EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000020929 (Gene tree)
Gene ID: 105022478
Gene Symbol: ssb
Alias: wu:fb17f11
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 2220 bases
Position: chrLG16:15483985-15486204
Accession: 105022478
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000040395	RRM_1	PF00076.22	1.6e-12	1	1
ENSELUP00000040386	RRM_1	PF00076.22	1.6e-12	1	1
ENSELUP00000040395	RRM_3	PF08777.11	1.2e-27	1	1
ENSELUP00000040386	RRM_3	PF08777.11	1.7e-27	1	1
ENSELUP00000040386	La	PF05383.17	3.4e-20	1	1
ENSELUP00000040395	La	PF05383.17	3.5e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000032625	-	1203	XM_010890928	ENSELUP00000040395	400 (aa)	XP_010889230	UPI000576292F
ENSELUT00000032593	-	1218	-	ENSELUP00000040386	405 (aa)	-	-

Gene Model

Click here to download ENSELUG00000020929's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000020929's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000020929	ssb	100	59.512	ENSG00000138385	SSB	100	64.167	Homo_sapiens
ENSELUG00000020929	ssb	100	69.652	ENSAPOG00000003448	ssb	100	72.139	Acanthochromis_polyacanthus
ENSELUG00000020929	ssb	100	57.177	ENSAMEG00000010507	SSB	98	56.522	Ailuropoda_melanoleuca
ENSELUG00000020929	ssb	93	71.237	ENSACIG00000001738	ssb	97	70.968	Amphilophus_citrinellus
ENSELUG00000020929	ssb	100	73.632	ENSAOCG00000020398	ssb	100	73.383	Amphiprion_ocellaris
ENSELUG00000020929	ssb	100	73.881	ENSAPEG00000020395	ssb	100	73.632	Amphiprion_percula
ENSELUG00000020929	ssb	100	75.186	ENSATEG00000016884	ssb	100	74.938	Anabas_testudineus
ENSELUG00000020929	ssb	100	59.716	ENSAPLG00000006109	SSB	99	57.920	Anas_platyrhynchos
ENSELUG00000020929	ssb	100	57.561	ENSACAG00000017008	SSB	99	57.317	Anolis_carolinensis
ENSELUG00000020929	ssb	100	53.563	ENSANAG00000027195	-	98	53.102	Aotus_nancymaae
ENSELUG00000020929	ssb	100	65.672	ENSACLG00000010798	ssb	100	65.423	Astatotilapia_calliptera
ENSELUG00000020929	ssb	100	66.667	ENSAMXG00000012606	ssb	100	66.422	Astyanax_mexicanus
ENSELUG00000020929	ssb	100	59.902	ENSBTAG00000008716	SSB	98	59.406	Bos_taurus
ENSELUG00000020929	ssb	80	33.025	WBGene00016653	C44E4.4	82	32.822	Caenorhabditis_elegans
ENSELUG00000020929	ssb	100	58.824	ENSCJAG00000045073	SSB	98	58.313	Callithrix_jacchus
ENSELUG00000020929	ssb	100	59.360	ENSCAFG00000012418	SSB	98	58.853	Canis_familiaris
ENSELUG00000020929	ssb	100	59.360	ENSCAFG00020002900	SSB	98	58.853	Canis_lupus_dingo
ENSELUG00000020929	ssb	100	59.804	ENSCHIG00000022624	-	98	59.305	Capra_hircus
ENSELUG00000020929	ssb	100	57.037	ENSCHIG00000022196	-	83	61.747	Capra_hircus
