EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000020878 (Gene tree)
Gene ID: 105007824
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein 45
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 18856 bases
Position: chrAZJR03000866.1:9423-28278
Accession: 105007824
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000021846	RRM_1	PF00076.22	1e-45	1	4
ENSELUP00000021846	RRM_1	PF00076.22	1e-45	2	4
ENSELUP00000021846	RRM_1	PF00076.22	1e-45	3	4
ENSELUP00000021846	RRM_1	PF00076.22	1e-45	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000032633	-	4240	XM_010866884	ENSELUP00000021846	469 (aa)	XP_010865186	UPI000577E183

Gene Model

Click here to download ENSELUG00000020878's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000020878's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000020878	-	100	73.248	ENSELUG00000023238	rbm45	100	73.248

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000020878	-	98	60.606	ENSG00000155636	RBM45	99	60.145	Homo_sapiens
ENSELUG00000020878	-	100	74.739	ENSAPOG00000009219	rbm45	100	74.948	Acanthochromis_polyacanthus
ENSELUG00000020878	-	98	60.560	ENSAMEG00000000896	RBM45	96	60.560	Ailuropoda_melanoleuca
ENSELUG00000020878	-	100	73.573	ENSACIG00000009234	rbm45	100	73.573	Amphilophus_citrinellus
ENSELUG00000020878	-	100	74.375	ENSAOCG00000007638	rbm45	100	74.583	Amphiprion_ocellaris
ENSELUG00000020878	-	100	74.530	ENSAPEG00000014352	rbm45	100	74.739	Amphiprion_percula
ENSELUG00000020878	-	100	74.414	ENSATEG00000016948	rbm45	100	74.414	Anabas_testudineus
ENSELUG00000020878	-	93	55.614	ENSAPLG00000011049	RBM45	100	55.614	Anas_platyrhynchos
ENSELUG00000020878	-	98	60.390	ENSANAG00000034660	RBM45	96	60.390	Aotus_nancymaae
ENSELUG00000020878	-	100	73.774	ENSACLG00000027286	rbm45	100	73.774	Astatotilapia_calliptera
ENSELUG00000020878	-	100	75.000	ENSACLG00000027201	-	100	75.000	Astatotilapia_calliptera
ENSELUG00000020878	-	97	76.356	ENSAMXG00000007463	rbm45	98	76.356	Astyanax_mexicanus
ENSELUG00000020878	-	98	61.472	ENSBTAG00000006168	RBM45	96	61.472	Bos_taurus
ENSELUG00000020878	-	98	64.085	ENSCJAG00000021516	RBM45	96	64.085	Callithrix_jacchus
ENSELUG00000020878	-	98	59.829	ENSCAFG00000013640	RBM45	96	59.829	Canis_familiaris
ENSELUG00000020878	-	98	60.823	ENSCAFG00020007013	RBM45	96	60.823	Canis_lupus_dingo
ENSELUG00000020878	-	98	61.255	ENSCHIG00000010687	RBM45	96	61.255	Capra_hircus
ENSELUG00000020878	-	98	61.039	ENSTSYG00000007757	RBM45	96	61.039	Carlito_syrichta
ENSELUG00000020878	-	93	52.507	ENSCAPG00000009388	RBM45	93	52.480	Cavia_aperea
ENSELUG00000020878	-	98	58.836	ENSCPOG00000000684	RBM45	96	58.836	Cavia_porcellus
