EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000020846 (Gene tree)
Gene ID: 105014918
Gene Symbol: setd1ba
Alias: im:7156157|si:dkey-237o15.4
Full Name: histone-lysine N-methyltransferase SETD1B-A
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 17361 bases
Position: chrLG14:9870816-9888176
Accession: 105014918
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000040389	RRM_1	PF00076.22	1.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000032608	-	5565	XM_013137128	ENSELUP00000040389	1854 (aa)	XP_012992582	UPI000661DAFC

Gene Model

Click here to download ENSELUG00000020846's gene model file

Pathways

Pathway ID	Pathway Name	Source
els00310	Lysine degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000020846's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000020846	setd1ba	53	63.190	ENSELUG00000020261	setd1a	55	59.831

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000020846	setd1ba	100	64.047	ENSACIG00000016453	setd1ba	100	63.018	Amphilophus_citrinellus
ENSELUG00000020846	setd1ba	89	71.869	ENSATEG00000021563	setd1ba	100	70.097	Anabas_testudineus
ENSELUG00000020846	setd1ba	87	56.901	ENSAPLG00000005217	SETD1B	86	56.662	Anas_platyrhynchos
ENSELUG00000020846	setd1ba	55	57.383	ENSTSYG00000033777	SETD1B	54	58.692	Carlito_syrichta
ENSELUG00000020846	setd1ba	53	80.122	ENSCLAG00000013200	SETD1B	73	59.802	Chinchilla_lanigera
ENSELUG00000020846	setd1ba	51	88.254	ENSGMOG00000009831	setd1ba	59	88.254	Gadus_morhua
ENSELUG00000020846	setd1ba	87	68.471	ENSGAFG00000008712	setd1ba	89	68.790	Gambusia_affinis
ENSELUG00000020846	setd1ba	100	64.923	ENSLBEG00000020113	setd1ba	61	77.861	Labrus_bergylta
ENSELUG00000020846	setd1ba	66	74.930	ENSODEG00000010155	SETD1B	51	58.937	Octodon_degus
ENSELUG00000020846	setd1ba	62	69.667	ENSONIG00000010832	-	53	58.219	Oreochromis_niloticus
ENSELUG00000020846	setd1ba	55	70.126	ENSORLG00015004156	setd1ba	81	69.163	Oryzias_latipes_hsok
ENSELUG00000020846	setd1ba	88	68.085	ENSPMGG00000011527	setd1ba	93	67.211	Periophthalmus_magnuspinnatus
ENSELUG00000020846	setd1ba	54	67.754	ENSPFOG00000019768	setd1ba	100	64.598	Poecilia_formosa
ENSELUG00000020846	setd1ba	54	72.163	ENSPNYG00000009484	setd1ba	99	66.437	Pundamilia_nyererei
ENSELUG00000020846	setd1ba	100	70.480	ENSSPAG00000015470	setd1ba	100	69.093	Stegastes_partitus
ENSELUG00000020846	setd1ba	98	62.687	ENSTRUG00000009533	setd1ba	55	66.864	Takifugu_rubripes
ENSELUG00000020846	setd1ba	63	49.379	ENSXETG00000003760	setd1b	51	54.915	Xenopus_tropicalis