ENSELUG00000020929	ssb	99	59.606	ENSTSYG00000000097	SSB	98	59.102	Carlito_syrichta
ENSELUG00000020929	ssb	100	59.951	ENSCPOG00000003338	SSB	98	59.453	Cavia_porcellus
ENSELUG00000020929	ssb	100	59.559	ENSCCAG00000035147	SSB	98	59.057	Cebus_capucinus
ENSELUG00000020929	ssb	72	56.997	ENSCATG00000036701	SSB	83	56.507	Cercocebus_atys
ENSELUG00000020929	ssb	99	45.906	ENSCATG00000042909	-	98	45.161	Cercocebus_atys
ENSELUG00000020929	ssb	100	59.360	ENSCLAG00000015617	-	98	58.955	Chinchilla_lanigera
ENSELUG00000020929	ssb	96	56.555	ENSCSAG00000018390	-	96	55.091	Chlorocebus_sabaeus
ENSELUG00000020929	ssb	100	60.294	ENSCSAG00000015200	SSB	88	59.951	Chlorocebus_sabaeus
ENSELUG00000020929	ssb	100	60.197	ENSCHOG00000007763	SSB	98	59.701	Choloepus_hoffmanni
ENSELUG00000020929	ssb	100	63.325	ENSCPBG00000006519	SSB	99	63.570	Chrysemys_picta_bellii
ENSELUG00000020929	ssb	99	47.525	ENSCANG00000028838	-	96	46.914	Colobus_angolensis_palliatus
ENSELUG00000020929	ssb	100	53.202	ENSCANG00000033240	-	98	52.250	Colobus_angolensis_palliatus
ENSELUG00000020929	ssb	100	60.294	ENSCANG00000027695	SSB	98	59.801	Colobus_angolensis_palliatus
ENSELUG00000020929	ssb	91	55.405	ENSCGRG00001024831	Ssb	98	53.333	Cricetulus_griseus_chok1gshd
ENSELUG00000020929	ssb	91	55.405	ENSCGRG00000005387	Ssb	98	53.333	Cricetulus_griseus_crigri
ENSELUG00000020929	ssb	100	70.545	ENSCSEG00000011599	ssb	100	68.069	Cynoglossus_semilaevis
ENSELUG00000020929	ssb	100	70.545	ENSCVAG00000021558	ssb	100	68.812	Cyprinodon_variegatus
ENSELUG00000020929	ssb	100	68.159	ENSDARG00000029252	ssb	100	68.159	Danio_rerio
ENSELUG00000020929	ssb	100	59.705	ENSDNOG00000013450	SSB	98	59.204	Dasypus_novemcinctus
ENSELUG00000020929	ssb	100	53.771	ENSDORG00000005543	Ssb	98	52.567	Dipodomys_ordii
ENSELUG00000020929	ssb	84	32.861	FBgn0011638	La	82	33.832	Drosophila_melanogaster
ENSELUG00000020929	ssb	51	63.861	ENSETEG00000004614	-	52	63.861	Echinops_telfairi
ENSELUG00000020929	ssb	91	46.301	ENSEBUG00000001237	ssb	87	46.608	Eptatretus_burgeri
ENSELUG00000020929	ssb	100	60.539	ENSEASG00005022835	SSB	98	60.050	Equus_asinus_asinus
ENSELUG00000020929	ssb	100	60.539	ENSECAG00000018495	SSB	98	60.050	Equus_caballus
ENSELUG00000020929	ssb	76	51.961	ENSEEUG00000008077	SSB	77	50.993	Erinaceus_europaeus
ENSELUG00000020929	ssb	100	59.360	ENSFCAG00000011601	SSB	98	58.853	Felis_catus
ENSELUG00000020929	ssb	99	62.562	ENSFALG00000000930	SSB	99	62.808	Ficedula_albicollis
ENSELUG00000020929	ssb	100	59.951	ENSFDAG00000000598	SSB	98	59.453	Fukomys_damarensis
ENSELUG00000020929	ssb	74	63.333	ENSFHEG00000003268	ssb	97	62.300	Fundulus_heteroclitus
