EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000020602 (Gene tree)
Gene ID: 105022225
Gene Symbol: rbm28
Alias: zgc:56258
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 10202 bases
Position: chrLG19:20887318-20897519
Accession: 105022225
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000021543	RRM_1	PF00076.22	2e-58	1	4
ENSELUP00000021543	RRM_1	PF00076.22	2e-58	2	4
ENSELUP00000021543	RRM_1	PF00076.22	2e-58	3	4
ENSELUP00000021543	RRM_1	PF00076.22	2e-58	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000032241	-	3914	XM_010890465	ENSELUP00000021543	779 (aa)	XP_010888767	UPI0005780706

Gene Model

Click here to download ENSELUG00000020602's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000020602's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000020602	rbm28	100	52.399	ENSG00000106344	RBM28	100	62.500	Homo_sapiens
ENSELUG00000020602	rbm28	58	65.646	ENSAPOG00000015512	rbm28	100	57.442	Acanthochromis_polyacanthus
ENSELUG00000020602	rbm28	96	60.494	ENSAMEG00000004776	RBM28	64	58.974	Ailuropoda_melanoleuca
ENSELUG00000020602	rbm28	57	61.851	ENSACIG00000023153	rbm28	91	61.851	Amphilophus_citrinellus
ENSELUG00000020602	rbm28	58	65.864	ENSAOCG00000000462	rbm28	100	58.744	Amphiprion_ocellaris
ENSELUG00000020602	rbm28	58	65.646	ENSAPEG00000012996	rbm28	100	58.025	Amphiprion_percula
ENSELUG00000020602	rbm28	59	56.504	ENSATEG00000001672	rbm28	100	52.534	Anabas_testudineus
ENSELUG00000020602	rbm28	90	62.500	ENSANAG00000033922	RBM28	100	62.500	Aotus_nancymaae
ENSELUG00000020602	rbm28	100	57.935	ENSACLG00000025024	rbm28	100	59.339	Astatotilapia_calliptera
ENSELUG00000020602	rbm28	59	60.390	ENSAMXG00000000763	rbm28	99	60.823	Astyanax_mexicanus
ENSELUG00000020602	rbm28	74	62.500	ENSBTAG00000017001	RBM28	100	62.500	Bos_taurus
ENSELUG00000020602	rbm28	100	51.064	ENSCJAG00000017731	RBM28	84	62.500	Callithrix_jacchus
ENSELUG00000020602	rbm28	100	52.718	ENSCAFG00000001667	RBM28	100	51.690	Canis_familiaris
ENSELUG00000020602	rbm28	100	52.718	ENSCAFG00020021648	RBM28	100	51.690	Canis_lupus_dingo
ENSELUG00000020602	rbm28	100	51.828	ENSCHIG00000014146	RBM28	100	52.351	Capra_hircus
ENSELUG00000020602	rbm28	67	60.000	ENSTSYG00000002892	RBM28	100	60.000	Carlito_syrichta
ENSELUG00000020602	rbm28	77	43.046	ENSCAPG00000013218	RBM28	92	41.857	Cavia_aperea
ENSELUG00000020602	rbm28	100	52.405	ENSCPOG00000006253	RBM28	100	51.777	Cavia_porcellus
ENSELUG00000020602	rbm28	78	62.500	ENSCCAG00000035105	RBM28	100	62.500	Cebus_capucinus
ENSELUG00000020602	rbm28	99	50.313	ENSCATG00000040497	RBM28	84	62.500	Cercocebus_atys
ENSELUG00000020602	rbm28	100	48.608	ENSCLAG00000003707	RBM28	100	47.832	Chinchilla_lanigera
ENSELUG00000020602	rbm28	99	51.955	ENSCSAG00000010161	RBM28	100	53.216	Chlorocebus_sabaeus
ENSELUG00000020602	rbm28	57	52.800	ENSCHOG00000001994	-	63	52.800	Choloepus_hoffmanni
ENSELUG00000020602	rbm28	54	51.948	ENSCPBG00000018088	RBM28	76	54.412	Chrysemys_picta_bellii
ENSELUG00000020602	rbm28	84	54.545	ENSCANG00000038397	RBM28	100	62.500	Colobus_angolensis_palliatus
ENSELUG00000020602	rbm28	65	53.010	ENSCGRG00001021278	Rbm28	56	55.819	Cricetulus_griseus_chok1gshd