ENSELUG00000020878	-	98	60.606	ENSCCAG00000022783	RBM45	96	60.606	Cebus_capucinus
ENSELUG00000020878	-	98	61.039	ENSCATG00000041082	RBM45	96	61.039	Cercocebus_atys
ENSELUG00000020878	-	98	58.781	ENSCLAG00000015215	RBM45	94	58.781	Chinchilla_lanigera
ENSELUG00000020878	-	98	61.039	ENSCSAG00000014231	RBM45	96	61.039	Chlorocebus_sabaeus
ENSELUG00000020878	-	96	58.839	ENSCHOG00000009809	RBM45	100	58.839	Choloepus_hoffmanni
ENSELUG00000020878	-	100	55.649	ENSCPBG00000003246	RBM45	100	55.925	Chrysemys_picta_bellii
ENSELUG00000020878	-	98	61.039	ENSCANG00000040777	RBM45	96	61.039	Colobus_angolensis_palliatus
ENSELUG00000020878	-	98	59.785	ENSCGRG00001005759	Rbm45	100	58.836	Cricetulus_griseus_chok1gshd
ENSELUG00000020878	-	98	59.785	ENSCGRG00000010816	Rbm45	100	58.836	Cricetulus_griseus_crigri
ENSELUG00000020878	-	100	70.042	ENSCSEG00000017409	rbm45	100	70.042	Cynoglossus_semilaevis
ENSELUG00000020878	-	100	68.710	ENSCVAG00000016127	rbm45	100	68.710	Cyprinodon_variegatus
ENSELUG00000020878	-	99	71.795	ENSDARG00000063731	rbm45	99	71.795	Danio_rerio
ENSELUG00000020878	-	98	59.827	ENSDNOG00000001973	RBM45	96	59.957	Dasypus_novemcinctus
ENSELUG00000020878	-	98	60.823	ENSDORG00000015831	Rbm45	96	60.823	Dipodomys_ordii
ENSELUG00000020878	-	94	35.560	FBgn0035526	CG1316	96	35.331	Drosophila_melanogaster
ENSELUG00000020878	-	98	51.410	ENSETEG00000013424	RBM45	96	51.410	Echinops_telfairi
ENSELUG00000020878	-	97	48.089	ENSEBUG00000007042	rbm45	96	47.162	Eptatretus_burgeri
ENSELUG00000020878	-	98	60.823	ENSEASG00005022475	RBM45	96	60.823	Equus_asinus_asinus
ENSELUG00000020878	-	98	60.823	ENSECAG00000017129	RBM45	96	60.823	Equus_caballus
ENSELUG00000020878	-	54	55.556	ENSEEUG00000001843	RBM45	99	55.556	Erinaceus_europaeus
ENSELUG00000020878	-	98	60.390	ENSFCAG00000018793	RBM45	96	60.390	Felis_catus
ENSELUG00000020878	-	93	55.990	ENSFALG00000003330	RBM45	100	55.990	Ficedula_albicollis
ENSELUG00000020878	-	98	60.173	ENSFDAG00000006840	-	97	59.915	Fukomys_damarensis
ENSELUG00000020878	-	96	60.766	ENSFHEG00000012844	rbm45	95	60.766	Fundulus_heteroclitus
ENSELUG00000020878	-	100	75.745	ENSGMOG00000002427	rbm45	100	76.170	Gadus_morhua
ENSELUG00000020878	-	98	56.223	ENSGALG00000009202	RBM45	91	56.223	Gallus_gallus
ENSELUG00000020878	-	100	72.399	ENSGAFG00000003709	rbm45	100	72.399	Gambusia_affinis
ENSELUG00000020878	-	98	72.258	ENSGACG00000011659	rbm45	100	72.570	Gasterosteus_aculeatus
ENSELUG00000020878	-	84	56.110	ENSGAGG00000017616	RBM45	97	56.931	Gopherus_agassizii
ENSELUG00000020878	-	98	60.606	ENSGGOG00000013981	RBM45	96	60.606	Gorilla_gorilla
ENSELUG00000020878	-	100	74.788	ENSHBUG00000015980	rbm45	100	74.788	Haplochromis_burtoni