ENSELUG00000020929	ssb	99	66.749	ENSGMOG00000002664	ssb	100	66.667	Gadus_morhua
ENSELUG00000020929	ssb	99	62.899	ENSGALG00000009677	SSB	99	61.916	Gallus_gallus
ENSELUG00000020929	ssb	100	66.093	ENSGAFG00000002749	ssb	100	68.966	Gambusia_affinis
ENSELUG00000020929	ssb	100	67.805	ENSGACG00000005107	ssb	100	68.049	Gasterosteus_aculeatus
ENSELUG00000020929	ssb	100	64.390	ENSGAGG00000007807	SSB	99	63.081	Gopherus_agassizii
ENSELUG00000020929	ssb	55	56.637	ENSGGOG00000023471	-	91	56.000	Gorilla_gorilla
ENSELUG00000020929	ssb	100	51.961	ENSGGOG00000024891	-	99	51.106	Gorilla_gorilla
ENSELUG00000020929	ssb	100	66.915	ENSHBUG00000006584	ssb	100	66.667	Haplochromis_burtoni
ENSELUG00000020929	ssb	99	54.975	ENSHGLG00000004478	-	98	53.846	Heterocephalus_glaber_female
ENSELUG00000020929	ssb	97	54.684	ENSHGLG00000005832	-	99	53.333	Heterocephalus_glaber_female
ENSELUG00000020929	ssb	100	59.564	ENSHGLG00000017580	-	98	58.088	Heterocephalus_glaber_female
ENSELUG00000020929	ssb	100	59.564	ENSHGLG00100003084	-	98	58.088	Heterocephalus_glaber_male
ENSELUG00000020929	ssb	100	53.580	ENSHGLG00100008767	-	98	52.500	Heterocephalus_glaber_male
ENSELUG00000020929	ssb	99	64.160	ENSHCOG00000019011	ssb	99	63.910	Hippocampus_comes
ENSELUG00000020929	ssb	100	70.833	ENSIPUG00000003681	SSB	100	67.647	Ictalurus_punctatus
ENSELUG00000020929	ssb	100	59.360	ENSSTOG00000008416	SSB	98	58.955	Ictidomys_tridecemlineatus
ENSELUG00000020929	ssb	100	52.844	ENSJJAG00000023158	-	99	51.069	Jaculus_jaculus
ENSELUG00000020929	ssb	90	46.111	ENSJJAG00000016250	-	94	44.290	Jaculus_jaculus
ENSELUG00000020929	ssb	100	72.705	ENSKMAG00000017317	ssb	100	72.457	Kryptolebias_marmoratus
ENSELUG00000020929	ssb	100	69.727	ENSLBEG00000017345	ssb	100	69.727	Labrus_bergylta
ENSELUG00000020929	ssb	100	57.946	ENSLACG00000014056	SSB	99	58.435	Latimeria_chalumnae
ENSELUG00000020929	ssb	99	70.075	ENSLOCG00000007933	ssb	99	70.075	Lepisosteus_oculatus
ENSELUG00000020929	ssb	100	56.295	ENSLAFG00000000867	-	99	56.532	Loxodonta_africana
ENSELUG00000020929	ssb	100	52.709	ENSLAFG00000028909	-	99	51.724	Loxodonta_africana
ENSELUG00000020929	ssb	74	45.455	ENSLAFG00000026721	-	98	44.108	Loxodonta_africana
ENSELUG00000020929	ssb	87	53.977	ENSMFAG00000041478	-	92	55.120	Macaca_fascicularis
ENSELUG00000020929	ssb	100	60.294	ENSMFAG00000039066	SSB	98	59.801	Macaca_fascicularis
ENSELUG00000020929	ssb	99	45.658	ENSMMUG00000039889	-	98	44.913	Macaca_mulatta
ENSELUG00000020929	ssb	100	60.294	ENSMMUG00000023051	SSB	98	59.801	Macaca_mulatta
ENSELUG00000020929	ssb	100	52.593	ENSMMUG00000011724	-	79	54.762	Macaca_mulatta