ENSELUG00000020602	rbm28	100	51.768	ENSCGRG00000005098	Rbm28	100	52.278	Cricetulus_griseus_crigri
ENSELUG00000020602	rbm28	100	57.035	ENSCSEG00000004212	rbm28	100	57.197	Cynoglossus_semilaevis
ENSELUG00000020602	rbm28	59	63.499	ENSCVAG00000010493	rbm28	99	57.107	Cyprinodon_variegatus
ENSELUG00000020602	rbm28	87	58.009	ENSDARG00000025332	rbm28	100	52.863	Danio_rerio
ENSELUG00000020602	rbm28	100	51.875	ENSDNOG00000001124	RBM28	58	55.269	Dasypus_novemcinctus
ENSELUG00000020602	rbm28	75	52.224	ENSDORG00000004184	Rbm28	91	55.889	Dipodomys_ordii
ENSELUG00000020602	rbm28	62	37.778	FBgn0260456	CG4806	67	36.000	Drosophila_melanogaster
ENSELUG00000020602	rbm28	57	51.333	ENSETEG00000007130	RBM28	56	51.333	Echinops_telfairi
ENSELUG00000020602	rbm28	87	43.204	ENSEBUG00000004419	rbm28	98	38.077	Eptatretus_burgeri
ENSELUG00000020602	rbm28	65	52.816	ENSEASG00005008528	RBM28	100	51.669	Equus_asinus_asinus
ENSELUG00000020602	rbm28	65	52.816	ENSECAG00000007745	RBM28	100	52.233	Equus_caballus
ENSELUG00000020602	rbm28	100	47.329	ENSEEUG00000002389	RBM28	83	61.809	Erinaceus_europaeus
ENSELUG00000020602	rbm28	100	52.704	ENSFCAG00000000946	RBM28	100	62.500	Felis_catus
ENSELUG00000020602	rbm28	100	51.527	ENSFDAG00000010169	RBM28	100	51.584	Fukomys_damarensis
ENSELUG00000020602	rbm28	59	58.315	ENSGMOG00000007091	rbm28	100	53.153	Gadus_morhua
ENSELUG00000020602	rbm28	59	61.422	ENSGAFG00000004802	rbm28	97	61.688	Gambusia_affinis
ENSELUG00000020602	rbm28	59	62.745	ENSGACG00000012612	rbm28	100	55.627	Gasterosteus_aculeatus
ENSELUG00000020602	rbm28	83	61.500	ENSGAGG00000008873	RBM28	88	65.803	Gopherus_agassizii
ENSELUG00000020602	rbm28	95	51.120	ENSGGOG00000004644	RBM28	97	51.001	Gorilla_gorilla
ENSELUG00000020602	rbm28	95	57.257	ENSHBUG00000009611	rbm28	99	58.745	Haplochromis_burtoni
ENSELUG00000020602	rbm28	100	51.458	ENSHGLG00000005409	RBM28	100	51.781	Heterocephalus_glaber_female
ENSELUG00000020602	rbm28	100	51.458	ENSHGLG00100016458	RBM28	100	51.781	Heterocephalus_glaber_male
ENSELUG00000020602	rbm28	82	51.620	ENSHCOG00000010597	rbm28	56	51.620	Hippocampus_comes
ENSELUG00000020602	rbm28	57	48.884	ENSIPUG00000007103	rbm28	94	45.669	Ictalurus_punctatus
ENSELUG00000020602	rbm28	100	51.311	ENSSTOG00000002169	RBM28	100	51.059	Ictidomys_tridecemlineatus
ENSELUG00000020602	rbm28	57	51.910	ENSJJAG00000022400	Rbm28	59	53.452	Jaculus_jaculus
ENSELUG00000020602	rbm28	59	61.472	ENSKMAG00000013348	rbm28	99	55.805	Kryptolebias_marmoratus
ENSELUG00000020602	rbm28	59	62.500	ENSLBEG00000012998	rbm28	100	57.179	Labrus_bergylta
ENSELUG00000020602	rbm28	100	58.537	ENSLOCG00000015541	rbm28	81	61.100	Lepisosteus_oculatus
ENSELUG00000020602	rbm28	100	51.625	ENSLAFG00000010717	RBM28	100	51.256	Loxodonta_africana
ENSELUG00000020602	rbm28	99	52.393	ENSMFAG00000031036	RBM28	100	62.500	Macaca_fascicularis
ENSELUG00000020602	rbm28	99	52.327	ENSMMUG00000007250	RBM28	100	62.500	Macaca_mulatta
ENSELUG00000020602	rbm28	99	52.994	ENSMNEG00000036970	RBM28	76	62.500	Macaca_nemestrina
ENSELUG00000020602	rbm28	91	54.140	ENSMLEG00000037717	RBM28	100	55.603	Mandrillus_leucophaeus
ENSELUG00000020602	rbm28	99	60.124	ENSMAMG00000008525	rbm28	100	59.748	Mastacembelus_armatus
