70.551	Taeniopygia_guttata
ENSELUG00000020593	ddx42	100	76.432	ENSTRUG00000010711	ddx42	99	85.491	Takifugu_rubripes
ENSELUG00000020593	ddx42	82	75.425	ENSTBEG00000010159	DDX42	100	74.379	Tupaia_belangeri
ENSELUG00000020593	ddx42	100	69.615	ENSTTRG00000006962	DDX42	100	70.074	Tursiops_truncatus
ENSELUG00000020593	ddx42	100	70.157	ENSUAMG00000007321	DDX42	100	69.511	Ursus_americanus
ENSELUG00000020593	ddx42	100	70.063	ENSUMAG00000017438	DDX42	100	69.488	Ursus_maritimus
ENSELUG00000020593	ddx42	94	69.231	ENSVPAG00000009633	DDX42	92	67.939	Vicugna_pacos
ENSELUG00000020593	ddx42	100	69.697	ENSVVUG00000006095	DDX42	100	70.316	Vulpes_vulpes
ENSELUG00000020593	ddx42	100	71.369	ENSXETG00000003245	ddx42	100	71.324	Xenopus_tropicalis
ENSELUG00000020593	ddx42	85	79.771	ENSXCOG00000017560	ddx42	97	81.091	Xiphophorus_couchianus
ENSELUG00000020593	ddx42	100	79.763	ENSXMAG00000008138	ddx42	100	81.116	Xiphophorus_maculatus