ENSELUG00000020929	ssb	100	50.608	ENSMNEG00000028321	SSB	82	68.468	Macaca_nemestrina
ENSELUG00000020929	ssb	87	53.977	ENSMNEG00000034698	-	92	55.120	Macaca_nemestrina
ENSELUG00000020929	ssb	100	42.469	ENSMLEG00000042644	-	80	43.976	Mandrillus_leucophaeus
ENSELUG00000020929	ssb	100	60.294	ENSMLEG00000035717	SSB	98	59.801	Mandrillus_leucophaeus
ENSELUG00000020929	ssb	100	73.762	ENSMAMG00000004800	ssb	100	73.515	Mastacembelus_armatus
ENSELUG00000020929	ssb	100	65.672	ENSMZEG00005005749	ssb	100	65.423	Maylandia_zebra
ENSELUG00000020929	ssb	99	62.654	ENSMGAG00000010328	SSB	99	62.255	Meleagris_gallopavo
ENSELUG00000020929	ssb	96	56.443	ENSMICG00000033304	-	91	57.851	Microcebus_murinus
ENSELUG00000020929	ssb	100	60.539	ENSMICG00000028252	-	98	60.050	Microcebus_murinus
ENSELUG00000020929	ssb	100	48.267	ENSMODG00000019271	-	99	48.039	Monodelphis_domestica
ENSELUG00000020929	ssb	87	57.059	ENSMODG00000007027	-	99	57.059	Monodelphis_domestica
ENSELUG00000020929	ssb	100	56.115	ENSMODG00000008227	-	99	56.416	Monodelphis_domestica
ENSELUG00000020929	ssb	91	71.429	ENSMALG00000008045	ssb	90	70.968	Monopterus_albus
ENSELUG00000020929	ssb	89	58.696	MGP_CAROLIEiJ_G0023629	-	95	65.563	Mus_caroli
ENSELUG00000020929	ssb	89	57.880	ENSMUSG00000068882	Ssb	95	65.563	Mus_musculus
ENSELUG00000020929	ssb	89	56.267	MGP_PahariEiJ_G0025081	-	95	64.901	Mus_pahari
ENSELUG00000020929	ssb	89	57.880	MGP_SPRETEiJ_G0024551	Ssb	95	65.563	Mus_spretus
ENSELUG00000020929	ssb	100	60.099	ENSMPUG00000000785	SSB	98	59.601	Mustela_putorius_furo
ENSELUG00000020929	ssb	100	58.950	ENSMLUG00000016316	SSB	99	58.134	Myotis_lucifugus
ENSELUG00000020929	ssb	100	66.667	ENSNBRG00000012661	ssb	100	66.418	Neolamprologus_brichardi
ENSELUG00000020929	ssb	100	60.049	ENSNLEG00000004958	SSB	98	59.553	Nomascus_leucogenys
ENSELUG00000020929	ssb	81	49.240	ENSNLEG00000028754	-	77	48.000	Nomascus_leucogenys
ENSELUG00000020929	ssb	62	65.863	ENSMEUG00000001650	-	100	65.863	Notamacropus_eugenii
ENSELUG00000020929	ssb	94	57.560	ENSODEG00000004202	-	99	57.294	Octodon_degus
ENSELUG00000020929	ssb	100	67.910	ENSONIG00000008776	ssb	100	67.662	Oreochromis_niloticus
ENSELUG00000020929	ssb	100	59.259	ENSOANG00000008543	SSB	99	58.924	Ornithorhynchus_anatinus
ENSELUG00000020929	ssb	100	59.360	ENSOCUG00000010396	SSB	99	59.113	Oryctolagus_cuniculus
ENSELUG00000020929	ssb	100	66.832	ENSORLG00000017208	ssb	100	68.317	Oryzias_latipes
ENSELUG00000020929	ssb	100	66.420	ENSORLG00020022574	ssb	100	68.148	Oryzias_latipes_hni
ENSELUG00000020929	ssb	100	66.832	ENSORLG00015016592	ssb	100	68.317	Oryzias_latipes_hsok
ENSELUG00000020929	ssb	100	68.238	ENSOMEG00000003193	ssb	100	68.486	Oryzias_melastigma
