EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000020882 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 18352 bases
Position: chrLG14:25529142-25547493
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000021860	zf-C2H2	PF00096.26	5.1e-31	1	5
ENSELUP00000021860	zf-C2H2	PF00096.26	5.1e-31	2	5
ENSELUP00000021860	zf-C2H2	PF00096.26	5.1e-31	3	5
ENSELUP00000021860	zf-C2H2	PF00096.26	5.1e-31	4	5
ENSELUP00000021860	zf-C2H2	PF00096.26	5.1e-31	5	5
ENSELUP00000021860	zf-met	PF12874.7	3.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000032655	-	4982	-	ENSELUP00000021860	542 (aa)	-	-

Gene Model

Click here to download ENSELUG00000020882's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000020882's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000020882	-	50	32.129	ENSELUG00000005894	prdm5	71	31.727
ENSELUG00000020882	-	98	42.342	ENSELUG00000022942	-	95	51.429
ENSELUG00000020882	-	53	45.045	ENSELUG00000013094	-	98	45.909
ENSELUG00000020882	-	54	40.816	ENSELUG00000019008	-	86	44.954
ENSELUG00000020882	-	87	31.311	ENSELUG00000016397	-	85	31.275
ENSELUG00000020882	-	59	47.853	ENSELUG00000013321	-	93	47.853
ENSELUG00000020882	-	80	48.485	ENSELUG00000000423	-	90	48.485
ENSELUG00000020882	-	83	40.392	ENSELUG00000005912	-	96	40.392
ENSELUG00000020882	-	82	46.452	ENSELUG00000000281	-	79	46.452
ENSELUG00000020882	-	53	43.333	ENSELUG00000021355	-	96	47.396
ENSELUG00000020882	-	53	48.227	ENSELUG00000009575	-	95	48.227
ENSELUG00000020882	-	56	38.843	ENSELUG00000018405	-	93	38.889
ENSELUG00000020882	-	83	47.321	ENSELUG00000019880	-	94	52.381
ENSELUG00000020882	-	51	35.644	ENSELUG00000021560	-	73	38.000
ENSELUG00000020882	-	77	42.458	ENSELUG00000012088	-	79	42.458
ENSELUG00000020882	-	53	41.224	ENSELUG00000018970	-	80	41.224
ENSELUG00000020882	-	60	45.536	ENSELUG00000020211	znf236	62	42.857
ENSELUG00000020882	-	51	39.574	ENSELUG00000013796	-	76	39.574
ENSELUG00000020882	-	66	46.429	ENSELUG00000021248	-	87	46.429
ENSELUG00000020882	-	72	40.204	ENSELUG00000008171	-	88	40.712
ENSELUG00000020882	-	74	48.780	ENSELUG00000022965	-	71	48.780
ENSELUG00000020882	-	77	41.964	ENSELUG00000008131	-	88	41.964
ENSELUG00000020882	-	80	46.544	ENSELUG00000013143	-	74	46.544
ENSELUG00000020882	-	97	41.204	ENSELUG00000008797	-	88	41.204
ENSELUG00000020882	-	57	38.000	ENSELUG00000020794	-	58	38.000
ENSELUG00000020882	-	53	37.333	ENSELUG00000013357	-	79	37.333
ENSELUG00000020882	-	67	35.315	ENSELUG00000021499	-	98	44.792
ENSELUG00000020882	-	53	40.826	ENSELUG00000006058	-	79	40.826
ENSELUG00000020882	-	77	46.715	ENSELUG00000008148	-	96	41.989

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000020882	-	51	33.865	ENSAPOG00000008319	-	65	33.865	Acanthochromis_polyacanthus
ENSELUG00000020882	-	66	52.727	ENSAPOG00000019138	-	75	52.727	Acanthochromis_polyacanthus
ENSELUG00000020882	-	50	44.172	ENSACIG00000017892	-	78	44.172	Amphilophus_citrinellus
ENSELUG00000020882	-	51	33.865	ENSAOCG00000014769	-	67	33.865	Amphiprion_ocellaris
ENSELUG00000020882	-	51	33.865	ENSAOCG00000015944	-	61	33.865	Amphiprion_ocellaris
ENSELUG00000020882	-	77	50.000	ENSAPEG00000018762	-	71	50.000	Amphiprion_percula
ENSELUG00000020882	-	51	41.026	ENSCSEG00000008525	-	50	41.026	Cynoglossus_semilaevis
ENSELUG00000020882	-	77	47.436	ENSCSEG00000010453	-	61	47.436	Cynoglossus_semilaevis
ENSELUG00000020882	-	52	46.250	ENSCVAG00000003250	-	69	46.250	Cyprinodon_variegatus
ENSELUG00000020882	-	51	45.783	ENSCVAG00000020141	-	94	45.783	Cyprinodon_variegatus
ENSELUG00000020882	-	54	41.991	ENSEBUG00000002290	-	59	41.991	Eptatretus_burgeri
ENSELUG00000020882	-	83	48.305	ENSGAFG00000011998	-	84	48.305	Gambusia_affinis
ENSELUG00000020882	-	77	43.256	ENSHCOG00000001873	-	83	43.256	Hippocampus_comes
ENSELUG00000020882	-	77	43.256	ENSHCOG00000008550	-	83	43.256	Hippocampus_comes
ENSELUG00000020882	-	53	31.325	ENSIPUG00000024004	-	88	31.325	Ictalurus_punctatus
ENSELUG00000020882	-	79	44.156	ENSMMOG00000017592	-	76	44.156	Mola_mola
ENSELUG00000020882	-	66	44.737	ENSORLG00020019227	-	64	44.037	Oryzias_latipes_hni
ENSELUG00000020882	-	93	50.641	ENSOMEG00000019114	-	89	48.921	Oryzias_melastigma
ENSELUG00000020882	-	68	31.776	ENSPMGG00000009571	-	75	38.340	Periophthalmus_magnuspinnatus
ENSELUG00000020882	-	76	46.632	ENSPLAG00000010067	-	64	46.632	Poecilia_latipinna
ENSELUG00000020882	-	66	47.059	ENSPMEG00000024117	-	53	48.571	Poecilia_mexicana
ENSELUG00000020882	-	51	32.000	ENSSMAG00000008308	-	65	32.000	Scophthalmus_maximus
ENSELUG00000020882	-	78	45.545	ENSSDUG00000020774	-	83	45.545	Seriola_dumerili
ENSELUG00000020882	-	94	38.686	ENSXCOG00000003441	-	88	43.056	Xiphophorus_couchianus
ENSELUG00000020882	-	76	45.536	ENSXCOG00000014360	-	95	45.536	Xiphophorus_couchianus