ENSELUG00000020878	-	98	59.740	ENSHGLG00000007342	RBM45	97	59.488	Heterocephalus_glaber_female
ENSELUG00000020878	-	97	38.913	ENSHGLG00100007533	-	94	38.998	Heterocephalus_glaber_male
ENSELUG00000020878	-	96	59.502	ENSHGLG00100011482	-	98	59.502	Heterocephalus_glaber_male
ENSELUG00000020878	-	99	70.600	ENSHCOG00000000850	rbm45	99	70.600	Hippocampus_comes
ENSELUG00000020878	-	100	73.093	ENSIPUG00000019576	RBM45	100	73.093	Ictalurus_punctatus
ENSELUG00000020878	-	98	60.606	ENSSTOG00000002708	RBM45	96	60.606	Ictidomys_tridecemlineatus
ENSELUG00000020878	-	85	59.453	ENSJJAG00000001312	Rbm45	89	59.453	Jaculus_jaculus
ENSELUG00000020878	-	100	69.311	ENSKMAG00000007636	rbm45	100	69.520	Kryptolebias_marmoratus
ENSELUG00000020878	-	97	76.044	ENSLBEG00000002556	-	99	76.044	Labrus_bergylta
ENSELUG00000020878	-	99	76.170	ENSLBEG00000011642	rbm45	99	76.170	Labrus_bergylta
ENSELUG00000020878	-	100	61.284	ENSLACG00000003728	RBM45	100	61.284	Latimeria_chalumnae
ENSELUG00000020878	-	100	77.004	ENSLOCG00000006862	rbm45	100	77.004	Lepisosteus_oculatus
ENSELUG00000020878	-	94	59.115	ENSLAFG00000007464	RBM45	97	59.115	Loxodonta_africana
ENSELUG00000020878	-	98	61.039	ENSMFAG00000042524	RBM45	96	61.039	Macaca_fascicularis
ENSELUG00000020878	-	98	61.039	ENSMMUG00000002013	RBM45	96	61.039	Macaca_mulatta
ENSELUG00000020878	-	98	61.039	ENSMNEG00000029136	RBM45	96	61.039	Macaca_nemestrina
ENSELUG00000020878	-	98	61.039	ENSMLEG00000042404	RBM45	96	61.039	Mandrillus_leucophaeus
ENSELUG00000020878	-	100	74.627	ENSMAMG00000022413	rbm45	100	74.627	Mastacembelus_armatus
ENSELUG00000020878	-	100	75.000	ENSMZEG00005027295	rbm45	100	75.000	Maylandia_zebra
ENSELUG00000020878	-	93	55.759	ENSMGAG00000009496	RBM45	100	55.759	Meleagris_gallopavo
ENSELUG00000020878	-	98	59.698	ENSMAUG00000016948	Rbm45	96	59.698	Mesocricetus_auratus
ENSELUG00000020878	-	98	60.606	ENSMICG00000003787	RBM45	96	60.606	Microcebus_murinus
ENSELUG00000020878	-	98	59.052	ENSMOCG00000017295	Rbm45	96	59.052	Microtus_ochrogaster
ENSELUG00000020878	-	99	73.118	ENSMMOG00000006808	rbm45	99	73.118	Mola_mola
ENSELUG00000020878	-	98	60.259	ENSMODG00000009742	RBM45	96	60.259	Monodelphis_domestica
ENSELUG00000020878	-	99	73.932	ENSMALG00000022126	rbm45	99	74.342	Monopterus_albus
ENSELUG00000020878	-	98	60.560	MGP_CAROLIEiJ_G0023686	Rbm45	96	60.560	Mus_caroli
ENSELUG00000020878	-	98	60.776	ENSMUSG00000042369	Rbm45	96	60.776	Mus_musculus
ENSELUG00000020878	-	98	60.345	MGP_PahariEiJ_G0025137	Rbm45	96	60.345	Mus_pahari
ENSELUG00000020878	-	98	60.991	MGP_SPRETEiJ_G0024607	Rbm45	96	60.991	Mus_spretus
ENSELUG00000020878	-	98	60.390	ENSMPUG00000003205	RBM45	96	60.390	Mustela_putorius_furo