ENSELUG00000020929	ssb	100	56.532	ENSOGAG00000029768	SSB	98	55.875	Otolemur_garnettii
ENSELUG00000020929	ssb	100	60.049	ENSOARG00000002906	SSB	98	59.553	Ovis_aries
ENSELUG00000020929	ssb	98	45.960	ENSPPAG00000006189	-	77	50.165	Pan_paniscus
ENSELUG00000020929	ssb	100	52.580	ENSPPAG00000032427	-	94	62.295	Pan_paniscus
ENSELUG00000020929	ssb	100	59.512	ENSPPAG00000042673	SSB	98	59.012	Pan_paniscus
ENSELUG00000020929	ssb	100	59.360	ENSPPRG00000006599	SSB	98	58.853	Panthera_pardus
ENSELUG00000020929	ssb	100	59.360	ENSPTIG00000011021	SSB	96	58.853	Panthera_tigris_altaica
ENSELUG00000020929	ssb	100	59.512	ENSPTRG00000012620	SSB	98	59.012	Pan_troglodytes
ENSELUG00000020929	ssb	100	49.877	ENSPTRG00000042880	-	99	49.261	Pan_troglodytes
ENSELUG00000020929	ssb	100	60.294	ENSPANG00000007440	SSB	98	59.801	Papio_anubis
ENSELUG00000020929	ssb	99	40.741	ENSPANG00000031877	-	90	40.209	Papio_anubis
ENSELUG00000020929	ssb	99	44.527	ENSPANG00000034126	-	77	47.385	Papio_anubis
ENSELUG00000020929	ssb	100	74.378	ENSPKIG00000019325	ssb	99	71.393	Paramormyrops_kingsleyae
ENSELUG00000020929	ssb	100	62.836	ENSPSIG00000002265	SSB	93	62.836	Pelodiscus_sinensis
ENSELUG00000020929	ssb	80	67.601	ENSPMGG00000020075	ssb	91	63.068	Periophthalmus_magnuspinnatus
ENSELUG00000020929	ssb	80	51.090	ENSPMAG00000002982	ssb	75	50.920	Petromyzon_marinus
ENSELUG00000020929	ssb	94	61.039	ENSPCIG00000028591	-	99	60.488	Phascolarctos_cinereus
ENSELUG00000020929	ssb	100	66.832	ENSPFOG00000009650	ssb	100	69.307	Poecilia_formosa
ENSELUG00000020929	ssb	100	66.005	ENSPLAG00000020498	ssb	100	69.212	Poecilia_latipinna
ENSELUG00000020929	ssb	100	69.307	ENSPMEG00000001051	ssb	100	69.059	Poecilia_mexicana
ENSELUG00000020929	ssb	93	67.914	ENSPREG00000003708	ssb	98	70.400	Poecilia_reticulata
ENSELUG00000020929	ssb	100	60.049	ENSPPYG00000012919	SSB	98	59.553	Pongo_abelii
ENSELUG00000020929	ssb	95	56.477	ENSPCAG00000010276	SSB	99	56.218	Procavia_capensis
ENSELUG00000020929	ssb	100	53.922	ENSPCOG00000023189	-	98	53.350	Propithecus_coquereli
ENSELUG00000020929	ssb	100	57.598	ENSPCOG00000015741	-	98	56.824	Propithecus_coquereli
ENSELUG00000020929	ssb	87	62.286	ENSPVAG00000006615	SSB	87	65.798	Pteropus_vampyrus
ENSELUG00000020929	ssb	100	65.672	ENSPNYG00000006444	ssb	100	65.423	Pundamilia_nyererei
ENSELUG00000020929	ssb	100	68.550	ENSPNAG00000011708	ssb	100	66.339	Pygocentrus_nattereri
ENSELUG00000020929	ssb	100	53.207	ENSRNOG00000007998	Ssb	80	58.383	Rattus_norvegicus
ENSELUG00000020929	ssb	91	56.676	ENSRNOG00000011606	AABR07061825.1	82	58.133	Rattus_norvegicus