ENSELUG00000020602	rbm28	93	56.815	ENSMZEG00005019625	rbm28	100	58.038	Maylandia_zebra
ENSELUG00000020602	rbm28	64	51.262	ENSMAUG00000002263	Rbm28	56	53.632	Mesocricetus_auratus
ENSELUG00000020602	rbm28	65	52.987	ENSMICG00000000107	RBM28	100	50.332	Microcebus_murinus
ENSELUG00000020602	rbm28	100	53.485	ENSMOCG00000014615	Rbm28	100	53.350	Microtus_ochrogaster
ENSELUG00000020602	rbm28	59	58.531	ENSMMOG00000008600	rbm28	99	55.906	Mola_mola
ENSELUG00000020602	rbm28	100	52.971	ENSMODG00000015151	RBM28	100	53.797	Monodelphis_domestica
ENSELUG00000020602	rbm28	59	65.443	ENSMALG00000006419	rbm28	100	57.484	Monopterus_albus
ENSELUG00000020602	rbm28	100	52.097	MGP_CAROLIEiJ_G0028162	Rbm28	100	51.403	Mus_caroli
ENSELUG00000020602	rbm28	100	52.351	ENSMUSG00000029701	Rbm28	100	51.658	Mus_musculus
ENSELUG00000020602	rbm28	100	51.641	MGP_PahariEiJ_G0021920	Rbm28	100	50.875	Mus_pahari
ENSELUG00000020602	rbm28	100	52.478	MGP_SPRETEiJ_G0029162	Rbm28	100	51.786	Mus_spretus
ENSELUG00000020602	rbm28	100	52.785	ENSMPUG00000006511	RBM28	100	52.405	Mustela_putorius_furo
ENSELUG00000020602	rbm28	100	51.321	ENSMLUG00000002186	RBM28	100	50.692	Myotis_lucifugus
ENSELUG00000020602	rbm28	100	50.000	ENSNGAG00000017946	-	100	50.064	Nannospalax_galili
ENSELUG00000020602	rbm28	100	51.918	ENSNGAG00000006480	-	100	52.302	Nannospalax_galili
ENSELUG00000020602	rbm28	100	51.945	ENSNLEG00000012307	RBM28	77	62.500	Nomascus_leucogenys
ENSELUG00000020602	rbm28	81	65.000	ENSMEUG00000009611	RBM28	89	65.000	Notamacropus_eugenii
ENSELUG00000020602	rbm28	82	53.551	ENSOPRG00000015140	RBM28	84	53.551	Ochotona_princeps
ENSELUG00000020602	rbm28	100	49.682	ENSODEG00000003213	-	100	49.042	Octodon_degus
ENSELUG00000020602	rbm28	90	48.017	ENSODEG00000013217	-	82	57.598	Octodon_degus
ENSELUG00000020602	rbm28	59	64.147	ENSONIG00000014924	rbm28	100	58.794	Oreochromis_niloticus
ENSELUG00000020602	rbm28	60	50.526	ENSOANG00000000815	-	64	49.016	Ornithorhynchus_anatinus
ENSELUG00000020602	rbm28	100	50.000	ENSOCUG00000003009	RBM28	100	51.422	Oryctolagus_cuniculus
ENSELUG00000020602	rbm28	59	64.301	ENSORLG00000009636	rbm28	99	57.962	Oryzias_latipes
ENSELUG00000020602	rbm28	59	64.502	ENSORLG00020002123	rbm28	99	58.718	Oryzias_latipes_hni
ENSELUG00000020602	rbm28	85	66.500	ENSORLG00015015030	rbm28	99	66.500	Oryzias_latipes_hsok
ENSELUG00000020602	rbm28	59	64.316	ENSOMEG00000007801	rbm28	100	59.085	Oryzias_melastigma
ENSELUG00000020602	rbm28	90	60.000	ENSOGAG00000006011	RBM28	100	60.000	Otolemur_garnettii
ENSELUG00000020602	rbm28	100	50.993	ENSOARG00000002547	RBM28	100	52.611	Ovis_aries
ENSELUG00000020602	rbm28	100	52.363	ENSPPAG00000041730	RBM28	100	62.500	Pan_paniscus
ENSELUG00000020602	rbm28	100	51.372	ENSPPRG00000004420	RBM28	100	62.500	Panthera_pardus
ENSELUG00000020602	rbm28	100	52.207	ENSPTIG00000008550	RBM28	100	62.500	Panthera_tigris_altaica
ENSELUG00000020602	rbm28	100	52.363	ENSPTRG00000019659	RBM28	100	62.500	Pan_troglodytes
ENSELUG00000020602	rbm28	99	51.489	ENSPANG00000022295	RBM28	100	52.434	Papio_anubis
ENSELUG00000020602	rbm28	99	58.045	ENSPKIG00000023453	rbm28	99	56.967	Paramormyrops_kingsleyae