ENSELUG00000020878	-	98	48.298	ENSMLUG00000005782	RBM45	96	48.298	Myotis_lucifugus
ENSELUG00000020878	-	98	59.740	ENSNGAG00000023886	Rbm45	96	59.740	Nannospalax_galili
ENSELUG00000020878	-	100	80.663	ENSNBRG00000008816	rbm45	100	80.663	Neolamprologus_brichardi
ENSELUG00000020878	-	98	60.823	ENSNLEG00000006080	RBM45	96	60.823	Nomascus_leucogenys
ENSELUG00000020878	-	76	62.570	ENSMEUG00000007995	-	62	62.570	Notamacropus_eugenii
ENSELUG00000020878	-	80	62.931	ENSOPRG00000002626	RBM45	80	62.931	Ochotona_princeps
ENSELUG00000020878	-	98	59.227	ENSODEG00000007959	RBM45	96	59.355	Octodon_degus
ENSELUG00000020878	-	100	75.424	ENSONIG00000001450	rbm45	100	75.424	Oreochromis_niloticus
ENSELUG00000020878	-	96	60.938	ENSOANG00000008627	RBM45	100	60.938	Ornithorhynchus_anatinus
ENSELUG00000020878	-	98	60.390	ENSOCUG00000001125	RBM45	96	60.390	Oryctolagus_cuniculus
ENSELUG00000020878	-	100	75.319	ENSORLG00000024508	rbm45	100	75.319	Oryzias_latipes
ENSELUG00000020878	-	100	75.319	ENSOMEG00000015870	rbm45	100	75.319	Oryzias_melastigma
ENSELUG00000020878	-	98	60.173	ENSOGAG00000015195	RBM45	96	60.173	Otolemur_garnettii
ENSELUG00000020878	-	96	60.746	ENSOARG00000017348	RBM45	96	60.746	Ovis_aries
ENSELUG00000020878	-	98	60.345	ENSPPAG00000026278	RBM45	96	60.345	Pan_paniscus
ENSELUG00000020878	-	98	60.390	ENSPPRG00000017073	RBM45	96	60.390	Panthera_pardus
ENSELUG00000020878	-	98	60.390	ENSPTIG00000021277	RBM45	96	60.390	Panthera_tigris_altaica
ENSELUG00000020878	-	98	60.606	ENSPTRG00000012686	RBM45	96	60.606	Pan_troglodytes
ENSELUG00000020878	-	98	61.039	ENSPANG00000016088	RBM45	96	61.039	Papio_anubis
ENSELUG00000020878	-	100	74.207	ENSPKIG00000000284	rbm45	100	74.207	Paramormyrops_kingsleyae
ENSELUG00000020878	-	86	54.494	ENSPSIG00000002884	RBM45	100	54.494	Pelodiscus_sinensis
ENSELUG00000020878	-	100	64.043	ENSPMGG00000001551	rbm45	100	64.043	Periophthalmus_magnuspinnatus
ENSELUG00000020878	-	98	59.698	ENSPEMG00000002470	Rbm45	96	59.698	Peromyscus_maniculatus_bairdii
ENSELUG00000020878	-	98	49.257	ENSPMAG00000002965	rbm45	98	49.257	Petromyzon_marinus
ENSELUG00000020878	-	98	60.259	ENSPCIG00000025402	RBM45	96	60.259	Phascolarctos_cinereus
ENSELUG00000020878	-	100	71.975	ENSPFOG00000006641	rbm45	100	71.975	Poecilia_formosa
ENSELUG00000020878	-	100	71.975	ENSPLAG00000010571	rbm45	100	71.975	Poecilia_latipinna
ENSELUG00000020878	-	100	71.975	ENSPMEG00000001067	rbm45	100	71.975	Poecilia_mexicana
ENSELUG00000020878	-	100	71.338	ENSPREG00000004579	rbm45	100	71.338	Poecilia_reticulata
ENSELUG00000020878	-	98	60.606	ENSPPYG00000012974	RBM45	96	60.606	Pongo_abelii