ENSELUG00000020929	ssb	100	51.942	ENSRBIG00000041972	SSB	85	68.468	Rhinopithecus_bieti
ENSELUG00000020929	ssb	87	54.830	ENSRBIG00000041608	-	94	53.561	Rhinopithecus_bieti
ENSELUG00000020929	ssb	94	52.632	ENSRBIG00000041232	-	98	51.587	Rhinopithecus_bieti
ENSELUG00000020929	ssb	99	45.297	ENSRBIG00000029918	-	98	44.554	Rhinopithecus_bieti
ENSELUG00000020929	ssb	87	58.523	ENSRROG00000034102	-	85	58.120	Rhinopithecus_roxellana
ENSELUG00000020929	ssb	99	50.000	ENSRROG00000007149	-	98	49.257	Rhinopithecus_roxellana
ENSELUG00000020929	ssb	100	60.294	ENSRROG00000040346	SSB	98	59.801	Rhinopithecus_roxellana
ENSELUG00000020929	ssb	99	53.652	ENSRROG00000031684	-	99	52.658	Rhinopithecus_roxellana
ENSELUG00000020929	ssb	100	59.804	ENSSBOG00000027204	SSB	98	59.305	Saimiri_boliviensis_boliviensis
ENSELUG00000020929	ssb	100	60.000	ENSSHAG00000018062	SSB	99	60.591	Sarcophilus_harrisii
ENSELUG00000020929	ssb	100	74.010	ENSSFOG00015000550	ssb	99	74.010	Scleropages_formosus
ENSELUG00000020929	ssb	100	67.082	ENSSMAG00000013885	ssb	99	72.043	Scophthalmus_maximus
ENSELUG00000020929	ssb	100	72.457	ENSSDUG00000020117	ssb	100	72.457	Seriola_dumerili
ENSELUG00000020929	ssb	100	70.075	ENSSLDG00000002525	ssb	100	69.825	Seriola_lalandi_dorsalis
ENSELUG00000020929	ssb	95	54.545	ENSSARG00000007747	SSB	99	54.286	Sorex_araneus
ENSELUG00000020929	ssb	100	62.654	ENSSPUG00000012112	SSB	99	62.500	Sphenodon_punctatus
ENSELUG00000020929	ssb	100	72.139	ENSSPAG00000005696	ssb	100	69.403	Stegastes_partitus
ENSELUG00000020929	ssb	96	56.736	ENSSSCG00000015938	SSB	94	57.330	Sus_scrofa
ENSELUG00000020929	ssb	99	60.784	ENSTGUG00000007942	SSB	99	62.500	Taeniopygia_guttata
ENSELUG00000020929	ssb	100	67.990	ENSTRUG00000017839	ssb	100	67.990	Takifugu_rubripes
ENSELUG00000020929	ssb	91	68.219	ENSTNIG00000000915	ssb	94	72.917	Tetraodon_nigroviridis
ENSELUG00000020929	ssb	82	68.696	ENSTBEG00000009056	SSB	81	68.696	Tupaia_belangeri
ENSELUG00000020929	ssb	100	59.951	ENSTTRG00000002152	SSB	98	58.209	Tursiops_truncatus
ENSELUG00000020929	ssb	91	62.228	ENSUAMG00000027833	SSB	95	61.708	Ursus_americanus
ENSELUG00000020929	ssb	100	59.360	ENSUMAG00000013907	SSB	98	58.853	Ursus_maritimus
ENSELUG00000020929	ssb	100	59.951	ENSVPAG00000007183	SSB	98	59.453	Vicugna_pacos
ENSELUG00000020929	ssb	100	59.360	ENSVVUG00000016573	SSB	76	58.853	Vulpes_vulpes
ENSELUG00000020929	ssb	99	54.439	ENSXETG00000025402	ssb	99	54.439	Xenopus_tropicalis
ENSELUG00000020929	ssb	94	65.172	ENSXCOG00000019109	ssb	99	67.810	Xiphophorus_couchianus
ENSELUG00000020929	ssb	100	67.241	ENSXMAG00000004888	ssb	100	69.704	Xiphophorus_maculatus