ENSELUG00000020602	rbm28	84	65.403	ENSPMGG00000012840	rbm28	100	59.868	Periophthalmus_magnuspinnatus
ENSELUG00000020602	rbm28	100	52.447	ENSPCIG00000012810	RBM28	100	52.513	Phascolarctos_cinereus
ENSELUG00000020602	rbm28	59	61.123	ENSPFOG00000018209	rbm28	100	55.133	Poecilia_formosa
ENSELUG00000020602	rbm28	58	61.135	ENSPLAG00000016078	rbm28	96	55.939	Poecilia_latipinna
ENSELUG00000020602	rbm28	59	60.991	ENSPMEG00000004292	rbm28	100	55.348	Poecilia_mexicana
ENSELUG00000020602	rbm28	59	60.475	ENSPREG00000014287	rbm28	99	55.247	Poecilia_reticulata
ENSELUG00000020602	rbm28	100	52.196	ENSPPYG00000017975	RBM28	100	52.963	Pongo_abelii
ENSELUG00000020602	rbm28	74	51.743	ENSPCAG00000008223	RBM28	82	51.596	Procavia_capensis
ENSELUG00000020602	rbm28	100	51.314	ENSPCOG00000016797	RBM28	76	62.500	Propithecus_coquereli
ENSELUG00000020602	rbm28	73	66.355	ENSPVAG00000005443	RBM28	72	69.697	Pteropus_vampyrus
ENSELUG00000020602	rbm28	100	57.323	ENSPNYG00000014003	rbm28	100	59.085	Pundamilia_nyererei
ENSELUG00000020602	rbm28	100	51.519	ENSRNOG00000005468	Rbm28	100	51.399	Rattus_norvegicus
ENSELUG00000020602	rbm28	99	51.183	ENSRBIG00000033990	RBM28	100	62.500	Rhinopithecus_bieti
ENSELUG00000020602	rbm28	99	51.995	ENSRROG00000040747	RBM28	84	62.500	Rhinopithecus_roxellana
ENSELUG00000020602	rbm28	91	49.751	ENSSBOG00000012308	RBM28	100	50.510	Saimiri_boliviensis_boliviensis
ENSELUG00000020602	rbm28	95	51.268	ENSSHAG00000017017	RBM28	95	49.869	Sarcophilus_harrisii
ENSELUG00000020602	rbm28	59	60.860	ENSSFOG00015001231	rbm28	100	55.626	Scleropages_formosus
ENSELUG00000020602	rbm28	59	59.395	ENSSMAG00000003885	rbm28	99	55.709	Scophthalmus_maximus
ENSELUG00000020602	rbm28	59	67.024	ENSSDUG00000014270	rbm28	97	62.863	Seriola_dumerili
ENSELUG00000020602	rbm28	59	66.311	ENSSLDG00000020099	rbm28	100	59.241	Seriola_lalandi_dorsalis
ENSELUG00000020602	rbm28	74	61.358	ENSSARG00000008303	RBM28	79	59.701	Sorex_araneus
ENSELUG00000020602	rbm28	67	69.118	ENSSPUG00000000838	RBM28	78	69.118	Sphenodon_punctatus
ENSELUG00000020602	rbm28	59	66.304	ENSSPAG00000023305	rbm28	100	58.367	Stegastes_partitus
ENSELUG00000020602	rbm28	100	52.823	ENSSSCG00000031847	RBM28	100	51.673	Sus_scrofa
ENSELUG00000020602	rbm28	59	60.341	ENSTRUG00000013311	rbm28	99	54.957	Takifugu_rubripes
ENSELUG00000020602	rbm28	99	56.030	ENSTNIG00000017962	rbm28	99	55.542	Tetraodon_nigroviridis
ENSELUG00000020602	rbm28	68	55.224	ENSTBEG00000012749	RBM28	70	55.072	Tupaia_belangeri
ENSELUG00000020602	rbm28	100	52.081	ENSTTRG00000013647	RBM28	58	55.819	Tursiops_truncatus
ENSELUG00000020602	rbm28	100	49.874	ENSUAMG00000006949	RBM28	100	46.280	Ursus_americanus
ENSELUG00000020602	rbm28	100	52.711	ENSUMAG00000005997	RBM28	100	52.837	Ursus_maritimus
ENSELUG00000020602	rbm28	85	49.115	ENSVPAG00000008304	RBM28	85	49.779	Vicugna_pacos
ENSELUG00000020602	rbm28	100	52.585	ENSVVUG00000007270	RBM28	100	51.899	Vulpes_vulpes
ENSELUG00000020602	rbm28	99	49.626	ENSXETG00000009271	rbm28	99	49.132	Xenopus_tropicalis
ENSELUG00000020602	rbm28	59	58.315	ENSXCOG00000020357	rbm28	91	58.315	Xiphophorus_couchianus
ENSELUG00000020602	rbm28	59	61.605	ENSXMAG00000004415	rbm28	99	56.210	Xiphophorus_maculatus