ENSELUG00000020878	-	75	62.128	ENSPCAG00000004338	RBM45	74	62.128	Procavia_capensis
ENSELUG00000020878	-	98	60.606	ENSPCOG00000021526	RBM45	96	60.606	Propithecus_coquereli
ENSELUG00000020878	-	98	60.173	ENSPVAG00000010390	RBM45	96	60.173	Pteropus_vampyrus
ENSELUG00000020878	-	96	67.254	ENSPNYG00000010755	rbm45	100	67.254	Pundamilia_nyererei
ENSELUG00000020878	-	100	76.321	ENSPNAG00000021750	rbm45	100	76.321	Pygocentrus_nattereri
ENSELUG00000020878	-	98	59.052	ENSRNOG00000010595	Rbm45	96	59.052	Rattus_norvegicus
ENSELUG00000020878	-	98	60.823	ENSRBIG00000033680	RBM45	96	60.823	Rhinopithecus_bieti
ENSELUG00000020878	-	98	60.823	ENSRROG00000031398	RBM45	96	60.823	Rhinopithecus_roxellana
ENSELUG00000020878	-	98	60.606	ENSSBOG00000005469	RBM45	96	60.606	Saimiri_boliviensis_boliviensis
ENSELUG00000020878	-	93	60.574	ENSSHAG00000005667	RBM45	100	60.574	Sarcophilus_harrisii
ENSELUG00000020878	-	100	78.224	ENSSFOG00015012262	rbm45	100	78.224	Scleropages_formosus
ENSELUG00000020878	-	91	74.592	ENSSMAG00000001822	rbm45	96	74.592	Scophthalmus_maximus
ENSELUG00000020878	-	100	75.693	ENSSDUG00000014461	rbm45	100	75.693	Seriola_dumerili
ENSELUG00000020878	-	100	75.693	ENSSLDG00000017621	rbm45	100	75.693	Seriola_lalandi_dorsalis
ENSELUG00000020878	-	98	48.812	ENSSARG00000001516	RBM45	96	48.812	Sorex_araneus
ENSELUG00000020878	-	98	53.763	ENSSPUG00000005740	RBM45	90	53.763	Sphenodon_punctatus
ENSELUG00000020878	-	100	74.012	ENSSPAG00000023188	rbm45	100	74.012	Stegastes_partitus
ENSELUG00000020878	-	98	68.269	ENSSSCG00000015996	RBM45	96	68.269	Sus_scrofa
ENSELUG00000020878	-	62	58.772	ENSTGUG00000015654	-	99	58.772	Taeniopygia_guttata
ENSELUG00000020878	-	98	54.936	ENSTGUG00000009116	-	94	54.936	Taeniopygia_guttata
ENSELUG00000020878	-	100	72.921	ENSTRUG00000005485	rbm45	100	72.921	Takifugu_rubripes
ENSELUG00000020878	-	100	66.875	ENSTNIG00000009859	rbm45	100	66.875	Tetraodon_nigroviridis
ENSELUG00000020878	-	67	53.696	ENSTBEG00000014236	-	100	53.696	Tupaia_belangeri
ENSELUG00000020878	-	98	52.381	ENSTTRG00000007653	RBM45	96	52.381	Tursiops_truncatus
ENSELUG00000020878	-	98	60.606	ENSUAMG00000012989	RBM45	96	60.606	Ursus_americanus
ENSELUG00000020878	-	97	60.832	ENSUMAG00000016503	RBM45	97	60.259	Ursus_maritimus
ENSELUG00000020878	-	68	60.185	ENSVPAG00000001558	RBM45	95	60.185	Vicugna_pacos
ENSELUG00000020878	-	98	60.823	ENSVVUG00000010078	RBM45	96	60.823	Vulpes_vulpes
ENSELUG00000020878	-	100	57.287	ENSXETG00000015007	rbm45	100	57.287	Xenopus_tropicalis
ENSELUG00000020878	-	100	69.574	ENSXCOG00000014247	rbm45	100	69.574	Xiphophorus_couchianus
ENSELUG00000020878	-	100	72.187	ENSXMAG00000026302	rbm45	100	72.187	Xiphophorus_maculatus